Gchil8930.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil8930.t1
Unique NameGchil8930.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length190
Homology
BLAST of Gchil8930.t1 vs. uniprot
Match: A0A2V3IK21_9FLOR (CBS domain-containing protein CBSX3, mitochondrial n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IK21_9FLOR)

HSP 1 Score: 296 bits (759), Expect = 2.250e-100
Identity = 159/195 (81.54%), Postives = 171/195 (87.69%), Query Frame = 0
Query:    1 MALLRRSATLFRTLAYQNLRPLTSP------TSTETSSEQSHSERSLGTVRDVLKTKGEKFFYTFGDALVYDAVKEMVKHNIGSLIIVEGFNKKPVGIVTETDYLNKVIVRGRSSKSTLVRDIMSTKEFTFVNPDATLSHCMELMTGRRIRHIPVVEEDTNKVLGMVSIGDIVSELVAAHKRDAEHMRSFISGSY 189
            M+LLRRSA LFRT+  Q  RPL S       T  E+ ++ S S+R LGTVRDVLKTKGEKFFYTFGDALVYDAVKEMVKHNIGSLIIVEG +KKPVGIVTETDYLNKVIVRGRSSKSTLVRDIMSTK+FTFVNPDATL+ CMELMT RRIRHIPVVEE ++KVLGMVSIGDIVSELVAAHKR+ EHMRSFISGSY
Sbjct:    1 MSLLRRSALLFRTITAQQFRPLASTPTAQPATPPESETKSSGSDRGLGTVRDVLKTKGEKFFYTFGDALVYDAVKEMVKHNIGSLIIVEGDDKKPVGIVTETDYLNKVIVRGRSSKSTLVRDIMSTKKFTFVNPDATLTECMELMTVRRIRHIPVVEEGSHKVLGMVSIGDIVSELVAAHKREGEHMRSFISGSY 195          
BLAST of Gchil8930.t1 vs. uniprot
Match: R7QA65_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QA65_CHOCR)

HSP 1 Score: 251 bits (641), Expect = 4.150e-80
Identity = 136/185 (73.51%), Postives = 149/185 (80.54%), Query Frame = 0
Query:   11 FRTLAYQNLRPLTS------PTSTETSSEQSHSERSLGTVRDVLKTKGEKFFYTFGDALVYDAVKEMVKHNIGSLIIVEGFNKKPVGIVTETDYLNKVIVRGRSSKSTLVRDIMSTKEFTFVNPDATLSHCMELMTGRRIRHIPVVEEDTNKVLGMVSIGDIVSELVAAHKRDAEHMRSFISGSY 189
            FR LAY   RP  S      PT+T         E  LGTVRDVLKTKGEKFFYT GD LVYDAVK+MV HNIGSLIIVEG +K+PVGI+TETDYLNKVIVRGRSS+STLVRDIMSTK+FT V P ATL  CMELMT RRIRHIPVV+  ++KVLGMVS+GDIVSELVAAH+R+AEHMRSFISG Y
Sbjct:  179 FRRLAYS--RPYASTPAAAAPTATSDEKVPPSVEHGLGTVRDVLKTKGEKFFYTRGDDLVYDAVKKMVHHNIGSLIIVEGADKRPVGIITETDYLNKVIVRGRSSRSTLVRDIMSTKQFTSVAPSATLHECMELMTERRIRHIPVVDHQSHKVLGMVSVGDIVSELVAAHRRNAEHMRSFISGGY 361          
BLAST of Gchil8930.t1 vs. uniprot
Match: A0A7S1XFL2_9RHOD (Hypothetical protein n=2 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XFL2_9RHOD)

HSP 1 Score: 170 bits (430), Expect = 2.390e-50
Identity = 94/164 (57.32%), Postives = 119/164 (72.56%), Query Frame = 0
Query:   27 STETSSEQSHSERSLGTVRDVLKTKGEKFFYTFGDALVYDAVKEMVKHNIGSLIIVEGFNK-KPVGIVTETDYLNKVIVRGRSSKSTLVRDIMSTKEFTFVNPDATLSHCMELMTGRRIRHIPVVEEDTNKVLGMVSIGDIVSELVAAHKRDAEHMRSFISGSY 189
            STET S  SH E    TV DVL  KGE+ +  F D LV+DAVKEMVKHNIGSL++V+     KP+GIVTE DYL KVIV GR+SK++ ++ IMS K   +V P ATL +CM+LM+  R+RHIPVV  D  ++ G++SIGDIV+ELVA+HKR  E M ++I GSY
Sbjct:   38 STETPS--SHFEARSMTVADVLSLKGERQYTCFEDDLVFDAVKEMVKHNIGSLVVVDRKTPTKPIGIVTERDYLEKVIVLGRTSKTSTIKQIMSQKNLVWVTPTATLHYCMDLMSKNRVRHIPVVNSD--ELQGLISIGDIVTELVASHKRVNEAMHTYIGGSY 197          
BLAST of Gchil8930.t1 vs. uniprot
Match: A0A1X6PEM3_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PEM3_PORUM)

HSP 1 Score: 158 bits (400), Expect = 2.500e-45
Identity = 86/155 (55.48%), Postives = 109/155 (70.32%), Query Frame = 0
Query:   42 GTVR--DVLKTKGEKFFYTFGDALVYDAVKEMVKHNIGSLIIVE-----GFNKKPVGIVTETDYLNKVIVRGRSSKSTLVRDIMSTKEFTFVNPDATLSHCMELMTGRRIRHIPVVEEDTNKVLGMVSIGDIVSELVAAHKRDAEHMRSFISGSY 189
            GTVR  DVL  KGE F+ T  DALVYDA+ EMVKHNIGSL++VE         KPVGI+TE DYL+KV++ GRSS++T V  IMS K+   V  D TL  CM+LM   R+RHIPV+EE+   + G++SIGD+V ELV +HKR+AE M  +I G +
Sbjct:   82 GTVRVADVLALKGEVFYSTTADALVYDAIVEMVKHNIGSLVVVEPAEGGAGGLKPVGILTERDYLDKVVILGRSSRTTKVSAIMSEKKLVAVGGDTTLGDCMDLMVANRVRHIPVLEEN-GLLKGLISIGDVVKELVDSHKRNAESMSDYIRGGW 235          
BLAST of Gchil8930.t1 vs. uniprot
Match: M2W8E0_GALSU (IMP dehydrogenase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2W8E0_GALSU)

HSP 1 Score: 157 bits (396), Expect = 2.180e-44
Identity = 81/152 (53.29%), Postives = 109/152 (71.71%), Query Frame = 0
Query:   43 TVRDVLKTKGEKFFYTFGDALVYDAVKEMVKHNIGSLIIVE----GFNKKPVGIVTETDYLNKVIVRGRSSKSTLVRDIM-STKEFTFVNPDATLSHCMELMTGRRIRHIPVVEEDTNKVLGMVSIGDIVSELVAAHKRDAEHMRSFISGSY 189
            TV D+LK KGEKF+       VYDA+K+MV +N+GSL++++    G   KP+GIVTE DYL K+++ GRSSK+T V+DIM S      V+P A+L+ CMELMT +RIRHIPV++ D N V GMVSIGDIV ELV  H+ +A+ +  +I G+Y
Sbjct:  113 TVGDILKVKGEKFYRIKTTDFVYDAIKKMVDNNVGSLVVIDVDGDGITGKPLGIVTERDYLRKIVLLGRSSKTTYVKDIMTSANNLVSVSPSASLNDCMELMTQKRIRHIPVIDNDGN-VKGMVSIGDIVKELVEEHRHEAKKLNEYIQGTY 263          
BLAST of Gchil8930.t1 vs. uniprot
Match: A9RR66_PHYPA (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9RR66_PHYPA)

HSP 1 Score: 135 bits (341), Expect = 8.900e-37
Identity = 76/153 (49.67%), Postives = 101/153 (66.01%), Query Frame = 0
Query:   43 TVRDVLKTKGEK----FFYTFGDALVYDAVKEMVKHNIGSLIIVE-GFNKKPVGIVTETDYLNKVIVRGRSSKSTLVRDIMSTK-EFTFVNPDATLSHCMELMTGRRIRHIPVVEEDTNKVLGMVSIGDIVSELVAAHKRDAEHMRSFISGSY 189
            T+ D+LK KG++    + +   D  VYDAVK M  HN+G+L++V+ G  KK  GI+TE DYL K+IV+GRSSK+T V DIM+ + +   V PD  +   MELMT  RIRHIPVVEE   K  GMVSIGD+V  +V  H+ + + + SFI G Y
Sbjct:   58 TIADILKEKGQQADGSWLWCSVDDTVYDAVKSMTAHNVGALLVVKSGAEKKLAGIITERDYLRKIIVQGRSSKTTKVGDIMTEENKLITVKPDTKVLRAMELMTDNRIRHIPVVEESGMK--GMVSIGDVVRAVVDEHREELQRLNSFIQGGY 208          
BLAST of Gchil8930.t1 vs. uniprot
Match: B4G1D2_MAIZE (CBS domain protein n=18 Tax=Panicoideae TaxID=147369 RepID=B4G1D2_MAIZE)

HSP 1 Score: 135 bits (339), Expect = 1.640e-36
Identity = 75/153 (49.02%), Postives = 102/153 (66.67%), Query Frame = 0
Query:   43 TVRDVLKTKGEK----FFYTFGDALVYDAVKEMVKHNIGSLIIVE-GFNKKPVGIVTETDYLNKVIVRGRSSKSTLVRDIMSTK-EFTFVNPDATLSHCMELMTGRRIRHIPVVEEDTNKVLGMVSIGDIVSELVAAHKRDAEHMRSFISGSY 189
            TV DVLK+KG+     + +   +  VYDAVK M +HN+G+L++V+ G NK   GIVTE DYL K+IV+GRSSKST V DIM+ + +   VNPD  +   M+LMT  R+RHIPV+  D   +LGMVSIGD+V  +VA H+ +   +  +I G Y
Sbjct:   55 TVADVLKSKGKSADGSWLWCTTEDSVYDAVKSMTQHNVGALVVVKPGQNKSIAGIVTERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVNPDTKVLQAMQLMTENRVRHIPVI--DGTGMLGMVSIGDVVRAVVAEHREELNRLNDYIQGGY 205          
BLAST of Gchil8930.t1 vs. uniprot
Match: A0A5J4Z2J7_PORPP (CBS domain-containing protein CBSX3, mitochondrial n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z2J7_PORPP)

HSP 1 Score: 135 bits (340), Expect = 1.950e-36
Identity = 69/128 (53.91%), Postives = 92/128 (71.88%), Query Frame = 0
Query:   61 DALVYDAVKEMVKHNIGSLIIVEGFNKKPVGIVTETDYLNKVIVRGRSSKSTLVRDIMSTKEFTFVNPDATLSHCMELMTGRRIRHIPVVEEDTNKVLGMVSIGDIVSELVAAHKRDAEHMRSFISGS 188
            D LV +AV+EMVKHNIGSL++ +  N+KPVGIVTE DYL KV+V GR S ST V+DIMSTK   +V P AT+ +CM+LM    + HIPV+E+  NK+ G++S+GD+V +LV       + M  FI+GS
Sbjct:   99 DDLVIEAVREMVKHNIGSLVVTQ--NEKPVGIVTERDYLEKVVVLGRKSDSTYVKDIMSTKSLVWVTPSATVGYCMDLMAEMSVTHIPVIEQ--NKLRGVISMGDVVKDLVKYFHEQQKVMSDFIAGS 222          
BLAST of Gchil8930.t1 vs. uniprot
Match: J3LSM1_ORYBR (Uncharacterized protein n=3 Tax=Oryzeae TaxID=147380 RepID=J3LSM1_ORYBR)

HSP 1 Score: 133 bits (334), Expect = 9.500e-36
Identity = 76/165 (46.06%), Postives = 107/165 (64.85%), Query Frame = 0
Query:   31 SSEQSHSERSLGTVRDVLKTKGEK----FFYTFGDALVYDAVKEMVKHNIGSLIIVE-GFNKKPVGIVTETDYLNKVIVRGRSSKSTLVRDIMSTK-EFTFVNPDATLSHCMELMTGRRIRHIPVVEEDTNKVLGMVSIGDIVSELVAAHKRDAEHMRSFISGSY 189
            S++   S     TV D+LK+KG+     + +   D  VYDAVK M +HN+G+L++V+ G +K   GIVTE DYL K+IV+GRSSKST V DIM+ + +   V P   +   M+LMT +RIRHIPV+E+ T  V GMVSIGDIV  +V+ H+ +   + ++I G Y
Sbjct:   43 SAQIEESGFETATVADILKSKGKSADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGQDKVIAGIVTERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVKPGTRVLQAMQLMTEKRIRHIPVIEDGTGMV-GMVSIGDIVRAVVSEHREELNRLNAYIQGGY 206          
BLAST of Gchil8930.t1 vs. uniprot
Match: A0A540N0N3_MALBA (Uncharacterized protein n=6 Tax=Maleae TaxID=721813 RepID=A0A540N0N3_MALBA)

HSP 1 Score: 133 bits (334), Expect = 9.760e-36
Identity = 71/152 (46.71%), Postives = 101/152 (66.45%), Query Frame = 0
Query:   44 VRDVLKTKGE----KFFYTFGDALVYDAVKEMVKHNIGSLIIVE-GFNKKPVGIVTETDYLNKVIVRGRSSKSTLVRDIMSTK-EFTFVNPDATLSHCMELMTGRRIRHIPVVEEDTNKVLGMVSIGDIVSELVAAHKRDAEHMRSFISGSY 189
            + DVL  KG+     + +   D  VYDAVK M++HN+G+L++V+ G  K P GI+TE DYL K+IV+GRSS+ST V DIM+ + +   V PD  +   M+LMT  RIRHIPV+  D  K++GMVSIGD+V  +V+ H+ +   + +FI G Y
Sbjct:   58 IADVLNAKGKGADGSWLWCTTDDSVYDAVKSMIQHNVGALVVVKSGEQKSPAGIITERDYLRKIIVQGRSSRSTKVGDIMTEENKLITVTPDTKVLWAMQLMTDNRIRHIPVM--DNGKMVGMVSIGDVVRAVVSEHREELSRLNAFIQGGY 207          
The following BLAST results are available for this feature:
BLAST of Gchil8930.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IK21_9FLOR2.250e-10081.54CBS domain-containing protein CBSX3, mitochondrial... [more]
R7QA65_CHOCR4.150e-8073.51Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S1XFL2_9RHOD2.390e-5057.32Hypothetical protein n=2 Tax=Compsopogon caeruleus... [more]
A0A1X6PEM3_PORUM2.500e-4555.48Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
M2W8E0_GALSU2.180e-4453.29IMP dehydrogenase n=1 Tax=Galdieria sulphuraria Ta... [more]
A9RR66_PHYPA8.900e-3749.67Predicted protein n=1 Tax=Physcomitrium patens Tax... [more]
B4G1D2_MAIZE1.640e-3649.02CBS domain protein n=18 Tax=Panicoideae TaxID=1473... [more]
A0A5J4Z2J7_PORPP1.950e-3653.91CBS domain-containing protein CBSX3, mitochondrial... [more]
J3LSM1_ORYBR9.500e-3646.06Uncharacterized protein n=3 Tax=Oryzeae TaxID=1473... [more]
A0A540N0N3_MALBA9.760e-3646.71Uncharacterized protein n=6 Tax=Maleae TaxID=72181... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000644CBS domainSMARTSM00116cbs_1coord: 54..103
e-value: 0.0012
score: 28.1
coord: 122..171
e-value: 1.6E-7
score: 41.0
IPR000644CBS domainPFAMPF00571CBScoord: 114..171
e-value: 9.5E-14
score: 51.6
coord: 55..101
e-value: 7.7E-6
score: 26.3
IPR000644CBS domainPROSITEPS51371CBScoord: 118..176
score: 13.959546
IPR000644CBS domainPROSITEPS51371CBScoord: 49..109
score: 10.491242
NoneNo IPR availableGENE3D3.10.580.10coord: 37..189
e-value: 2.0E-41
score: 143.1
NoneNo IPR availablePANTHERPTHR43080CBS DOMAIN-CONTAINING PROTEIN CBSX3, MITOCHONDRIALcoord: 27..189
NoneNo IPR availableSUPERFAMILY54631CBS-domain paircoord: 43..171
IPR044725CBS domain-containing protein CBSX3, CBS domainCDDcd04623CBS_pair_bac_eukcoord: 61..167
e-value: 1.59712E-46
score: 146.792

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004370_piloncontigtig00004370_pilon:208681..209250 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil8930.t1Gchil8930.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004370_pilon 208681..209250 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil8930.t1 ID=Gchil8930.t1|Name=Gchil8930.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=190bp
MALLRRSATLFRTLAYQNLRPLTSPTSTETSSEQSHSERSLGTVRDVLKT
KGEKFFYTFGDALVYDAVKEMVKHNIGSLIIVEGFNKKPVGIVTETDYLN
KVIVRGRSSKSTLVRDIMSTKEFTFVNPDATLSHCMELMTGRRIRHIPVV
EEDTNKVLGMVSIGDIVSELVAAHKRDAEHMRSFISGSY*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000644CBS_dom
IPR044725CBSX3_CBS_dom