Gchil9136.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil9136.t1
Unique NameGchil9136.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length188
Homology
BLAST of Gchil9136.t1 vs. uniprot
Match: A0A8J2SLD7_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SLD7_9STRA)

HSP 1 Score: 135 bits (340), Expect = 3.940e-35
Identity = 88/184 (47.83%), Postives = 110/184 (59.78%), Query Frame = 0
Query:    1 MLNVLVGHRKHQGVAAQASTLDY-VPERELHARDGV-LVALDGVSDPHNVGAVLRSAHFLGAEGVVVSARNCARLGAATSKASAGAAETVTAFATPSLPRLLRRLREQGWRVVGLAA-DGTRPLRDVERVSRTVLVVGGEGDGLRALVRRECDVLAAIDGG-GRGAVDSLNLSVAAAIALHHLL 180
            +LN  V  R HQG    AS LD+ V E       G   +ALD + DP N+G++ R+A FLGA  V+VSA+N A L AA SKASAGA E    +A P+LPR L   + QGWRV+G    D + P+  ++    +VLVVG EG+GLR  VRR CD L  +        VDSLN+ VA AI LHHLL
Sbjct:  168 LLNEAVNDRPHQGCILCASKLDFAVLEEWTPPVQGTGWLALDEIVDPQNLGSLCRTARFLGAS-VLVSAKNSAPLSAAASKASAGALEEAPVYAVPNLPRALEDAKAQGWRVLGAGVGDNSVPVSGLDPTQPSVLVVGSEGEGLRTTVRRACDALVQVGSAPDNSGVDSLNVGVAGAILLHHLL 350          
BLAST of Gchil9136.t1 vs. uniprot
Match: L0A2B7_DEIPD (rRNA methylase, putative, group 3 n=1 Tax=Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416 / KR-200) TaxID=937777 RepID=L0A2B7_DEIPD)

HSP 1 Score: 130 bits (328), Expect = 1.700e-34
Identity = 82/185 (44.32%), Postives = 107/185 (57.84%), Query Frame = 0
Query:    2 LNVLVGHRKHQGVAAQ------ASTLDYVPERELHARDGVLVALDGVSDPHNVGAVLRSAHFLGAEGVVVSARNCARLGAATSKASAGAAETVTAFATPSLPRLLRRLREQGWRVVGLAADGTRPLRDVERVSRTVLVVGGEGDGLRALVRRECDVLAAIDGGGRGAVDSLNLSVAAAIALHHLL 180
            L+ L G  +HQGV A+      AS  D +   E      +LV LDGV+DP N GA++RSA  LGA GVVV  R  A L A  +KA+AGA   +      +LPR +  L+E G  + G A +  R LR ++   R  LV+G EG+GLR LVR +CD L +I    RG V SLN SVAA+I ++H L
Sbjct:   50 LDQLAGTTQHQGVIAEVEDLAWASVDDMLDRAEARGETLLLVLLDGVTDPRNFGAIIRSAEVLGAHGVVVEERRSAPLSATVAKAAAGATSFLPVAQVKNLPRFIDALKEDGVWIYGAAGEAARDLRQLDYDRRLALVIGAEGEGLRRLVREKCDELVSIP--VRGQVQSLNASVAASILIYHAL 232          
BLAST of Gchil9136.t1 vs. uniprot
Match: L0E0U5_THIND (23S rRNA (guanosine-2'-O-)-methyltransferase RlmB n=1 Tax=Thioalkalivibrio nitratireducens (strain DSM 14787 / UNIQEM 213 / ALEN2) TaxID=1255043 RepID=L0E0U5_THIND)

HSP 1 Score: 131 bits (329), Expect = 1.720e-34
Identity = 87/174 (50.00%), Postives = 107/174 (61.49%), Query Frame = 0
Query:    7 GHRKHQGVAAQASTLDYVPERELHARDG----VLVALDGVSDPHNVGAVLRSAHFLGAEGVVVSARNCARLGAATSKASAGAAETVTAFATPSLPRLLRRLREQGWRVVGLAADGTRPLRDVERVSRTVLVVGGEGDGLRALVRRECDVLAAIDGGGRGAVDSLNLSVAAAIAL 176
            G  +HQGV A     D   E +L  R      +L+ALDGV+DPHN+GA LRSA   GA  V+V     A+L  A +KA++GAAETV   A  +L R LR+LR+QG+ VVGLA D    L D++    TVLV+G EG+GLR L R  CD LAAI     G V SLN+SVA  IAL
Sbjct:   65 GGLRHQGVLAWVKPRDRATEVDLADRVAAGATLLLALDGVTDPHNLGACLRSADAAGAAAVIVPRDRSAQLTPAAAKAASGAAETVPVVAVANLARTLRQLRDQGFWVVGLAGDTGGTLYDLDLTVPTVLVLGAEGEGLRRLTREHCDHLAAIP--MLGTVGSLNVSVATGIAL 236          
BLAST of Gchil9136.t1 vs. uniprot
Match: A0A0D6QQB8_9DELT (Putative TrmH family tRNA/rRNA methyltransferase YacO n=4 Tax=Anaeromyxobacter TaxID=161492 RepID=A0A0D6QQB8_9DELT)

HSP 1 Score: 130 bits (328), Expect = 2.610e-34
Identity = 82/182 (45.05%), Postives = 108/182 (59.34%), Query Frame = 0
Query:    2 LNVLVGHRKHQGVAAQASTLDYVPERELHAR------DGVLVALDGVSDPHNVGAVLRSAHFLGAEGVVVSARNCARLGAATSKASAGAAETVTAFATPSLPRLLRRLREQGWRVVGLAADGTRPLRDVERVSRTVLVVGGEGDGLRALVRRECDVLAAIDGGGRGAVDSLNLSVAAAIALH 177
            L+ L G  +HQG+ A  +   Y    EL AR        +LV LDGV DPHN+GA++RSAH LGA GVV+       +  A +KASAGA E        ++ + L RL+E G   V  AADG RPL +V+    T LV+G EG+GLR LVRR CD+ A I   G   +DSL++S +AA+AL+
Sbjct:   58 LDRLAGTDRHQGIVAVVADFRYAELEELLARAQAGGRPPLLVVLDGVEDPHNLGAIIRSAHALGAHGVVIPRDRAVGVTPAVAKASAGAVERCPVARVTNVAKTLERLKEAGIWSVAFAADGERPLGEVDLKGPTALVLGSEGEGLRPLVRRTCDLSARIPMSGD--LDSLSVSASAAVALY 237          
BLAST of Gchil9136.t1 vs. uniprot
Match: A0A525KZU3_9CAUL (23S rRNA (Guanosine(2251)-2'-O)-methyltransferase RlmB n=1 Tax=Phenylobacterium sp. TaxID=1871053 RepID=A0A525KZU3_9CAUL)

HSP 1 Score: 130 bits (326), Expect = 6.960e-34
Identity = 82/168 (48.81%), Postives = 103/168 (61.31%), Query Frame = 0
Query:   11 HQGVAAQASTLDYVPERELHARDG-VLVALDGVSDPHNVGAVLRSAHFLGAEGVVVSARNCARLGAATSKASAGAAETVTAFATPSLPRLLRRLREQGWRVVGLAADGTRPLRDVERVSRTVLVVGGEGDGLRALVRRECDVLAAIDGGGRGAVDSLNLSVAAAIALH 177
            HQGVA +A  L+ V   E  AR G VL+ LD V+DP NVGA+LRSA   GA GVV+  R+  R+  A +KA+AGA E +      +L R L  L + GWR VGL+    RPL +V     TVLV+G EG+GLR LV   CD LA I     G  +SLN+S AAA+AL+
Sbjct:   97 HQGVALRAGELETVGLDEFEARPGAVLLLLDQVTDPQNVGAILRSAAAFGAAGVVLQERHAPRITGALAKAAAGALERIPMARVTNLSRALEELADAGWRPVGLSGAAERPLAEVLDARPTVLVLGSEGEGLRRLVSEHCDELAKIP--MPGGFESLNVSAAAAVALY 262          
BLAST of Gchil9136.t1 vs. uniprot
Match: A0A096PB56_OSTTA (RNA methyltransferase TrmH family n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A096PB56_OSTTA)

HSP 1 Score: 132 bits (331), Expect = 7.690e-34
Identity = 88/191 (46.07%), Postives = 109/191 (57.07%), Query Frame = 0
Query:    2 LNVLVGHRKHQGVAAQASTLDYVPERELHARDGV-----LVALDGVSDPHNVGAVLRSAHFLGAEGVVVSARNCARLGAATSKASAGAAETVTAFATPSLPRLLRRLREQGWRVVGLAADG-TRPLRDVERVSRTVLVVGGEGDGLRALVRRECDVLAAIDGG--GRGAVDSLNLSVAAAIALHHLLPTPT 184
            LN+   ++ HQGV   A  L+     EL   +GV      +ALD V DP N+GA+LRSAHFLG +G+VV  +N A   A  SKASAGA E      T  + R L R R+ GW VVG AAD     +   E  + TVLVVG EG G+R  VRR C+ L +I  G      VDSLN+SVAA I +H LL + T
Sbjct:  160 LNMACDNKPHQGVLLDAEALEIPTVEELPRWNGVGSPPVWLALDEVVDPQNLGAMLRSAHFLGVDGIVVCTKNSAPFNATVSKASAGAMEAQVVHRTGVMHRFLARARDDGWDVVGAAADPRAENIHAFEVAAPTVLVVGNEGVGIRTNVRRACNRLVSIPRGVSATDGVDSLNVSVAAGILIHALLASRT 350          
BLAST of Gchil9136.t1 vs. uniprot
Match: A0A2R6W7G0_MARPO (SpoU_sub_bind domain-containing protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6W7G0_MARPO)

HSP 1 Score: 135 bits (339), Expect = 1.540e-33
Identity = 85/192 (44.27%), Postives = 116/192 (60.42%), Query Frame = 0
Query:    2 LNVLVGHRKHQGVAAQASTLDYVPERELHA------RDGVLVALDGVSDPHNVGAVLRSAHFLGAEGVVVSARNCARLGAATSKASAGAAETVTAFATPSLPRLLRRLREQGWRVVGLAADGTR-PLRDVERVSRTVLVVGGEGDGLRALVRRECDVLAAIDGGGRGAVDSLNLSVAAAIALHHLLPTPTDE 186
            LN+LV +R HQG+   AS L+ VP   L A      R  V VALD ++DP N GAVLRSA+FLGA+GVVV A+N A L    SKASAGA E +      S+ + L + RE+GWRV+G A++ +  P+RD+ R   T+LV+G EG G+R +V+R CD L +I+G        LN   +    ++  +P   DE
Sbjct:  382 LNMLVDNRPHQGLVLDASPLELVPIDTLDAPTYDGDRAPVWVALDEITDPQNFGAVLRSAYFLGADGVVVCAKNSAPLSGVVSKASAGALEVMDVQYCRSMVKFLDKSREKGWRVLGGASEASSVPVRDLPRGIATILVLGNEGRGMRTMVKRSCDELVSIEG-------KLNSRRSKGEYVYEAIPDDEDE 566          
BLAST of Gchil9136.t1 vs. uniprot
Match: A0A388JU39_CHABU (SpoU_sub_bind domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388JU39_CHABU)

HSP 1 Score: 135 bits (339), Expect = 2.600e-33
Identity = 92/202 (45.54%), Postives = 117/202 (57.92%), Query Frame = 0
Query:    2 LNVLVGHRKHQGVAAQASTLDYVPEREL----------HARDGVLVA-----LDGVSDPHNVGAVLRSAHFLGAEGVVVSARNCARLGAATSKASAGAAETVTAFATPSLPRLLRRLREQGWRVVGLAADGTR-PLRDVERVSRTVLVVGGEGDGLRALVRRECDVLAAIDG------GGRG-AVDSLNLSVAAAIALHHLL 180
            LN+L  +R HQG+   AS L +V  +E+          H  DG +VA     LD V DP N GAVLRSA+FLGA GVV  ARN A L A  SKAS+GA E +  ++  ++ + L + R  GWRV+G ++  T    RD+ R   T+ VVG EG GLR  V+REC  +  I G      GGR   +DSLN+SVAA I LH LL
Sbjct:  620 LNLLCDNRPHQGLVLDASPLQFVDVKEIPPPEEDKDWQHLPDGRVVAPCWVALDEVMDPQNFGAVLRSAYFLGATGVVTCARNSAPLSAVVSKASSGAMEAMQVYSCKNMFKFLSQCRANGWRVLGASSSPTAVACRDLARGVPTIFVVGNEGVGLRENVQRECTEMVRIPGSARTDLGGRPFVIDSLNVSVAAGILLHELL 821          
BLAST of Gchil9136.t1 vs. uniprot
Match: A0A318SQY8_9DEIO (23S rRNA (Guanosine2251-2'-O)-methyltransferase n=1 Tax=Deinococcus yavapaiensis KR-236 TaxID=694435 RepID=A0A318SQY8_9DEIO)

HSP 1 Score: 127 bits (319), Expect = 3.490e-33
Identity = 76/183 (41.53%), Postives = 108/183 (59.02%), Query Frame = 0
Query:    2 LNVLVGHRKHQGVAAQASTLDY------VPERELHARDGVLVALDGVSDPHNVGAVLRSAHFLGAEGVVVSARNCARLGAATSKASAGAAETVTAFATPSLPRLLRRLREQGWRVVGLAADGTRPLRDVERVSRTVLVVGGEGDGLRALVRRECDVLAAIDGGGRGAVDSLNLSVAAAIALHH 178
            L+ LVG  +HQGV A+   LD+      +   E    D +++ LDG++DP N GA++RSA  LGA GVVV  R    L A  +K +AGA   +      +LPR + +L+E G  V G A +  + LR ++   +  LV+G EG+GLR LVR +CD LA+I    +G V SLN SVAA+I ++H
Sbjct:   50 LDQLVGTTQHQGVVAEVEDLDWSNVDDILDRAEAKGEDLLVILLDGITDPRNFGAIIRSAEVLGAHGVVVEERRSPPLSAVVAKTAAGATSFLPVARVKNLPRFIDQLKEDGVWVYGAAGESAKDLRKLDFKRKLALVIGAEGEGLRRLVRDKCDELASIP--MKGEVQSLNASVAASILIYH 230          
BLAST of Gchil9136.t1 vs. uniprot
Match: A0A7W8KFQ4_9DEIO (23S rRNA (Guanosine2251-2'-O)-methyltransferase n=1 Tax=Deinococcus metalli TaxID=1141878 RepID=A0A7W8KFQ4_9DEIO)

HSP 1 Score: 127 bits (318), Expect = 4.930e-33
Identity = 81/184 (44.02%), Postives = 106/184 (57.61%), Query Frame = 0
Query:    2 LNVLVGHRKHQGVAAQ------ASTLDYVPERELHARDGVLVALDGVSDPHNVGAVLRSAHFLGAEGVVVSARNCARLGAATSKASAGAAETVTAFATPSLPRLLRRLREQGWRVVGLAADGTRPLRDVERVSRTVLVVGGEGDGLRALVRRECDVLAAIDGGGRGAVDSLNLSVAAAIALHHL 179
            L+ L G   HQGV A+      AS  D +   E  A   V+V LDGV+DP N GA++RSA  LGA GVVV  R  A L    +K +AGA   +    T +LPRL+ +L+  G  V G A +  +P+  V+   +  LV+G EG+GLR LVR +CDVL +I    RG V SLN SVAA I L+ +
Sbjct:   50 LDQLAGTTAHQGVMAEVEELAWASVDDILDRAEQRAEPLVVVLLDGVTDPRNFGAIIRSAEVLGAHGVVVEERRSAPLSPVVAKTAAGATSFLPVAQTKNLPRLIDQLKADGVWVYGAAGEAAQPVGRVDFSGKVALVIGAEGEGLRRLVREKCDVLVSIP--TRGRVQSLNASVAAGILLYEV 231          
The following BLAST results are available for this feature:
BLAST of Gchil9136.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8J2SLD7_9STRA3.940e-3547.83Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
L0A2B7_DEIPD1.700e-3444.32rRNA methylase, putative, group 3 n=1 Tax=Deinococ... [more]
L0E0U5_THIND1.720e-3450.0023S rRNA (guanosine-2'-O-)-methyltransferase RlmB ... [more]
A0A0D6QQB8_9DELT2.610e-3445.05Putative TrmH family tRNA/rRNA methyltransferase Y... [more]
A0A525KZU3_9CAUL6.960e-3448.8123S rRNA (Guanosine(2251)-2'-O)-methyltransferase ... [more]
A0A096PB56_OSTTA7.690e-3446.07RNA methyltransferase TrmH family n=2 Tax=Ostreoco... [more]
A0A2R6W7G0_MARPO1.540e-3344.27SpoU_sub_bind domain-containing protein n=2 Tax=Ma... [more]
A0A388JU39_CHABU2.600e-3345.54SpoU_sub_bind domain-containing protein n=1 Tax=Ch... [more]
A0A318SQY8_9DEIO3.490e-3341.5323S rRNA (Guanosine2251-2'-O)-methyltransferase n=... [more]
A0A7W8KFQ4_9DEIO4.930e-3344.0223S rRNA (Guanosine2251-2'-O)-methyltransferase n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001537tRNA/rRNA methyltransferase, SpoU typePFAMPF00588SpoU_methylasecoord: 35..177
e-value: 4.9E-30
score: 104.6
IPR029026tRNA (guanine-N1-)-methyltransferase, N-terminalGENE3D3.40.1280.10coord: 18..185
e-value: 1.3E-42
score: 147.2
NoneNo IPR availablePIRSRPIRSR029256-1PIRSR029256-1coord: 45..177
e-value: 0.0015
score: 16.1
NoneNo IPR availablePANTHERPTHR46103RRNA METHYLTRANSFERASE 1, MITOCHONDRIALcoord: 2..180
NoneNo IPR availableCDDcd18105SpoU-like_MRM1coord: 35..179
e-value: 8.54332E-53
score: 164.229
IPR029028Alpha/beta knot methyltransferasesSUPERFAMILY75217alpha/beta knotcoord: 12..180

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004370_piloncontigtig00004370_pilon:1981559..1982122 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil9136.t1Gchil9136.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004370_pilon 1981559..1982122 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil9136.t1 ID=Gchil9136.t1|Name=Gchil9136.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=188bp
MLNVLVGHRKHQGVAAQASTLDYVPERELHARDGVLVALDGVSDPHNVGA
VLRSAHFLGAEGVVVSARNCARLGAATSKASAGAAETVTAFATPSLPRLL
RRLREQGWRVVGLAADGTRPLRDVERVSRTVLVVGGEGDGLRALVRRECD
VLAAIDGGGRGAVDSLNLSVAAAIALHHLLPTPTDEC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001537SpoU_MeTrfase
IPR029026tRNA_m1G_MTases_N
IPR029028Alpha/beta_knot_MTases