Gchil9186.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil9186.t1
Unique Name	Gchil9186.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	341

Homology

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BLAST of Gchil9186.t1 vs. uniprot
Match: A0A2V3IR85_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IR85_9FLOR)

HSP 1 Score: 305 bits (782), Expect = 5.650e-99
Identity = 176/353 (49.86%), Postives = 224/353 (63.46%), Query Frame = 0

Query:   10 LALFAALAHGQRLQIYQASVPGPISGWSAGPVLPPKITLCANDLPSPFTVVCIPDEGMSASSAKFYLNSVVVRTERQLPYVITGDMSSKGAFPWNNPPTVSEITCMLSGGQTVTSTILFSCDDD----------TETPTTXXXXXXXXXXXXXXXXXXXXXXRSSGTS--------------ACVYIPATGYESKTGAWMEGGGGMEYKFSDSTTKVDRAGLATMTYSFVAPLTARYGVTVDMLTSHGTEHNDIWLEVDGVPFTLVKKGSSQDGKSGMNKAYHNNNGRSKLVYTVDFNAHVFSTKPALEAGASYVVNIGGRSTKIRVYAIILFPCDAFGCAPGNQWNSAVNTC 338
            L L  ALA+ Q L+IYQASVPG +S W  GP+L  + TLC   +PSP TVVC+P       SA FY++    RTER +PY + GD    GA PW     V++++C+LS G +V STI F+C D           T  PTT     XXXXXXXXXXXXXXXXX                    +C+YI AT Y  KTGAW     GM YK ++ +T +D+ G+AT+ Y+F    + RY +TVDM T HGTEHND+W+E+  VPFTLV+   ++ G +GMNKAYHN NGRSK VYTVDF+ HVFST+ ALEAG  Y V +GGRSTK+ ++ +ILFPC  F CA G +WN+A+N+C
Sbjct:    7 LPLLLALANCQTLRIYQASVPGRMSNWQPGPLLQSESTLCPKHIPSPLTVVCLPGADKHVKSASFYIDGDFERTERVMPYTLKGDTFKAGARPWITRARVTKVSCVLSNGDSVASTITFACPDPSGPRSDVAPTTVPPTTTAASTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSCIYIDATKYMEKTGAWELVSNGMAYKRNNPSTGIDKPGVATLRYAFTPTESKRYTLTVDMTTDHGTEHNDVWVEIANVPFTLVQGSKTRPGAAGMNKAYHNKNGRSKTVYTVDFDGHVFSTRDALEAGKRYEVKVGGRSTKVVLHGVILFPCSDFSCAHGGKWNAALNSC 359

The following BLAST results are available for this feature:

BLAST of Gchil9186.t1 vs. uniprot

BLAST of Gchil9186.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IR85_9FLOR	5.650e-99	49.86	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..3
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 15..19
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 20..340
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 4..14
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..19

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00004370_pilon	contig	tig00004370_pilon:2346995..2348017 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil9186.t1	Gchil9186.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00004370_pilon 2346995..2348017 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil9186.t1 ID=Gchil9186.t1|Name=Gchil9186.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=341bp
MHSSAFALALALFAALAHGQRLQIYQASVPGPISGWSAGPVLPPKITLCA
NDLPSPFTVVCIPDEGMSASSAKFYLNSVVVRTERQLPYVITGDMSSKGA
FPWNNPPTVSEITCMLSGGQTVTSTILFSCDDDTETPTTDAPPTTMPPTT
MPAAPPAAAAPRSSGTSACVYIPATGYESKTGAWMEGGGGMEYKFSDSTT
KVDRAGLATMTYSFVAPLTARYGVTVDMLTSHGTEHNDIWLEVDGVPFTL
VKKGSSQDGKSGMNKAYHNNNGRSKLVYTVDFNAHVFSTKPALEAGASYV
VNIGGRSTKIRVYAIILFPCDAFGCAPGNQWNSAVNTCSA*