Gchil7428.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7428.t1
Unique NameGchil7428.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length247
Homology
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BLAST of Gchil7428.t1 vs. uniprot
Match: A0A2V3J624_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J624_9FLOR)

HSP 1 Score: 276 bits (707), Expect = 2.420e-89
Identity = 135/220 (61.36%), Postives = 175/220 (79.55%), Query Frame = 0 
Query:    1 MDEHSDQEDIDVFVSPKRFGGHTPAAKAIKQKVFEDNLKRAAQETQARKDKQFSMASAQSTLGFYGEDPNKAVHRNVGRNNRLSNVALIANYLAIVLALPVVCIGVWVALKQKNGGIVAYTAKAGHIAKSPLLLGMLIIFGGGFLLMFAFFFGVKHLSPSINEGLGPEKKKSFLAYQILALACMALLAIVLLSTVDPLRHVKTFGVTKTRWIEMSLLYPG 220
            M+ ++DQ+D++V+VSPK FGGHTP AKA +QKVFE+NLKRAAQE +A+K+ Q  M  +    G    D NK VHR VGRNN+LS V LI NYLA   + PV+ +G+WVALK++NGG+ AY A+AG + KSPL+LG L++FG GFLL+F++FFGVK LSP+IN+G+ PEKKK+FL YQ++A+  M LL +VLLSTVDPLRH KT+GVTKT WIEMS+ +PG
Sbjct:    1 MEGNNDQDDVNVYVSPKHFGGHTPGAKATRQKVFEENLKRAAQEREAQKENQMRMGMSTHAQGLDDMDGNKNVHRAVGRNNKLSIVTLIINYLAAFFSFPVLSMGIWVALKERNGGVSAYVARAGQLIKSPLVLGFLLMFGAGFLLIFSYFFGVKELSPAINQGMSPEKKKAFLVYQLMAIVSMVLLTLVLLSTVDPLRHAKTYGVTKTNWIEMSVSHPG 220
The following BLAST results are available for this feature:
BLAST of Gchil7428.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J624_9FLOR2.420e-8961.36Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 196..246
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 111..130
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 155..173
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 89..110
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..88
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 131..154
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 174..195
NoneNo IPR availableTMHMMTMhelixcoord: 88..110
NoneNo IPR availableTMHMMTMhelixcoord: 173..195
NoneNo IPR availableTMHMMTMhelixcoord: 131..153

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000007_piloncontigtig00000007_pilon:1139399..1140327 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7428.t1Gchil7428.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000007_pilon 1139399..1140327 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7428.t1 ID=Gchil7428.t1|Name=Gchil7428.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=247bp
MDEHSDQEDIDVFVSPKRFGGHTPAAKAIKQKVFEDNLKRAAQETQARKD
KQFSMASAQSTLGFYGEDPNKAVHRNVGRNNRLSNVALIANYLAIVLALP
VVCIGVWVALKQKNGGIVAYTAKAGHIAKSPLLLGMLIIFGGGFLLMFAF
FFGVKHLSPSINEGLGPEKKKSFLAYQILALACMALLAIVLLSTVDPLRH
VKTFGVTKTRWIEMSLLYPGKHERTALAQGISAVTHAVLGSLKLLD*
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