Gchil9092.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil9092.t1
Unique NameGchil9092.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length365
Homology
BLAST of Gchil9092.t1 vs. uniprot
Match: A0A2V3J5C3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5C3_9FLOR)

HSP 1 Score: 331 bits (849), Expect = 1.020e-108
Identity = 171/356 (48.03%), Postives = 227/356 (63.76%), Query Frame = 0
Query:    5 IFAAVLFGLCLFENVSGADYGSCVCKQGGRGSGTGATAAEACTKAMKRCPVKNKCLRGYVCKGGAGKPHCRIARKIVNKRINLKRKTVWKMKHGKRVRRFVVRKIVQFRCNVVCKSDGYGSCVKPGGRGDPHLVGFDGKKFDFHGVENKFYALFGRYGGDFVVTKIRSAERLAKNGIEKTYFDEVGLQLNGGKDDVSVSLVEDDAESGKWKTKVALNGKVLSADEHFGNSHVLFAGEDGAITVRSSENEYVLREEQIDNKERRHLDIDVTLLGDPNKQHRYVGILGVTLNRAMGREMVEELGYSARDVELETAMRDRFEVESLFPKIEEQDVNLSGVVRIIDVPNQKFIGNKSWRA 360
            I  +++  LCL      A    C CK+GG+  GTG +  +AC  AM +CP  + C RG VCK    +P CRI RK V       +K +WK+  GK+VR F+  K+  FRCN+ C   G+  CVKPGGRGDPHL GFDGK FDFHGV  K+YA FGR  GD +VT+IRSA+R AK G+EKTYFDE GL+ +G  D +SVSLVED  +SG W  ++ LN +++  +   G++ +     DG++TVR++E EYV R + +D   RRHLD+++ L+G P     YVG+LGVTLN A+G+E+  ELG + RD E E  +R RFEV SLFP I +   +LSGVVR + V N       SW+A
Sbjct:    7 IVLSLVLALCLAPQAVSAGGKGCTCKKGGKAVGTGVSPGKACMAAMMKCPTVSSCRRGRVCKE---RPRCRIGRKFVRPFYKKVKKPIWKVIRGKKVRVFIWVKVKFFRCNITCSPKGFSVCVKPGGRGDPHLNGFDGKIFDFHGVHGKYYAFFGRSSGDMLVTRIRSAKRWAKTGVEKTYFDEFGLKTSGSDDRISVSLVEDKGQSGVWNAELKLNDEIVDHEITLGSTQIKRDAVDGSVTVRTAETEYVFRPKYLDIAARRHLDVEIGLVGSPQTSESYVGVLGVTLNHALGKEISAELGTTERDAEFEQVLRGRFEVASLFPDISDNVDSLSGVVRGL-VRNVAVPETTSWKA 358          
BLAST of Gchil9092.t1 vs. uniprot
Match: A0A2V3ILE0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILE0_9FLOR)

HSP 1 Score: 290 bits (742), Expect = 1.510e-92
Identity = 154/340 (45.29%), Postives = 211/340 (62.06%), Query Frame = 0
Query:   22 ADYGSCVCKQGGRGSGTGATAAEACTKAMKRCPVKNKCLRGYVCKGGAGKPHCRIARKIVNKRINLKRKTVWKMKHGKRVRRFVVRKIVQFRCNVVCKSDGYGSCVKPGGRGDPHLVGFDGKKFDFHGVENKFYALFGRYGGDFVVTKIRSAERLAKNGIEKTYFDEVGLQLNGGKDDVSVSLVEDDAESGKWKTKVALNGKVLSADEHFGNSHVLFAGEDGAITVRSSENEYVLREEQIDNKERRHLDIDVTLLGDPNKQHRYVGILGVTLNRAMGREMVEELGYSARDVELETAMRDRFEVESLFPKIEEQDVNLSGVVRIID-VPNQKFIGNKSWRA 360
            A YGSC C+ G        +   AC KA  +C V   C  G VC+    KP C    K + K      K V K + GK++++ + R  V+ +C+VVC      +CV PGGRGDPHL GFDG  FDFHGV  +FY+LFGR GGD +VTKIRSA++ AKNGIEKTYFD+ GL++    D +SVSL  DD     W   + LNG  +  D +   +H+L    D + TV + E ++V R  + ++K+RRHLDI+VTL+G+P+  H+Y+G+LG TLNRA+GRE + E   + RDV +ETAMR+RFEV+SLF + +  +  L+G+VR +  V  +K     SWRA
Sbjct:   24 AGYGSCSCRTGSVARAKAHSRKAACDKARSKCVVYRACNHGAVCRM---KPQCASTSKKITKIRERVSKLVIKSRRGKKIKKLITRTAVRHKCSVVCWGKTTETCVVPGGRGDPHLTGFDGHTFDFHGVHGRFYSLFGRLGGDVLVTKIRSAKQWAKNGIEKTYFDQFGLRVLNSNDLISVSLKLDDGHGDSWHPVLELNGDEVQHDVYLDQAHILTDTHDHSFTVTTRETQFVFRAARFEDKKRRHLDIEVTLVGEPHPTHQYLGLLGHTLNRALGRETLPEFAVTERDVSIETAMRERFEVDSLFAQPQHDERVLTGLVRSVSSVSFEKKHSKSSWRA 360          
BLAST of Gchil9092.t1 vs. uniprot
Match: A0A2V3J5F3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5F3_9FLOR)

HSP 1 Score: 273 bits (699), Expect = 5.110e-86
Identity = 162/357 (45.38%), Postives = 221/357 (61.90%), Query Frame = 0
Query:    9 VLFGLCLFE---NVSGADYGSCVCKQGGRGSGTGATAAEACTKAMKRCPVKNKCLRGYVCKGGAGKPHCRIARKIVNKRINLKRKTVWKMKHG-KRVRRFVVRKIVQFRCNVVCKSDGYGSCVKPGGRGDPHLVGFDGKKFDFHGVENKFYALFGRYGGDFVVTKIRSAERLAKNGIEKTYFDEVGLQLNGGKDDVSVSLVEDDAESGKWKTKVALNGKVLSADEHFGNSHVLFAGE-DGAITVRSSENEYVLREEQIDNKERRHLDIDVTLLGDPNKQHRYVGILGVTLNRAMGREMVEELGYSARDVELETAMRDRFEVESLFPKIEEQDVNLSGVVRIIDVPNQKFIGNKSWRA 360
            +LFGL L+     V+G +   C CK  GR +G    + +AC  A+K CP  + C RG VC+G   KP C IA K + + I ++ + V +M  G KR+ R  V  +V FRC++ C +     CVKPGG+GDPHL GFDGK FDFHGV  K+YA FGR GGD ++T+IRSA+  A NGIEKTYFD+ GL+  G  DDVSVSL + +     W+ ++ +NG V+ A+E   +S  +   E  G I+VR+ E EY    ++ D+  RRHLD++V+L G P +   YVG+LGVTLN AMG+E+  E+      V LE A+R+RFEV+SLF  +     +LSGVVR   +  + F   KSW A
Sbjct:   14 LLFGLALYNVPHPVNGGE--GCFCKWYGRSTGIDKDSKQACMIALKNCPTISTCSRGSVCRG---KPKCSIAIKSLRRMIRIETRDVERMVRGRKRIVRVRVP-VVLFRCSIGCTAKRSFVCVKPGGKGDPHLTGFDGKMFDFHGVHGKYYAFFGRAGGDMLITRIRSAKMWAGNGIEKTYFDQFGLKTAGSTDDVSVSLAQKNDNPTVWQGELRVNGNVV-ANEFESDSFSVKRDEIKGLISVRTGECEYKFIAKRTDDAARRHLDVEVSLHGTPQRSGTYVGVLGVTLNHAMGKEVKSEIRTLKNAVALEKALRERFEVDSLFSDVSADVESLSGVVRSAFMNQKAFENGKSWVA 363          
The following BLAST results are available for this feature:
BLAST of Gchil9092.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3J5C3_9FLOR1.020e-10848.03Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ILE0_9FLOR1.510e-9245.29Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J5F3_9FLOR5.110e-8645.38Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 247..267
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..364
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004370_piloncontigtig00004370_pilon:1619582..1620676 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil9092.t1Gchil9092.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004370_pilon 1619582..1620676 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil9092.t1 ID=Gchil9092.t1|Name=Gchil9092.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=365bp
MYTRIFAAVLFGLCLFENVSGADYGSCVCKQGGRGSGTGATAAEACTKAM
KRCPVKNKCLRGYVCKGGAGKPHCRIARKIVNKRINLKRKTVWKMKHGKR
VRRFVVRKIVQFRCNVVCKSDGYGSCVKPGGRGDPHLVGFDGKKFDFHGV
ENKFYALFGRYGGDFVVTKIRSAERLAKNGIEKTYFDEVGLQLNGGKDDV
SVSLVEDDAESGKWKTKVALNGKVLSADEHFGNSHVLFAGEDGAITVRSS
ENEYVLREEQIDNKERRHLDIDVTLLGDPNKQHRYVGILGVTLNRAMGRE
MVEELGYSARDVELETAMRDRFEVESLFPKIEEQDVNLSGVVRIIDVPNQ
KFIGNKSWRASVTT*
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