Gchil4274.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil4274.t1
Unique NameGchil4274.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length334
Homology
BLAST of Gchil4274.t1 vs. uniprot
Match: A0A2V3J154_9FLOR (Endoplasmic reticulum vesicle protein 25 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J154_9FLOR)

HSP 1 Score: 322 bits (824), Expect = 1.200e-106
Identity = 171/283 (60.42%), Postives = 221/283 (78.09%), Query Frame = 0
Query:   54 MPVDIKVSINDGSKTLYEKQDANHGKFAFVVPFPEGAQGDIKVSTAEATRK-LKEAENHVHESLKKDKEERDENLHERLADHHRRRVLSAG--DSSKKGERFDHNGNFGYNYDYEDSLNDFDMDKYNGIRDEQFDDEIAKNEREHERKYGTIDTASVHDKEEQLFQVQKFEVCISSNVEKQEIKRRIRLLINKGETAHDFNRLAKKEHLTHLEVSLRHVSAELNELLHVLEEVRQMEDVLRKLNENTNKRVVVLSVIALVSLFGVAGYQALYTKNFFKRKKIL 333
            MPVDI V++N+  KTL  +Q+ +HGKFAFVVP+PEG   DIKV++AEA RK +++   H++E   +  E+       R  +HHRR VLS     S++ G   DH  +  Y Y Y+D+L+DFDM    GI D+  +DE+A+N+REH +++G ID A+  +KEEQLFQ+QKFE+C+S+NVEKQ+IKRR+RL+IN+GE AHDF RLAKKEHLTHLEVSLRHVS+ELNELLHVLEE R+MED+LRK+NENTNKRVV+LSV++L+SLF V GYQA+YTK FFKRKKIL
Sbjct:    1 MPVDITVTVNNAQKTLLSRQNVDHGKFAFVVPYPEGMLNDIKVASAEAHRKKMRDLGKHINERTAQINEDAS-----RKVEHHRRHVLSVDKPSSNEGGAHRDHPHHDYYGYGYDDNLDDFDMXXXXGINDDSLEDELARNQREHMKQFGAIDAATDQEKEEQLFQLQKFEICVSTNVEKQDIKRRVRLIINRGEAAHDFTRLAKKEHLTHLEVSLRHVSSELNELLHVLEEAREMEDILRKMNENTNKRVVLLSVMSLISLFAVGGYQAVYTKKFFKRKKIL 278          
BLAST of Gchil4274.t1 vs. uniprot
Match: Q7XYZ8_GRIJA (Transmembrane protein Tmp21 (Fragment) n=1 Tax=Griffithsia japonica TaxID=83288 RepID=Q7XYZ8_GRIJA)

HSP 1 Score: 123 bits (309), Expect = 3.020e-31
Identity = 67/123 (54.47%), Postives = 92/123 (74.80%), Query Frame = 0
Query:  209 DKEEQLFQVQKFEVCISSNVEKQEIKRR-IRLLINKGETAHDFNRLAKKEHLTHLEVSLRHVSAELNELLHVLEEVRQMEDVLRKLNENTNKRVVVLSVIALVSLFGVAGYQALYTKNFFKRK 330
            D+E+QLF   +FE+C+SS+  K   KRR ++L ++KGE AHDF RLAK EH++HLEVSL+ +S EL +L++ L+  + M+D L +LNE T +RVVV+S+I+L SL  VA YQA YTK F KRK
Sbjct:    6 DREKQLFDAVRFELCVSSSEHKNGAKRRRVKLAVHKGEGAHDFTRLAKIEHMSHLEVSLKQISDELQQLMYQLDHAQGMQDFLYRLNEGTKQRVVVMSIISLASLVSVAMYQASYTKRFLKRK 128          
BLAST of Gchil4274.t1 vs. uniprot
Match: A0A7S1ERJ8_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ERJ8_9RHOD)

HSP 1 Score: 95.9 bits (237), Expect = 1.680e-19
Identity = 55/129 (42.64%), Postives = 83/129 (64.34%), Query Frame = 0
Query:  207 VHDKEEQLFQVQKFEVCISSNV---EKQEIKRRIRLLINKGETAHDFNRLAKKEHLTHLEVSLRHVSAELNELLHVLEEVRQMEDVLRKLNENTNKRVVVLSVIALVSLFGVAGYQALYTKNFFKRKKI 332
            ++D++E L+   K+++C+SS          KRR+ L ++ G  A D+ +LAK+EHL  LEV+LR +  EL  L+  L  VR  ED LR +NE TN+RV+  S I+ V + GV GYQ +Y +NFF++KK+
Sbjct:  114 IYDEDEDLWVPPKYQICVSSKRVPGSDARQKRRVTLNLHSGAAARDYGQLAKEEHLDELEVALRGMYDELTNLMSELAYVRDREDALRGINEATNRRVLWYSAISCVIMVGVGGYQMVYMRNFFRKKKL 242          
BLAST of Gchil4274.t1 vs. uniprot
Match: A0A183BTL6_GLOPA (GOLD domain-containing protein n=1 Tax=Globodera pallida TaxID=36090 RepID=A0A183BTL6_GLOPA)

HSP 1 Score: 71.6 bits (174), Expect = 5.940e-11
Identity = 41/116 (35.34%), Postives = 70/116 (60.34%), Query Frame = 0
Query:  220 FEVCISSN--VEKQEIKRRIRLLINKGETAHDFNRLAKKEHLTHLEVSLRHVSAELNELLHVLEEVRQMEDVLRKLNENTNKRVVVLSVIALVSLFGVAGYQALYTKNFFKRKKIL 333
            FE+C   +    +Q+I R + L++  G  A ++  LAK E L  LEV LR +    + ++     +RQ E+ +R  NE+TN RV+ LS+ +++ L G+A +Q LY +++FK KK++
Sbjct:  105 FEICFQMHGPTHQQKINREVNLVLKHGVEAKNYEDLAKAEKLKPLEVELRRLEDLSDSIVQDFAYMRQREEEMRDTNESTNSRVLYLSIFSMLCLLGLATWQVLYLRSYFKSKKLI 220          
BLAST of Gchil4274.t1 vs. uniprot
Match: A0A4U5NTI5_STECR (GOLD domain-containing protein n=2 Tax=Steinernema carpocapsae TaxID=34508 RepID=A0A4U5NTI5_STECR)

HSP 1 Score: 72.8 bits (177), Expect = 6.090e-11
Identity = 50/148 (33.78%), Postives = 80/148 (54.05%), Query Frame = 0
Query:  188 IAKNEREHERKYGTIDTASVHDKEEQLFQVQKFEVCISSNVEKQE--IKRRIRLLINKGETAHDFNRLAKKEHLTHLEVSLRHVSAELNELLHVLEEVRQMEDVLRKLNENTNKRVVVLSVIALVSLFGVAGYQALYTKNFFKRKKIL 333
            + K E  HE K     TA  +D          FE+CISS++   +    R + LL+  G  A ++  +AK E L  LEV LR +      +++    +R+ E+ +R  NE+TN RV+ LS+ ++V L G+A +Q LY + +FK KK++
Sbjct:  155 LYKRENFHETKGKFAFTADEYD---------IFEICISSHIPAGQHGADREVSLLLKHGVEAKNYEDIAKAEKLKPLEVELRRLEDLSESIVNDFAYMRKREEEMRSTNESTNSRVLYLSIFSMVCLIGLATWQVLYLRKYFKTKKLI 293          
BLAST of Gchil4274.t1 vs. uniprot
Match: A0A454XX83_PRIPA (GOLD domain-containing protein n=2 Tax=Pristionchus pacificus TaxID=54126 RepID=A0A454XX83_PRIPA)

HSP 1 Score: 70.9 bits (172), Expect = 8.780e-11
Identity = 40/115 (34.78%), Postives = 72/115 (62.61%), Query Frame = 0
Query:  220 FEVCISSNVEK-QEIKRRIRLLINKGETAHDFNRLAKKEHLTHLEVSLRHVSAELNELLHVLEEVRQMEDVLRKLNENTNKRVVVLSVIALVSLFGVAGYQALYTKNFFKRKKIL 333
            FE+C++++    Q  +R   L++  G  A +++ +AK EHL  LEV LR +    + ++     +RQ E+ +R  NE+TN RV+ LSV +++ L G+A +Q L+ +++FK KK++
Sbjct:   92 FEICLTNHAPAGQNTQREFSLVMKHGVEAKNYDDIAKAEHLKPLEVELRRLEDLSDAIVKDFAFMRQREEEMRNTNESTNSRVLYLSVFSMLCLLGLAAWQVLFLRSYFKAKKLI 206          
BLAST of Gchil4274.t1 vs. uniprot
Match: H2ZF49_CIOSA (GOLD domain-containing protein n=1 Tax=Ciona savignyi TaxID=51511 RepID=H2ZF49_CIOSA)

HSP 1 Score: 68.6 bits (166), Expect = 8.930e-11
Identity = 40/116 (34.48%), Postives = 68/116 (58.62%), Query Frame = 0
Query:  220 FEVCISSNVEKQEIK--RRIRLLINKGETAHDFNRLAKKEHLTHLEVSLRHVSAELNELLHVLEEVRQMEDVLRKLNENTNKRVVVLSVIALVSLFGVAGYQALYTKNFFKRKKIL 333
            F++C SS  + Q     + +RLL+ +G  A ++  LAK E L  LEV LR +      ++     +++ E+ +R  NE+TN RV+  S+ +++ L G+A +Q LY + FFK KK++
Sbjct:    2 FQICFSSKADFQGNMPAQEVRLLLKRGVEAKNYEELAKTEKLKPLEVELRRLEDLSESIVQAFGYMKKREEEMRSTNESTNSRVLYFSMFSMLCLIGLATWQVLYLRKFFKSKKLI 117          
BLAST of Gchil4274.t1 vs. uniprot
Match: A0A2A2JC28_9BILA (GOLD domain-containing protein n=1 Tax=Diploscapter pachys TaxID=2018661 RepID=A0A2A2JC28_9BILA)

HSP 1 Score: 70.5 bits (171), Expect = 1.140e-10
Identity = 40/115 (34.78%), Postives = 71/115 (61.74%), Query Frame = 0
Query:  220 FEVCISSNVEK-QEIKRRIRLLINKGETAHDFNRLAKKEHLTHLEVSLRHVSAELNELLHVLEEVRQMEDVLRKLNENTNKRVVVLSVIALVSLFGVAGYQALYTKNFFKRKKIL 333
            FE+C+S++  + +  KR + L +  G  A +++ +AK E L  LEV LR +      ++     +RQ E+ +R  NE+TN RV+ LSV +++ L G+A +Q ++ +N+FK KK++
Sbjct:   89 FEICLSNHAPQGRHEKREVSLTMKHGVEAKNYDDIAKAEKLKPLEVELRRLEDLAESIVKDFAFMRQREEEMRNTNESTNSRVLYLSVFSMLCLLGLAAWQVIFLRNYFKSKKLI 203          
BLAST of Gchil4274.t1 vs. uniprot
Match: A0A1I7ZSI5_9BILA (GOLD domain-containing protein n=1 Tax=Steinernema glaseri TaxID=37863 RepID=A0A1I7ZSI5_9BILA)

HSP 1 Score: 69.7 bits (169), Expect = 2.250e-10
Identity = 40/116 (34.48%), Postives = 70/116 (60.34%), Query Frame = 0
Query:  220 FEVCISSNVEKQE--IKRRIRLLINKGETAHDFNRLAKKEHLTHLEVSLRHVSAELNELLHVLEEVRQMEDVLRKLNENTNKRVVVLSVIALVSLFGVAGYQALYTKNFFKRKKIL 333
            FE+CISS++   +    R I L++  G  A ++  +AK E L  LE+ LR +    + ++     +R+ E+ +R  NE+TN RV+ LS+ +++ L G+A +Q LY + +FK KK++
Sbjct:   91 FEICISSHIPAGQHGADREISLILKHGVEAKNYEDIAKAEKLKPLEIELRRLEDLSDSIVQDFAYMRKREEEMRNTNESTNSRVLYLSIFSMLCLLGLATWQVLYLRRYFKTKKLI 206          
BLAST of Gchil4274.t1 vs. uniprot
Match: A0A0N5CQF8_THECL (GOLD domain-containing protein n=1 Tax=Thelazia callipaeda TaxID=103827 RepID=A0A0N5CQF8_THECL)

HSP 1 Score: 69.3 bits (168), Expect = 5.220e-10
Identity = 41/116 (35.34%), Postives = 70/116 (60.34%), Query Frame = 0
Query:  220 FEVCISSNV--EKQEIKRRIRLLINKGETAHDFNRLAKKEHLTHLEVSLRHVSAELNELLHVLEEVRQMEDVLRKLNENTNKRVVVLSVIALVSLFGVAGYQALYTKNFFKRKKIL 333
            FE+C S+++    Q  +R + L I KG  A +++ +AK E L  LE  LR +    + ++     +RQ E+ +R  NE+TN RV+ LS+ +++ L G+A +Q LY + +FK KK++
Sbjct:  126 FEMCFSTHLPPNSQGAEREVYLEIRKGVDAKNYSAIAKAEQLKPLEAELRRLEDLSDSIVQDFAYMRQREEEMRSTNESTNSRVLYLSIFSMLCLLGLAIWQVLYLRRYFKAKKLI 241          
The following BLAST results are available for this feature:
BLAST of Gchil4274.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J154_9FLOR1.200e-10660.42Endoplasmic reticulum vesicle protein 25 n=1 Tax=G... [more]
Q7XYZ8_GRIJA3.020e-3154.47Transmembrane protein Tmp21 (Fragment) n=1 Tax=Gri... [more]
A0A7S1ERJ8_9RHOD1.680e-1942.64Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A183BTL6_GLOPA5.940e-1135.34GOLD domain-containing protein n=1 Tax=Globodera p... [more]
A0A4U5NTI5_STECR6.090e-1133.78GOLD domain-containing protein n=2 Tax=Steinernema... [more]
A0A454XX83_PRIPA8.780e-1134.78GOLD domain-containing protein n=2 Tax=Pristionchu... [more]
H2ZF49_CIOSA8.930e-1134.48GOLD domain-containing protein n=1 Tax=Ciona savig... [more]
A0A2A2JC28_9BILA1.140e-1034.78GOLD domain-containing protein n=1 Tax=Diploscapte... [more]
A0A1I7ZSI5_9BILA2.250e-1034.48GOLD domain-containing protein n=1 Tax=Steinernema... [more]
A0A0N5CQF8_THECL5.220e-1035.34GOLD domain-containing protein n=1 Tax=Thelazia ca... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 98..118
NoneNo IPR availableCOILSCoilCoilcoord: 266..296
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 110..150
NoneNo IPR availablePANTHERPTHR22811:SF184TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN 10coord: 209..332
coord: 11..84
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 322..333
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..300
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..13
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 301..321
NoneNo IPR availableTMHMMTMhelixcoord: 301..323
NoneNo IPR availableTMHMMTMhelixcoord: 4..23
IPR009038GOLD domainSMARTSM01190EMP24_GP25L_2coord: 18..328
e-value: 1.0E-27
score: 108.1
IPR009038GOLD domainPFAMPF01105EMP24_GP25Lcoord: 18..328
e-value: 3.6E-29
score: 102.0
IPR015720Transmembrane emp24 domain-containing proteinPANTHERPTHR22811TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEINcoord: 209..332
coord: 11..84

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004373_piloncontigtig00004373_pilon:1790798..1791799 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil4274.t1Gchil4274.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004373_pilon 1790798..1791799 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil4274.t1 ID=Gchil4274.t1|Name=Gchil4274.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=334bp
MVVMTIAISILLGGSTSAFQFYIHAGEKRCFSESVPPNTKVLGEYTVSTG
KGHMPVDIKVSINDGSKTLYEKQDANHGKFAFVVPFPEGAQGDIKVSTAE
ATRKLKEAENHVHESLKKDKEERDENLHERLADHHRRRVLSAGDSSKKGE
RFDHNGNFGYNYDYEDSLNDFDMDKYNGIRDEQFDDEIAKNEREHERKYG
TIDTASVHDKEEQLFQVQKFEVCISSNVEKQEIKRRIRLLINKGETAHDF
NRLAKKEHLTHLEVSLRHVSAELNELLHVLEEVRQMEDVLRKLNENTNKR
VVVLSVIALVSLFGVAGYQALYTKNFFKRKKIL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009038GOLD_dom
IPR015720Emp24-like