Gchil7444.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7444.t1
Unique NameGchil7444.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length337
Homology
BLAST of Gchil7444.t1 vs. uniprot
Match: A0A2V3J386_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J386_9FLOR)

HSP 1 Score: 496 bits (1276), Expect = 1.530e-174
Identity = 250/335 (74.63%), Postives = 279/335 (83.28%), Query Frame = 0
Query:    1 MTSRSPNPPFWRTRKALLRLPILTQLSMAAVAGALGLLLIQNIAAALVTNTARTSSPGFDSGIRPRVRLPPRPSPLVIAAAGLPRTGSTWVYNVLRILARIRDPNSVAGWYADLINIWKNHKTRRYEHMKESWLTAYRSLNTSLVIKMHGPGPFKLFSHGSPLEKGADLTVITHRDLRTEVRSWVYQNWNSSIHSGDINSTPFKDPNQWVRVAHHILDERKSTLKSIGSGRFLDIRYEEWNNQPLEKQVAVIKQIADELDWDYTSAELMATAIEAARLEPPANDAVLMYNPVNKLHPGHTRVDATNPDFIKALKSGFRAIEQDTDSSLFLNLKHY 335
            MT+RS  P FWRTRK+L RLPI T L+ AAVAGAL +L+ QN  + L++  A         G+    RLPPRP PLVI AAGLPRTGSTWVYNV+RILARIRDPNSVAGWYADLINIWKNHKT RY+HMKESWLTAY+SLNT+LVIKMHGPGPFKLFSHG+PL K A+LTVITHRDLRTEVRSWVYQNWN+SIH+G+I STPF DPNQWVRVAHHILDER STL S+GSGR LDIRYE+WN +  E QV VIK+IA+EL W Y+  ELMATAIEAARLEPPAN+AVLMYNPVNKLHPGHTRVDA +P F+ AL+ GFRAIE+D DS  FL  K Y
Sbjct:    1 MTARSSQPLFWRTRKSLTRLPIATLLTFAAVAGALTMLMAQNFFSILLSKKAPVK------GVA--TRLPPRPRPLVIVAAGLPRTGSTWVYNVIRILARIRDPNSVAGWYADLINIWKNHKTGRYDHMKESWLTAYKSLNTTLVIKMHGPGPFKLFSHGAPL-KQANLTVITHRDLRTEVRSWVYQNWNASIHAGNIGSTPFGDPNQWVRVAHHILDERLSTLASVGSGRVLDIRYEDWNQKSFEHQVKVIKKIANELGWPYSREELMATAIEAARLEPPANNAVLMYNPVNKLHPGHTRVDAKDPTFVHALEKGFRAIEKDADSRSFLKSKRY 326          
BLAST of Gchil7444.t1 vs. uniprot
Match: R7QIR2_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QIR2_CHOCR)

HSP 1 Score: 129 bits (325), Expect = 1.300e-30
Identity = 93/291 (31.96%), Postives = 133/291 (45.70%), Query Frame = 0
Query:   70 PPRPSPLVIAAAGLPRTGSTWVYNVLRILARIRDPNSVAGWYADLINIWKNHKTRRYEHMKESWLTAYRSLNTSLVIKMHGPGPFKLFSH----GSPLEKGADLTVITHRDLRTEVRSWVYQNWNSSIHSGDINSTPF------------------KDPNQWVRVAHHILDERKSTLKSIGSGRFLDIRYEEWNNQPLEKQVAVIKQIADELDWDYTSAELMATAIEAARLEPP---ANDAVLMYNPVNKLHPGHTRVDATNPDFIKALKSGFRAIEQDTDSSLFLNLKHY 335
            P  P PLV+ AAG  R GSTW++N LRIL R+RDPN+VAGW+ADL      +  R      E    A++ + TSL++K+H    +  F       + +E+  D    ++RD+R  VRS     W   +  G +    F                   D + WVR A   +  R+  L + G    +DI+ E+         VAV++ +   LD+ Y+  EL   A E  RL  P   A    +  NPV  LH GH +VD + P      + G  AI  D D +L+L    Y
Sbjct:  130 PEAPPPLVVIAAGGSRAGSTWLFNALRILLRVRDPNTVAGWHADLSAWHDRYAVRPPNATGEPTARAFQRMGTSLLVKVHLLQDWHHFQATEDADAKMEQHVDAVFTSYRDVRHVVRSVRDMGWGVDVPLGRLTHPDFCRKRAPQQRHKTLTAGQYHDKSVWVRQALATIRCREVLLAAAGGKLKMDIKAEDMRGLSEAATVAVLRDMGTHLDYAYSEGELEGAARELMRLRAPLCNAGAVAMDLNPVTHLHRGHVQVDKS-PAAGLVERRGMGAITADADCALWLTRHGY 419          
BLAST of Gchil7444.t1 vs. uniprot
Match: A0A7S2ZYK3_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZYK3_9RHOD)

HSP 1 Score: 96.7 bits (239), Expect = 4.560e-19
Identity = 87/294 (29.59%), Postives = 132/294 (44.90%), Query Frame = 0
Query:   74 SPLVIAAAGLPRTGSTWVYNVLRILARIRDPNSVAGWYADLINIWKNHKTRRYEHMKESWLTAYRSLNTSLVIKMH-GPGPFKLFS--HGSPLEKGADLTVITHRDLRTEVRSWVYQNWNSSIHS----------GDINSTPF------KDPNQWV---RVAHHILDERKSTLKSIG---------SGRFLDIRYEEWNNQPLEKQVAVIKQIADELDWDYTSAELMATAIEAARLEPPANDAVLMYNPVNKLHPGHTRVDATNPDFIKALKSGFRAIEQDTDSSLFLNLKHYT 336
            +PLV+   GLPRTGST VYN++R      +PN+++G+  DL++  +   T        S   A RS+   LV+K+H  P  ++LF     +P E G D  + T RDLR +V S +   W+S ++           G++ ST        +DP  WV   R     LD+ K      G           +F D +   W  Q LE      ++   EL       E++AT ++   ++P    + +  NP   +H GH R      D+ +A   G  AIE D D S +L+   YT
Sbjct:   66 TPLVLVM-GLPRTGSTIVYNMIRKALEADNPNTLSGYVGDLVSTARAFSTDD----SASAALALRSMGVPLVVKLHLMPHIYQLFGPVQQAPAELGIDKIICTCRDLRMQVLSNIRMGWSSMVYEENLLQEDFCLGELKSTQLLSPSDLEDPRTWVLQARAQIRCLDKIKDWAGRDGIQWIRTEDIPRKFADPQGRAWLKQELEPLPGTRQRSESEL-------EVLATFLDG--IKPLQCSSTVAVNPSTHMHRGHIRKSEALKDYERA---GIEAIEADPDCSAWLSEHGYT 342          
BLAST of Gchil7444.t1 vs. uniprot
Match: A0A1X6NVY7_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NVY7_PORUM)

HSP 1 Score: 86.3 bits (212), Expect = 3.980e-15
Identity = 54/155 (34.84%), Postives = 78/155 (50.32%), Query Frame = 0
Query:   75 PLVIAAAGLPRTGSTWVYNVLRILARIRDPNSVAGWYADLINIWKNHKTRR-----YEHMK-ESWLTAYRSLNTSLVIKMHGPGPFKLFSHGSP--------------------LEKGADLTVITHRDLRTEVRSWVYQNWNSSIHSGDINSTPF 203
            PL++ AAG  R+ STWVYNV RIL R+RDPN+VAGWY DL  +   +         Y H++  S L A RSL+TS+++K+H    +     G+                     L   AD+ + +HRD+R  VRS  +  W S ++    +   F
Sbjct:   85 PLLVVAAGGSRSASTWVYNVARILLRVRDPNTVAGWYEDLAGLTGAYAQLEAGNGTYPHVEVASRLDALRSLDTSVLLKIHLVQEWATLLGGADAATTTATGGASDADLVPLTELSAAADVVLTSHRDVREVVRSLRHMGWGSRVNPAAFDHPDF 239          
BLAST of Gchil7444.t1 vs. uniprot
Match: A0A7S4M8Q7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4M8Q7_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 5.590e-7
Identity = 24/42 (57.14%), Postives = 33/42 (78.57%), Query Frame = 0
Query:   73 PSPLVIAAAGLPRTGSTWVYNVLRILARIRDPNSVAGWYADL 114
            P PL++  AG  RTG+T++YN++RIL R RDPN ++GWY DL
Sbjct:   66 PKPLIVFVAGGGRTGTTYMYNLVRILLRQRDPNLISGWYEDL 107          
The following BLAST results are available for this feature:
BLAST of Gchil7444.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3J386_9FLOR1.530e-17474.63Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QIR2_CHOCR1.300e-3031.96Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S2ZYK3_9RHOD4.560e-1929.59Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A1X6NVY7_PORUM3.980e-1534.84Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S4M8Q7_9STRA5.590e-757.14Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 59..302
e-value: 1.0E-10
score: 43.4
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 69..275
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 29..40
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 46..336
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 41..45
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..45
NoneNo IPR availableTMHMMTMhelixcoord: 21..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000007_piloncontigtig00000007_pilon:1239928..1240938 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7444.t1Gchil7444.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000007_pilon 1239928..1240938 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7444.t1 ID=Gchil7444.t1|Name=Gchil7444.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=337bp
MTSRSPNPPFWRTRKALLRLPILTQLSMAAVAGALGLLLIQNIAAALVTN
TARTSSPGFDSGIRPRVRLPPRPSPLVIAAAGLPRTGSTWVYNVLRILAR
IRDPNSVAGWYADLINIWKNHKTRRYEHMKESWLTAYRSLNTSLVIKMHG
PGPFKLFSHGSPLEKGADLTVITHRDLRTEVRSWVYQNWNSSIHSGDINS
TPFKDPNQWVRVAHHILDERKSTLKSIGSGRFLDIRYEEWNNQPLEKQVA
VIKQIADELDWDYTSAELMATAIEAARLEPPANDAVLMYNPVNKLHPGHT
RVDATNPDFIKALKSGFRAIEQDTDSSLFLNLKHYT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase