Gchil4178.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil4178.t1
Unique NameGchil4178.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length974
Homology
BLAST of Gchil4178.t1 vs. uniprot
Match: A0A2V3J2E5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2E5_9FLOR)

HSP 1 Score: 756 bits (1953), Expect = 7.370e-258
Identity = 469/977 (48.00%), Postives = 615/977 (62.95%), Query Frame = 0
Query:    9 YTTVRIEPHCIAQKAADLPRKPQENPVVYRFPWNLLAEAVVQVAILTLAAVVSIHTRLKGFVYLFCVLAVLQLILIVSRFQKVAKGAFGRDERFRKDSSMEWVP-EASVDVSAKPNSLRSIIRKAISEELGLFRSELLCFEKLSIEREESRNLSISQALSSVNESVLTLKGDMERRDQLRPSVPYATLQELESLKTRISLFQRENASIKQQLRASQLNYEEVLRNAAKTRKETEDALFRELSTREELAIAQSRIIHLDELTDRLDHAETKNMELQEELLTRAREQERFKLSADDANRRVARVENIVNILREKLKKLSGNSPSGGQDEPVDDNLEDSEKRFWQKRLRSRGNLGRSSVVYQELLRGSKESLAKEWPSNPLGRKFSAKEEKNEAFEGLPADGGFASKDFKMLESAPNLEGARKVLGMSGVPSQGAFSFSRDEFEQSDRDTKNDTSRAENRINVNELFPEAEEVPDEFSTEVQDGLETPFEEKAEQSDSSEAQNTGIQTSKHT----RTEKTNTEGERIQSLENGSFRAGTT--SGSYMRWLEKASQQRSTPQSRTTSNLTPESNDRKPTDSSTSHFPSAGRPQSDEPIKVADQGTG---GVIEPQPQDSSRTERATIHAGSVQETIQLAENGGDRSPLFGEVDFFEEALNKDVVKGSQTPQKNTQ---SSRGPXXXXXXXXXXXXXXXXXESNKTFSTARVSPASEKASFDTVAENMTDKSKEGNAIQDDVLRASKPTQTVDPGKVNVKRGGPNSVTRIVSSKIAEAQELIEKARSDGISISHASSLLEQARSVLEECLRLNCLRPEVEATVGECLVVWAKLDLKDQRAREFIREGLQYLSRSLEAQPNDEKALFNSALCNALYGALSTHEIAVRHQYVATQQFDKLLKLNPSAQVAAYNGGLAYLYLARSNIAYEGKDRGVIEKYFKLAIERFGKGVALNPQDPRNAAYLDTARNEMENFLGREENTTL 972
            +T ++I P C+AQKAADLP++ Q +    + PW  +AEAVVQ+ IL + A +SI  R K FVYLF  +AV QL  IV+RF++        ++  +   S EW+     VD   K     S+IR+AI EE   FRS+L  F+K S+ERE++RN  +SQA+SS++ SVL+L+  +ERRDQ+RP VPYATLQELE+LK R++L++RENAS+KQQLR  Q  YEE LRNA K RK+ +DA FREL+ REELAIAQ RI+HLDELT+RLD AE ++MEL+EELL R RE+E  KLSADDANRRVARVEN+  +LREKL+K++G + +G QD   +DN++DSE+R WQ+RLR+RGNLGR+SVVYQELLRGSKESL KEWPSNPLG   S KEEKNEA EGLPADGGF+ K  +ML+SAP   G  K L MS  P++  FSFSR EFE+       D+S     I  NELFP+ +    E  +  +D     F+++    +  E   + I+  + +    R  K + +    Q L++ SF    T  S SYM WL+++S +R                        T   P    P   EP + AD  +G   G +EP   D   +   T       ET     +  D   +    D  E   N     GS   ++      SSR                         +  R S A  + +  T  E ++ K+  G+  Q+ V ++S         K NV    P+S+ +IVS+K+  A ELIEK R +GISIS ASS L+QA+++LEECLRL+ LR E+EA +GECLVVWAKLDL+D+RAR    + L+YL+R ++A PN+EKALFNSALCNAL+GALS+HE+AV HQY A QQFD+LL++NP+AQVAAYNGGLAYLYLARS +A+E   +  I+KYF+L+IERF KGV LNP D RNA+YLDTARNEM+ FL  +E T L
Sbjct:    9 HTRIQIMPLCVAQKAADLPQETQRHRTTLKIPWRTIAEAVVQLVILAVGATISIQARRKFFVYLFSFMAVPQLYFIVTRFKECGPTTARLNDGTKDAPSSEWLSGPPDVDTELKTAFAESLIRQAIVEEFVSFRSDLDHFQKSSLEREDTRNTVVSQAVSSLDASVLSLRDQLERRDQMRPEVPYATLQELETLKARLNLYERENASLKQQLRNLQFMYEETLRNADKARKDAQDASFRELTAREELAIAQIRIVHLDELTNRLDRAEARSMELEEELLDRTREKEGLKLSADDANRRVARVENVSKMLREKLQKMTGRASAGEQDALSEDNVDDSEQRLWQRRLRNRGNLGRNSVVYQELLRGSKESLIKEWPSNPLGSDAS-KEEKNEALEGLPADGGFSGKGSRMLQSAPTPGGPEKALRMSEAPAEAVFSFSRGEFEKGGI-ASTDSSTIHKTITENELFPDGKGSAQESDSADEDKDVRTFKKEELNENVPETDKSAIEGKQESGGNLRVPKASGQ---HQGLDSQSFSPNRTRSSESYMEWLQESSWKRKDG-------------------GKTKTIPRPRLPVPSEP-QSADMSSGYQKGAVEPATLDEDGSLNQTR-----SETADGISSSVDVRGIPETFDTEEGECNTANTNGSLENERTDSEDASSRAERSNHSLETDVQEQEVQSLPTSNTTAERDSQAEARVNGATHEEGLSLKAPFGD--QEKVKKSSNTRY-----KPNV----PSSIVKIVSNKVTNAHELIEKGRKEGISISEASSFLKQAKTILEECLRLSVLRMEIEAALGECLVVWAKLDLRDERARWLTWKALEYLTRCVKALPNNEKALFNSALCNALFGALSSHEVAVHHQYAAAQQFDRLLQINPNAQVAAYNGGLAYLYLARSYVAFERDKKADIQKYFELSIERFAKGVMLNPLDTRNASYLDTARNEMKGFLEGDEVTQL 944          
BLAST of Gchil4178.t1 vs. uniprot
Match: R7QBB8_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QBB8_CHOCR)

HSP 1 Score: 311 bits (798), Expect = 1.090e-86
Identity = 291/1016 (28.64%), Postives = 492/1016 (48.43%), Query Frame = 0
Query:   22 KAADLPRKPQENPVVYRFPWNLLAEAVVQVAILTLAAVVSIHTRLKGFVYLFCVLAVLQLILIVSRFQKVAK-GAFGRDERFRKDSSMEWVPEASVDVSAKPNSLR------SIIRKAISEELGLFRSELLCFEKLSIEREESRNLSISQALSSVNESVLTLKGDMERRDQLRPSVPYATLQELESLKTRISLFQRENASIKQQLRASQLNYEEVLRNAAKTRKETEDALFRELSTREELAIAQSRIIHLDELTDRLDHAETKNMELQEELLTRAREQERFKLSADDANRRVARVENIVNILREKLKKLSG---NSPSGGQDEPVDDNLEDSEKRFWQKRLRSRGNLGR-SSVVYQELLRGSKE-SLAKEWPSNPLGRKFSAKEEKNEA-FEGLPADGGFASKDFKMLESAPNLEGARKV-LGMSGVPSQGA-FSFSRDEFEQSDRDTKNDTSRAENRIN-VNELFPEAEEVPDEFSTEVQDGLETPFEEKAEQSDSSEAQNTGIQTSKHTRTEKTNTEGERIQSLENGSFRAG--TTSGSYMRWLEKASQ---------QRSTPQSRTTSNLTPE-SNDRKPTDSSTSHFP--SAGRPQSDEPIKVADQGTGGVIEPQPQDSSRTERATI-------------HAGSVQETIQL----------AENGGD-RSPLFGEVDFFEEALNKDVVKGSQ-TPQKNTQSSRGPXXXXXXXXXXXXXXXXXESN------KTFSTARVSPASEKASFDTVAENMTDKSKEGNAIQD----DVLRAS------------KPTQTVDPGKVNVKRGGPNSVTRIVSSKIAEAQELIEKARSDGISISHASSLLEQARSVLEECLRLNCLRPEVEATVGECLVVWAKLDLKDQRAREFIREGLQYLSRSLEAQPNDEKALFNSALCNALYGALSTHEIAVRHQYVATQQFDKLLKLNPSAQVAAYNGGLAYLYLARSNIAYEGKDRGVIEKYFKLAIERFGKGVALNPQDPRNAAYLDTARNEM 960
            +A   PR+ +E     R  W    E  +Q++I  LA   S+  + + F +    L + QL L + RF++  + G+F   +      + E   EA   + AK   +       + IR +I  E+ + R  +   E  +I+RE++RN SI+ AL+S++ES+  ++  +E R+Q+  + P+A + ELE+ ++R+   +RE   ++ +L+  Q N+EE  R+  + R+E ++A  +EL  R ELA   SR+  LDE+T+RL  AE +N EL+EE++ ++RE+E  + SA D+ +RV RVENI  +LREK++ ++G   +S      +P+     ++E++FWQ+RLRS  ++ R  S++YQELL    + +  KEWP +PL      +E+K +A  E LPADGGF   D    E +   +G + V  G   VP+  A FSFSR EF+ S + +      A ++   V+   P      D    E+ D        +A + D  E Q  G   S+     +TN + + ++ + N   + G        +   E+ S+         + STP    + +++ + S     +D S+++ P   +G   S +P+K  +Q    + E    D     R++                GS+ + +            +ENGG   SP   E    + A  +DV++GS  T   + QS   P                  ++      KT   A++  +S + S     + + D+ K G A+ D    DV                +  Q  D   +  KR  P     + S     A EL+++AR  G++++ +  L ++A S LE  + L   RP V+A  G  L+ WAK++L D  + + + +  +YLS SL+ +PNDE  +FN+ALC  L G+ S    A  +   A + +D+LL LN ++++ A+N GLAY+ L R  +  +  D      YF+ A+ERFG  + L P D +   YL+  + E+
Sbjct:  138 EAKQKPRRSRE-----RATWQFFTETAIQISITGLAIAASVIAKARFFAFASAFLYLPQLFLALRRFRRELEVGSFAEMD---SQGTQERRLEAMETMEAKEKQINESLLASAAIRGSIGSEVDMLRYSIEQMEISTIQREQARNRSIADALASLDESIRAVRRTVETRNQIESAAPFALVAELETSQSRLKQSEREKGELQSKLQILQANFEEAKRSGERARREADEATQKELLLRVELATVTSRLTRLDEITERLQTAELRNDELREEVVIKSREEENLRQSAADSEKRVLRVENISRVLREKMQGITGRGEHSERKRSPQPISQTEAEAEEQFWQRRLRSSASIPRPGSLLYQELLGSPSDGNYNKEWPDSPLDG--GVQEKKRQAQLENLPADGGFG--DVSTTEQSSEGDGGQSVSTGQLPVPAGDAMFSFSRGEFDSSGKPSSRTLPAAPSQEKKVDGDGPSDVPTADLTGKEIAD--------QAGRLDMLEYQVDGKLKSEAPNVTETNPD-KALEGISNFERKLGGERAISETIEATERTSETMRDEFVVGKASTPDPEPSQSISIDGSTGTSDSDDSSTNNPVIPSGGSLSLKPLKEGNQNESNLSEKSIGDQLELTRSSTLENNVSDKSNSPAAGGSLADAVSFNQDNEGSNAKSENGGVILSPDAAES---QNASTEDVLEGSSDTVTGSVQSLEMPNAGGAVLESRDTASFNGGNSVSRKVSKTDEKAQIPSSSMEESPSGRIKGVIDEEKPGAAVTDSKSNDVTNGDSSVVDKADEASLRSNQVFDRNPLQRKRPVPTPKELVDS-----ANELVKQARKRGVAVAQSDGLFQRAVSKLEAAMSLGFERPYVQAEYGGALLAWAKVNLADPASYKRLTKAQRYLSASLQTRPNDEDTVFNTALCLCLLGSTSEPRQAKDYYSRACELYDRLLGLNGTSRIGAFNCGLAYISLGRLALVDDEIDEKARIGYFETALERFGTAIELKPGDGKAQTYLEDCKREL 1124          
The following BLAST results are available for this feature:
BLAST of Gchil4178.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J2E5_9FLOR7.370e-25848.00Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QBB8_CHOCR1.090e-8628.64Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 264..284
NoneNo IPR availableCOILSCoilCoilcoord: 299..326
NoneNo IPR availableCOILSCoilCoilcoord: 198..239
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 527..588
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 502..516
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 323..342
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 445..462
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 659..717
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 607..635
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 440..744
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 69..88
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..42
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 43..62
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 89..973
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 63..68
NoneNo IPR availableTMHMMTMhelixcoord: 43..62
NoneNo IPR availableTMHMMTMhelixcoord: 69..88
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 765..951
e-value: 5.2E-8
score: 34.9
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 836..961

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004373_piloncontigtig00004373_pilon:1270446..1273367 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil4178.t1Gchil4178.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004373_pilon 1270446..1273367 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil4178.t1 ID=Gchil4178.t1|Name=Gchil4178.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=974bp
MVSTVSTDYTTVRIEPHCIAQKAADLPRKPQENPVVYRFPWNLLAEAVVQ
VAILTLAAVVSIHTRLKGFVYLFCVLAVLQLILIVSRFQKVAKGAFGRDE
RFRKDSSMEWVPEASVDVSAKPNSLRSIIRKAISEELGLFRSELLCFEKL
SIEREESRNLSISQALSSVNESVLTLKGDMERRDQLRPSVPYATLQELES
LKTRISLFQRENASIKQQLRASQLNYEEVLRNAAKTRKETEDALFRELST
REELAIAQSRIIHLDELTDRLDHAETKNMELQEELLTRAREQERFKLSAD
DANRRVARVENIVNILREKLKKLSGNSPSGGQDEPVDDNLEDSEKRFWQK
RLRSRGNLGRSSVVYQELLRGSKESLAKEWPSNPLGRKFSAKEEKNEAFE
GLPADGGFASKDFKMLESAPNLEGARKVLGMSGVPSQGAFSFSRDEFEQS
DRDTKNDTSRAENRINVNELFPEAEEVPDEFSTEVQDGLETPFEEKAEQS
DSSEAQNTGIQTSKHTRTEKTNTEGERIQSLENGSFRAGTTSGSYMRWLE
KASQQRSTPQSRTTSNLTPESNDRKPTDSSTSHFPSAGRPQSDEPIKVAD
QGTGGVIEPQPQDSSRTERATIHAGSVQETIQLAENGGDRSPLFGEVDFF
EEALNKDVVKGSQTPQKNTQSSRGPSRSQDGTSASQDESQTSESNKTFST
ARVSPASEKASFDTVAENMTDKSKEGNAIQDDVLRASKPTQTVDPGKVNV
KRGGPNSVTRIVSSKIAEAQELIEKARSDGISISHASSLLEQARSVLEEC
LRLNCLRPEVEATVGECLVVWAKLDLKDQRAREFIREGLQYLSRSLEAQP
NDEKALFNSALCNALYGALSTHEIAVRHQYVATQQFDKLLKLNPSAQVAA
YNGGLAYLYLARSNIAYEGKDRGVIEKYFKLAIERFGKGVALNPQDPRNA
AYLDTARNEMENFLGREENTTLG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf