Gchil7388.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7388.t1
Unique NameGchil7388.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length200
Homology
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BLAST of Gchil7388.t1 vs. uniprot
Match: A0A1X6P628_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P628_PORUM)

HSP 1 Score: 69.7 bits (169), Expect = 3.370e-11
Identity = 54/144 (37.50%), Postives = 72/144 (50.00%), Query Frame = 0 
Query:   61 RDAHADRTGRYSTKLTAKRRYVARITRGMQHIL--------TADKDDDKSDDEPRAPDAALIDDTLVAMQLFGTTYFSEGNRIGERERELKRAVSDARAALDAILRARRRADDAAEGVAVRALRAAVREWLRVADFERIAGVPI 196
            R A ADRTG+YSTKLTA RRY  RIT  +  +         T+  +D    D  R       D  L A +LFG+TYFSEGNR+ ERE+EL   V    AA+  +  A +    +A   A RA       +L VA  + +  + +
Sbjct:   67 RPAAADRTGKYSTKLTAARRYKPRITAAVAALAAVGPVLAPTSSANDGAWRDTVRTY-VEGADGGLSAAKLFGSTYFSEGNRVSEREKELAEEVGAVEAAVGRLGVAAKSGSQSAAWAAWRAAAGGFNNYLTVAKLDEVPRIEL 209
The following BLAST results are available for this feature:
BLAST of Gchil7388.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A1X6P628_PORUM3.370e-1137.50Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 19..40
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 58..65
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..45
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 46..57
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..65
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 66..199

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000007_piloncontigtig00000007_pilon:831679..832278 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7388.t1Gchil7388.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000007_pilon 831679..832278 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7388.t1 ID=Gchil7388.t1|Name=Gchil7388.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=200bp
MRPRAAAFAYGALPPRRRAARARRVAPKSQHHAPLSSRTPTIQRRALLHL
AAALLPLCGARDAHADRTGRYSTKLTAKRRYVARITRGMQHILTADKDDD
KSDDEPRAPDAALIDDTLVAMQLFGTTYFSEGNRIGERERELKRAVSDAR
AALDAILRARRRADDAAEGVAVRALRAAVREWLRVADFERIAGVPISGA*
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