Gchil7422.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7422.t1
Unique NameGchil7422.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length253
Homology
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BLAST of Gchil7422.t1 vs. uniprot
Match: A0A2V3JBE7_9FLOR (LMWPc domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3JBE7_9FLOR)

HSP 1 Score: 341 bits (874), Expect = 5.220e-116
Identity = 175/246 (71.14%), Postives = 198/246 (80.49%), Query Frame = 0 
Query:   10 SENDVPEAAFAHAHAPLPLTSKPTISPLSPRRFRPQPRACASNG---FPSSPGGLVRAWAQSRSISSTLDLTRNFVSILLLSNRCRRAAFAEKQLLKTAERYSVSRRLLVLSAGLYSDPGEVLPWKLIKAAGERDIDLSDERPCAAFNLTDLDYHDYIVVVDRSVRDKLLLMAETHAHKSGGHLYEWERKIRLLCDFENALPRQQRSAGTPLDVPSFNAGSHMDTCMDIIQGGCETIIRSLITAGL 252
            +E   P  AFAHA  PLP+ +   IS  SPRR R   ++C  N     PSSP  L+  W QSRSI STL+L++ FVSIL LSNRCRRAA+AEKQL KTAERYS+SRRLL+LSAGLYSDPGE+LPWKLI AA ERDIDLSDERPCAAF LTDLDY+DYIVV+DR+VRDKLL MAE +AH SGG LYEWERKIRLLCDFENA+PR+QRSAGTPLDVPSF   + M T M+II+ GC+TI RSLITAGL
Sbjct:    6 TEQSAPATAFAHA--PLPIKAAKWIS-TSPRRLRAPVKSCTPNNNAEIPSSPTRLLHNWTQSRSIQSTLNLSQTFVSILFLSNRCRRAAYAEKQLNKTAERYSISRRLLILSAGLYSDPGELLPWKLIAAARERDIDLSDERPCAAFTLTDLDYYDYIVVLDRNVRDKLLHMAEAYAHTSGGRLYEWERKIRLLCDFENAMPRRQRSAGTPLDVPSFRGATRMQTSMEIIEAGCDTIARSLITAGL 248
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BLAST of Gchil7422.t1 vs. uniprot
Match: R7QDQ0_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QDQ0_CHOCR)

HSP 1 Score: 155 bits (391), Expect = 9.840e-44
Identity = 82/147 (55.78%), Postives = 109/147 (74.15%), Query Frame = 0 
Query:   14 VPEAAFAHAHAPLPLTSK---PTISPLSPRRFRPQPRACASNGFPSSPGGLVRAWAQSRSISSTLDLTRNFVSILLLSNRCRRAAFAEKQLLKTAERYSVSRRLLVLSAGLYSDPGEVLPWKLIKAAGERDIDLSDERPCAAFNLTD 157
            +P AAF    APLPLT +   P   P    + RP PRA   +  P+SP  L+R+WA SR++SST+DL+R F+S+L LSN C+RAA+AEK+L + AE YSVSRRLL+LSAG+YS+PG++LP KL+ AA  + ID+SDERPCAAF ++D
Sbjct:    5 LPSAAFT---APLPLTPRCIPPARCPTRRPQSRPSPRA-ELDSVPNSPSLLLRSWADSRTVSSTVDLSRRFISVLFLSNYCQRAAYAEKRLTQLAEHYSVSRRLLILSAGVYSNPGDLLPMKLVTAAKRQGIDMSDERPCAAFEVSD 147
The following BLAST results are available for this feature:
BLAST of Gchil7422.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3JBE7_9FLOR5.220e-11671.14LMWPc domain-containing protein n=1 Tax=Gracilario... [more]
R7QDQ0_CHOCR9.840e-4455.78Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.2300coord: 79..249
e-value: 3.5E-12
score: 48.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..50
IPR036196Phosphotyrosine protein phosphatase I superfamilySUPERFAMILY52788Phosphotyrosine protein phosphatases Icoord: 89..203

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000007_piloncontigtig00000007_pilon:1130564..1131444 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7422.t1Gchil7422.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000007_pilon 1130564..1131444 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7422.t1 ID=Gchil7422.t1|Name=Gchil7422.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=253bp
MSKPHPESSSENDVPEAAFAHAHAPLPLTSKPTISPLSPRRFRPQPRACA
SNGFPSSPGGLVRAWAQSRSISSTLDLTRNFVSILLLSNRCRRAAFAEKQ
LLKTAERYSVSRRLLVLSAGLYSDPGEVLPWKLIKAAGERDIDLSDERPC
AAFNLTDLDYHDYIVVVDRSVRDKLLLMAETHAHKSGGHLYEWERKIRLL
CDFENALPRQQRSAGTPLDVPSFNAGSHMDTCMDIIQGGCETIIRSLITA
GL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036196Ptyr_pPase_sf