Gchil4109.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil4109.t1
Unique NameGchil4109.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length363
Homology
The following BLAST results are available for this feature:
BLAST of Gchil4109.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 246..287
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 284..362
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 285..333
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 151..216
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 217..236
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 126..150
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..125
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 237..362

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004373_piloncontigtig00004373_pilon:804512..805600 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil4109.t1Gchil4109.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004373_pilon 804512..805600 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil4109.t1 ID=Gchil4109.t1|Name=Gchil4109.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=363bp
MDEEDARFYAVASREHDGEEAGGDDDHCAGAPIYVRMRGDAVDVINGASA
YVTSVSRGVLVGSAQRASGKLLHTLLTARDTRASVHDVPDDDQDGSSTKA
QRQATLQVTLPDARALRLETRLRLRAVSAAPLLHALLGALQTGAAALLAM
RATATDGRALRDVGEFRAACAMSRDVVAARALAVAAEAVVCRRLVSDARL
ARAPRVRWAPSRRPPPAAAAAAAAAAAAAVAVAVTARSPFVRQAQAAGAQ
AQAAGAQAQAAGAQAQAAGAQAQAAGAQAQAKGAQAQAKGDQPQGAQAQG
AQAQAKGAQAQAKGDQLQDAQAQGAQAQAKGDQPQGAQAKRAAPPSTPPP
PRKRRRKRAPLV*
back to top