Gchil4244.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil4244.t1
Unique NameGchil4244.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length368
Homology
BLAST of Gchil4244.t1 vs. uniprot
Match: A0A2V3J159_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J159_9FLOR)

HSP 1 Score: 439 bits (1130), Expect = 4.510e-150
Identity = 235/365 (64.38%), Postives = 282/365 (77.26%), Query Frame = 0
Query:    2 APVYSANVVGLGQIAPPKAPASRVPSAAGSAASSHRSSAVSSVSLGSLGAASSTXXXXXXXXXXXXXXXXXXXXXDMDMSMDAFRDGALESSARAAAKQKGKLRKDRSFEFLEHVETAFDSDDDMPDDAFDNRNCEIAPYAGHLTDEGILLPVSLPGLRDMPQHFADFVEDDLVSDLHKLGNGFDSLFPTAKAEPKAEPMAIEQPAASQLSTAEILNSDMFTEGTVARKLLSSESSLAFLQLPGLLTLSENPTAANIGEEQRPHEPSKQTSVAAAVTAGERMRGLGTDLRRVGEPGTAQFMGKLRFFKSGRVQLVMQCGDVIDLEHGVEPKVCQQVVLVDKTQKSCDEMSNGYMPKVVGIPSLGL 366
            APVYS NVVGLGQIAPPKAP SRVPS+AGSAASSHRSSAVSS+SLGSLGAASST                     DMD++M A ++  L+S+A   +KQKGK +KDR  +F EH+ET +DSDDDM DD+F+ RN +IAPYAGHLT++GIL PVSLPGLRD+P  F +F++  ++  + K       L    K E KAEPM  E    +  ST + LN   F +GTVA+KLL+SE+SL F+QLPGLLT++EN  A NIGEEQRPHEPS Q+SVAAAV+AGERMR LGTDLRRVGEPG +Q++GKLRFFKSGRVQLVMQCG+VIDLE+GVEPKVCQQV+L+D  +K+CDEMSNGY+PKVVG+PSLGL
Sbjct:   87 APVYSPNVVGLGQIAPPKAPVSRVPSSAGSAASSHRSSAVSSISLGSLGAASSTGAASSSTGIGFPDGAI-----DMDVAMAAMKEEGLDSTA-GVSKQKGKAKKDREMKFEEHIETGYDSDDDMSDDSFEQRNRDIAPYAGHLTEDGILFPVSLPGLRDLPPCFEEFIDGPMIPKVTKDKTDEHMLITETKPEAKAEPMQFET---NDFSTVQPLNPKSFADGTVAKKLLASEASLVFMQLPGLLTINENSAAGNIGEEQRPHEPSMQSSVAAAVSAGERMRALGTDLRRVGEPGKSQYIGKLRFFKSGRVQLVMQCGEVIDLENGVEPKVCQQVLLIDTGKKTCDEMSNGYLPKVVGVPSLGL 442          
BLAST of Gchil4244.t1 vs. uniprot
Match: R7Q7U5_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q7U5_CHOCR)

HSP 1 Score: 228 bits (580), Expect = 2.620e-69
Identity = 130/261 (49.81%), Postives = 170/261 (65.13%), Query Frame = 0
Query:  112 FLEHVETAFDSDDDMPDDAFDNRNCEIAPYAGHLTDEGILLPVSLPGLRDMPQHFADFVEDDL---VSDLHKLGNGFDSLFPTAKAEPKAEPMAIEQPAASQLSTAEILNSDMFTEGTVARKLLSSESSLAFLQLPGLLTLSE--NPTAANIGEEQRPHEPSKQTSVAAAVTAGERMRGLGTDLRRVGEPGTAQFMGKLRFFKSGRVQLVMQCGDVIDLEHGVEPKVCQQVVLVDKTQKSCDEMSNGYMPKVVGIPSLGLA 367
            F+EH+E A DSDDDM + +F+ RN +IAPYAG LT +G+LLPVSLPGLRD+P  + DF        VSD  + G    S         K EPM I+       + A  L  +MF +G+VARK+LSS  SL F+QLPGLL L E  +    +  + Q P     ++SVAAAV A ERMRGLGTDLR+VGE G+ + +GKLRFFKSGRVQ+VM  G  I+LEHG+ PKV QQVV++D  ++ C+E+ N    ++VG+P+ G A
Sbjct:   27 FMEHLEVADDSDDDMMETSFEARNKDIAPYAGKLTRDGLLLPVSLPGLRDLPPEYRDFESKGAHIDVSDDDEEGVTLGS---------KEEPMEIDAIDDGD-NDAGNLRPEMFAKGSVARKVLSSHDSLTFMQLPGLLALMERKDTDGTSKNDRQEPEHDKVESSVAAAVAAAERMRGLGTDLRKVGERGSTRPVGKLRFFKSGRVQMVMGRGGCIELEHGISPKVTQQVVMIDTERQKCEELQNTLTSRLVGVPTFGPA 277          
The following BLAST results are available for this feature:
BLAST of Gchil4244.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J159_9FLOR4.510e-15064.38Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q7U5_CHOCR2.620e-6949.81Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004373_piloncontigtig00004373_pilon:1653469..1654572 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil4244.t1Gchil4244.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004373_pilon 1653469..1654572 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil4244.t1 ID=Gchil4244.t1|Name=Gchil4244.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=368bp
MAPVYSANVVGLGQIAPPKAPASRVPSAAGSAASSHRSSAVSSVSLGSLG
AASSTGALSSTGAPSSSAGMAHAASMDMDMSMDAFRDGALESSARAAAKQ
KGKLRKDRSFEFLEHVETAFDSDDDMPDDAFDNRNCEIAPYAGHLTDEGI
LLPVSLPGLRDMPQHFADFVEDDLVSDLHKLGNGFDSLFPTAKAEPKAEP
MAIEQPAASQLSTAEILNSDMFTEGTVARKLLSSESSLAFLQLPGLLTLS
ENPTAANIGEEQRPHEPSKQTSVAAAVTAGERMRGLGTDLRRVGEPGTAQ
FMGKLRFFKSGRVQLVMQCGDVIDLEHGVEPKVCQQVVLVDKTQKSCDEM
SNGYMPKVVGIPSLGLA*
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