Gchil4149.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil4149.t1
Unique NameGchil4149.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length316
Homology
BLAST of Gchil4149.t1 vs. uniprot
Match: S0F3L4_CHOCR (Uncharacterized protein n=2 Tax=Chondrus crispus TaxID=2769 RepID=S0F3L4_CHOCR)

HSP 1 Score: 219 bits (557), Expect = 3.660e-66
Identity = 125/300 (41.67%), Postives = 168/300 (56.00%), Query Frame = 0
Query:   12 LFYVGLSHRIRLPPNTQVEGVAHVAGSLFFAGDFRRGAILLIDFATGFTTTVVPANANRLATGLTARNGSVFVAGGGIF--GVFTSPPRMFVYDILSGNTVAACDAPLGALVNDVTADDDFAYYTDSFLGKVYMLRLATLPQCDLSVLSLPPQLFAPGPPFLTTNGIRRFASGLVVANSNLGSLFFVD-LSTNSTQQITPNDAVVGAGGLELSQDKNGSGATLFVAQSTLSIVSIWRLWKTGKDVKARFVQNITYPEFETPGTVALGDGRLVVGDPKFETYTLTNDLPDGAELALFGFRI 308
            LF + L+ +  LP   Q EGV    GS +FA D R G+I L+D A+G  TT V     R+  G+ A    +FVAGGG F  GV    P + VYDI +G  +A C    G+LVNDV AD DFA+YTDSF G VY L ++ LP+C    + LP   F P       NGI ++  GL+VANS L + FF+D L+ N  Q+I PN    G  GL++ + K GS   L+V Q++L+ VS+W+L   G+ V A+FV+NIT   F  P TVA+    LVV +  F +   T  + D   L +    I
Sbjct:   14 LFPLSLATQFPLPSGVQPEGVTFARGSNYFAADIRSGSIFLVDVASGLVTTAVAPIPGRIGGGIDASKDRLFVAGGGSFLPGV---EPALHVYDIPTGTPIATCPTGGGSLVNDVIADKDFAFYTDSFRGVVYKLSISALPRCRFETIPLPTPAFKPEAGVFRANGIVKYKGGLIVANSELAAPFFIDILNGNKAQRILPNGTTEGIDGLDIVRMKGGS--LLYVTQNSLNRVSVWKLSIRGRRVSAKFVKNITSSGFNVPTTVAVKKNTLVVANAAFGSVPPTGPIDDDVRLNITAIHI 308          
BLAST of Gchil4149.t1 vs. uniprot
Match: R7QCK1_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QCK1_CHOCR)

HSP 1 Score: 215 bits (548), Expect = 7.300e-65
Identity = 123/303 (40.59%), Postives = 175/303 (57.76%), Query Frame = 0
Query:    8 FILSLFYVGLSHRIRLPPNTQVEGVAHVAGSLFFAGDFRRGAILLIDFATGFTTTVVPANANRLATGLTARNGSVFVAGGGIFGVFTSPPRMFVYDILSGNTVAACDA-PLGALVNDVTADDDFAYYTDSFLGKVYMLRLATLPQCDLSVLSLPPQLFAPGPPFLTTNGIRRFASGLVVANSNLGSLFFVDL-STNSTQQITPNDAVVGAGGLELSQDKNGSGATLFVAQSTLSIVSIWRLWK-TGKDVKARFVQNITYPEFETPGTVALGDGRLVVGDPKFETYTLTNDLPDGAELALFGFR 307
            F++SL  +  +  I  PP  QVEGVAH AG+ F   D R G I L D +T   T  V A  NR + G+ +R G +F AGGG    F     ++VYD  +GN +AAC      ALVNDV AD D+AYYTDS LG++Y L LA LP+CD+  + LP  LF       + NG+ ++  G+++ + +LG++FFVDL + N  QQI P  +++GA GL++ + K GS   LFVAQ+  +++S WRL     + V A F++  + P+F  P TVA+    +V    +F+T      +PD   L L  FR
Sbjct:    7 FLISLLPLFRATFIPHPPQVQVEGVAHAAGTNFLFADLRTGDIYLADVSTRLVTRAVRAPPNRTSVGIHSRKGRIFAAGGGA--PFFPVANLYVYDTATGNEIAACPVRDENALVNDVIADRDYAYYTDSLLGRIYKLSLAKLPECDIDTIHLPQPLFKSD--LASANGLVKYKGGIILVHLDLGTIFFVDLLNRNRVQQILPPGSMLGADGLDIDRKKGGS--LLFVAQNRENLISQWRLGMGDDRKVSAVFLRKYSSPQFGFPTTVAVTGDYIVAPTSRFDTVEFAEPIPDNVTLGLVVFR 303          
BLAST of Gchil4149.t1 vs. uniprot
Match: A0A0Q9LL58_9MICO (Uncharacterized protein n=1 Tax=Phycicoccus sp. Soil748 TaxID=1736397 RepID=A0A0Q9LL58_9MICO)

HSP 1 Score: 94.7 bits (234), Expect = 9.980e-19
Identity = 90/273 (32.97%), Postives = 131/273 (47.99%), Query Frame = 0
Query:   21 IRLPPNTQVEGVAHVAGSLFFAGDFRRGAILLIDFATGFTTTVVPANANRLATGLTA--RNGSVFVAGGGIFGVFTSPPRMFVYDILSGNTVAACD-APLGALVNDVTADDDFAYYTDSFLGKVYMLRLATLPQCDLSVLSLPPQLFAPGPPFLTTNGIRRFASG--LVVANSNLGSLFFVDLSTNSTQQITPNDAVVGAGGLELSQDKNGSGATLFVAQSTLSIVSIWRLWKTGKDVKARFVQNITYPEFETPGTVALGDGRLVVGDPKFET 288
            I LP  T  EGVA  AGS F+AGD   G +   D   G  T  V A A R ATG+ A  R+  +FVAGG          + +VY  L+G  VA+   A     +NDV   D  A++TDS    +Y + +        S L L          F  +NGI+  A G  L+VA+S  G++  V+  T +++ I    +V    G+ L       G TL+V ++  ++V   +L    +      ++ IT   FETP TVAL  G+++V + KF+T
Sbjct:   38 ITLPGATGTEGVAKGAGSTFYAGDLLTGDVYRGDARHGTATKFVHAPAGRFATGMKADLRHHLLFVAGG-------PTGQGYVYSTLTGAPVASYTFAVAPTFINDVALTDAGAWFTDSSRAVLYFVPVRGGSPRAFSTLHLSGPAADLSGAF-NSNGIQATADGSRLLVAHSGQGAVNVVNPRTGASRAIA-GLSVPNVDGILLD------GRTLWVVRNNDNLVVKAQLSDGLRS--GTVLRTITSSLFETPTTVALVAGKVLVANAKFDT 293          
BLAST of Gchil4149.t1 vs. uniprot
Match: A0A7H8MCW6_9ACTN (Superoxide dismutase n=2 Tax=Actinomadura sp. NAK00032 TaxID=2742128 RepID=A0A7H8MCW6_9ACTN)

HSP 1 Score: 92.0 bits (227), Expect = 1.060e-17
Identity = 86/278 (30.94%), Postives = 123/278 (44.24%), Query Frame = 0
Query:   21 IRLPPNTQVEGVAHVAGSLFFAGDFRRGAILLIDFATGFTTTVVPANANRLATGL-TARNGSVFVAGGGIFGVFTSPPRMFVYDILSGNTVAACDAPLG-ALVNDVTADDDFAYYTDSFLGKVYMLRL--ATLPQCDLSVLSLPPQLFA--PGPPF---LTTNGIRRFASG--LVVANSNLGSLFFVDLSTNSTQQITPNDAVVGAG-GLELSQDKNGSGATLFVAQSTLSIVSIWRLWKTGKDVKARFVQNITYPEFETPGTVALGDGRLVVGDPKF 286
            IRLP   Q EG+    G   + G    G++   D  TG    ++       A GL T R G +FVAGG       +     V D+ SG  +A+     G A +NDV      A++TDS    +Y L L    LP   + +      ++   PG P       NGI     G  L+V  SN G+LF VD +T  T ++  +   +  G GL L       G TL+  Q+ L+ V++ RL   G D   R V+ +  P F+ P TVA    RL + + +F
Sbjct:   38 IRLPNGFQPEGITTGPGPFAYVGSMADGSVYRADLRTG-RGAILSRGPGTPALGLKTDRRGRLFVAGG-------TGGDARVIDVRSGRVLASYRLATGPAFINDVILTQGAAWFTDSTNPVLYKLPLRGGRLPSAAIRIPLTGDLVYQGDPGSPDSSGFNANGITPTPDGRGLIVVQSNTGTLFRVDPATGETHRVNLHGESLPEGDGLLLR------GRTLYAVQNRLNTVAVLRLNTAGTD--GRVVRRVKDPRFDLPTTVAAFGSRLYLSNIQF 299          
BLAST of Gchil4149.t1 vs. uniprot
Match: UPI001E4FFCF5 (superoxide dismutase n=1 Tax=Micromonospora sp. TP-A0468 TaxID=1182970 RepID=UPI001E4FFCF5)

HSP 1 Score: 85.1 bits (209), Expect = 2.830e-15
Identity = 85/281 (30.25%), Postives = 121/281 (43.06%), Query Frame = 0
Query:   16 GLSHRIRLPPNTQVEGVAHVAGSLFFAGDFRRGAILLIDFATGFTTTVVPANANRLATGLTARNGSVFVAGGGIFGVFTSPPRMFVYDILSGNTVAACD-APLGALVNDVTADDDFAYYTDSFLGKVYMLRLAT---LPQCDLSVLSLP-PQLFAPGPPFLTTNGIRRF--ASGLVVANSNLGSLFFVDLSTNSTQQI-TPNDAVVGAGGLELSQDKNGSGATLFVAQSTLSIVSIWRLWKTGKDVKARFVQNITYPEFETPGTVALGDGRLVVGDPKFET 288
            G    I LP   Q EG+A  AG   + G    GAI   D   G    + PA           R G +FVAGG       +     V D  +G  +A+   A     VNDV   +  AY TDS+   +Y L L     LP  + +V ++P    F      +  NGI      +GL+V  SN G+LF VD +T +T  +  P  +     GL  +      G TL+V ++ L+ +++ RL + G          IT   F+ P TVA   GRL + + +F T
Sbjct:   31 GRPDVIALPDGFQPEGIA-TAGRYAYLGSRATGAIYRADLTDGTGELLSPATGTPSLGLKVDRRGRLFVAGG-------TGGDARVVDTRTGRVLASYRLAAAPTFVNDVVLTERAAYLTDSYRPVLYRLPLGRDGRLPSAN-AVTTIPLTGEFQQVDGAINLNGIVATPDGAGLIVVQSNTGTLFRVDPATGATTAVDVPGQSFTSGDGLLRA------GRTLYVVRNRLNEIAVVRLDRAG--TAGTPAGTITDGAFDVPTTVAAAHGRLYLPNARFTT 294          
BLAST of Gchil4149.t1 vs. uniprot
Match: A0A7W0SQI6_9ACTN (Uncharacterized protein (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7W0SQI6_9ACTN)

HSP 1 Score: 69.7 bits (169), Expect = 9.160e-11
Identity = 44/129 (34.11%), Postives = 66/129 (51.16%), Query Frame = 0
Query:   21 IRLPPNTQVEGVAHVAGSLFFAGDFRRGAILLIDFATGFTTTVVPANANRLATGLTA--RNGSVFVAGGGIFGVFTSPPRMFVYDILSGNTVAACDAPLGALVNDVTADDDFAYYTDSFLGKVYMLRLA 147
            I LP  +  EG+A   G+ F+AGD                   + A A+R+A G+ A   +  +FVAGG     FT   + +VYD ++G TVA    P GA+VNDV      A++TDSF  ++Y + ++
Sbjct:   36 IVLPGASSAEGIAAGGGTTFYAGDLFXXXXXXXXXXXXTAELFIDAPADRMAVGMAADLEHDLLFVAGG-----FTG--QAYVYDTVTGATVATYQFPAGAMVNDVALTKAGAWFTDSFQPRLYFVPVS 157          
BLAST of Gchil4149.t1 vs. uniprot
Match: A0A1Q5KLH8_9ACTN (Superoxide dismutase n=1 Tax=Streptomyces sp. TSRI0107 TaxID=1703942 RepID=A0A1Q5KLH8_9ACTN)

HSP 1 Score: 69.3 bits (168), Expect = 9.620e-10
Identity = 80/278 (28.78%), Postives = 120/278 (43.17%), Query Frame = 0
Query:   20 RIRLPPNTQVEGVAHVAGSLFFAGDFRRGAILLIDFATGFTTTVVPA-NANRLATGLTA-RNGSVFVAGGGIFGVFTSPPRMFVYDILSGNTVAACDAPLGALVNDVTADDDFAYYTDSFLGKVYMLRLAT--LPQCDLSVLSLPPQLFAPGPPFLTTNGIRRFASG--LVVANSNLGS--LFFVDLSTNSTQQITPNDAVVGAG-GLELSQDKNGSGATLFVAQSTLSIVSIWRLWKTGKDVKARFVQNITYPE-FETPGTVALGDGRLVVGDPKFE 287
            R  LP   Q EG+A  +    + G    G +     ATG    V      +R   GL   R+G +F++GG       +   +   D  +G      +   GA VNDV      A++TDSFL ++Y L L     PQ  +  + L    +  GP F T NGI R   G  L+V N+  G   L  VD  T S   +    A++  G GL L       G TL+V Q   + + ++RL  +G   +   +  +T P+ F  P T A    R+ + + +F+
Sbjct:   43 RFPLPDGFQPEGIAIGSEPYAWFGSLANGDVYRASLATGRGRVVHRGLGPDRPVVGLKIDRHGRLFLSGG-------AGGDLRTVDARTGEIEQVHEVG-GAFVNDVVLTPRAAWFTDSFLPRLYRLDLGRDGAPQ-GVETVPLSGD-WEQGPDF-TANGIERTPDGSALLVVNAFAGGGGLMRVDPRTGSASAVDLGGALLPNGDGLLLL------GRTLYVVQQWQNAIDVFRLNSSG--TRGSLITRVTDPDRFRIPTTAAAWGDRIYLPNARFD 301          
The following BLAST results are available for this feature:
BLAST of Gchil4149.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
S0F3L4_CHOCR3.660e-6641.67Uncharacterized protein n=2 Tax=Chondrus crispus T... [more]
R7QCK1_CHOCR7.300e-6540.59Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A0Q9LL58_9MICO9.980e-1932.97Uncharacterized protein n=1 Tax=Phycicoccus sp. So... [more]
A0A7H8MCW6_9ACTN1.060e-1730.94Superoxide dismutase n=2 Tax=Actinomadura sp. NAK0... [more]
UPI001E4FFCF52.830e-1530.25superoxide dismutase n=1 Tax=Micromonospora sp. TP... [more]
A0A7W0SQI6_9ACTN9.160e-1134.11Uncharacterized protein (Fragment) n=1 Tax=Actinom... [more]
A0A1Q5KLH8_9ACTN9.620e-1028.78Superoxide dismutase n=1 Tax=Streptomyces sp. TSRI... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011042Six-bladed beta-propeller, TolB-likeGENE3D2.120.10.30coord: 21..243
e-value: 4.6E-9
score: 37.5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..315
NoneNo IPR availableSUPERFAMILY101898NHL repeatcoord: 24..283

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004373_piloncontigtig00004373_pilon:1036206..1037153 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil4149.t1Gchil4149.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004373_pilon 1036206..1037153 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil4149.t1 ID=Gchil4149.t1|Name=Gchil4149.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=316bp
MHATLAVFILSLFYVGLSHRIRLPPNTQVEGVAHVAGSLFFAGDFRRGAI
LLIDFATGFTTTVVPANANRLATGLTARNGSVFVAGGGIFGVFTSPPRMF
VYDILSGNTVAACDAPLGALVNDVTADDDFAYYTDSFLGKVYMLRLATLP
QCDLSVLSLPPQLFAPGPPFLTTNGIRRFASGLVVANSNLGSLFFVDLST
NSTQQITPNDAVVGAGGLELSQDKNGSGATLFVAQSTLSIVSIWRLWKTG
KDVKARFVQNITYPEFETPGTVALGDGRLVVGDPKFETYTLTNDLPDGAE
LALFGFRIRRARHSK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0110426-blade_b-propeller_TolB-like