Gchil7461.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7461.t1
Unique NameGchil7461.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length135
Homology
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BLAST of Gchil7461.t1 vs. uniprot
Match: R7Q5J3_CHOCR (Coiled-coil domain-containing protein 86 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q5J3_CHOCR)

HSP 1 Score: 114 bits (285), Expect = 4.610e-30
Identity = 68/121 (56.20%), Postives = 80/121 (66.12%), Query Frame = 0 
Query:    7 SDLPPPQLPPRLGVTAVPSSKGHRPWKKRKRRPAAAQRRTAALKLTLDQKNRRREQRETLRSIVRAAKEADAAXXXXXXXXXXXXXXXXXXNEARGTQKVVITNPKKLARMSKKQFLNYVH 127
            +D P P  P    +  VPS+KGHRPWKK K R A+AQRRTA+LK++L+ KN+RR+ R  L  IV+AAKEADA                   NE R TQKVVITNPKKLARMSKKQ+L YVH
Sbjct:   15 TDAPNPTKPQ---IALVPSTKGHRPWKKPKTRRASAQRRTASLKISLEMKNKRRQDRAALLRIVKAAKEADANSKQAERKRRADKRKLKEENERRSTQKVVITNPKKLARMSKKQYLKYVH 132
The following BLAST results are available for this feature:
BLAST of Gchil7461.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
R7Q5J3_CHOCR4.610e-3056.20Coiled-coil domain-containing protein 86 n=1 Tax=C... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 66..106
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 28..43
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..45
IPR005579Cgr1-likePFAMPF03879Cgr1coord: 28..122
e-value: 1.2E-5
score: 25.6
IPR026570Coiled-coil domain-containing protein 86PANTHERPTHR13557UNCHARACTERIZEDcoord: 27..122

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000007_piloncontigtig00000007_pilon:1347730..1348134 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7461.t1Gchil7461.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000007_pilon 1347730..1348134 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7461.t1 ID=Gchil7461.t1|Name=Gchil7461.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=135bp
MQTEIASDLPPPQLPPRLGVTAVPSSKGHRPWKKRKRRPAAAQRRTAALK
LTLDQKNRRREQRETLRSIVRAAKEADAAAKEAERNRIAEKRKRDAENEA
RGTQKVVITNPKKLARMSKKQFLNYVHNNNLKKE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005579Cgr1-like
IPR026570CCDC86