Gchil7610.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7610.t1
Unique NameGchil7610.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length291
Homology
BLAST of Gchil7610.t1 vs. uniprot
Match: A0A2V3ITR4_9FLOR (Exosome complex component RRP4 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITR4_9FLOR)

HSP 1 Score: 484 bits (1245), Expect = 3.680e-171
Identity = 241/283 (85.16%), Postives = 268/283 (94.70%), Query Frame = 0
Query:    8 SFVIFRPKRVSDNTDAVSRLAHVPITSPGSIIPTEDHSVRARGTLLSNTESGSVLTATRAGVISRVNKLVMVMPLRARYIPETGDVVVGRVVEIASKRYRIDVNATKHAFLLLTAINLPGGVQRRRNQEDELNMRKYFKEGDLVSAEVQEQRKDGTVALHTRSLRYGKLSGGQLVTVQSELVKRAKKHFHELPCGVHTILGNNGYVFLSSMQNGPLSVEMRRRIARVANSVLALDSEFIAIGPDTIMDAYETSISNSVQVKDMCQPDIMRSICMGARSMRDAA 290
            SF I RPKR+SDN + VSRL+HVPITSPGS+IPTEDHSVRARGTLLS  ESG+VLTATRAGVISRVNKLVMVMPLR+RYIPETGDVVVGRVVEIA+KRY++DVNATKHAFLLLTAINLPGGV RRRNQEDELNMR+YFKEGDLVSAEVQE+RKDG+VALHTRSLRYGKLS GQLVTVQSELVKRAKKHFHELPCGVHTILGNNG++FLS  + G +S+EMRRRIARVANS+LALDSEFIAIGPDTIMD Y+TS++N V+VKDMC PD+++SIC+GARSMR+AA
Sbjct:   10 SFTILRPKRLSDNAEPVSRLSHVPITSPGSVIPTEDHSVRARGTLLSCGESGNVLTATRAGVISRVNKLVMVMPLRSRYIPETGDVVVGRVVEIANKRYKMDVNATKHAFLLLTAINLPGGVHRRRNQEDELNMRQYFKEGDLVSAEVQERRKDGSVALHTRSLRYGKLSAGQLVTVQSELVKRAKKHFHELPCGVHTILGNNGFIFLSQTRKGAISLEMRRRIARVANSILALDSEFIAIGPDTIMDVYQTSLANGVEVKDMCTPDVVKSICVGARSMREAA 292          
BLAST of Gchil7610.t1 vs. uniprot
Match: R7Q340_CHOCR (KH_dom_type_1 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q340_CHOCR)

HSP 1 Score: 370 bits (949), Expect = 3.450e-126
Identity = 194/286 (67.83%), Postives = 225/286 (78.67%), Query Frame = 0
Query:    8 SFVIFRPKRVSDNTDAVSRLAHVPITSPGSIIPTEDHSVRARGTLLSNTESGSVLTATRAGVISRVNKLVMVMPLRARYIPETGDVVVGRVVEIASKRYRIDVNATKHAFLLLTAINLPGGVQRRRNQEDELNMRKYFKEGDLVSAEVQEQRKDGTVALHTRSLRYGKLSGGQLVTVQSELVKRAKKHFHELPCGVHTILGNNGYVFLSSM---QNGPLSVEMRRRIARVANSVLALDSEFIAIGPDTIMDAYETSISNSVQVKDMCQPDIMRSICMGARSMRDAA 290
            +F I RP   S    A + L+H+PIT PGS IPTED SVRARGTLLS T S  VLTAT AGVI+RVNKLVMV PLRA+YIPETGDVV+GRV ++A +R+R+DVNA +HA LLL+A+NLPGG+QRRR  +DELNMR +F EGDLVSAEVQEQ  DG VALHTRSLRYGKLSGG  V VQ ELVKRAKKHFH L CGVH ILGNNGY+FL+     + G  + EMR+ +ARV N+VLALD+EFIAIGPDTIM  Y+ SI   V+++DM +PDI   IC GARSMR AA
Sbjct:    5 TFSIVRPPPPST---ASAPLSHIPITIPGSTIPTEDLSVRARGTLLSTTGSTRVLTATVAGVITRVNKLVMVRPLRAKYIPETGDVVIGRVTDLAGRRWRLDVNAARHAILLLSAVNLPGGIQRRRTYQDELNMRAFFTEGDLVSAEVQEQWDDGCVALHTRSLRYGKLSGGTFVPVQPELVKRAKKHFHRLDCGVHAILGNNGYIFLAERAEKEGGATTPEMRKMVARVRNAVLALDTEFIAIGPDTIMSVYDASIEEGVELRDMTRPDITAKICEGARSMRAAA 287          
BLAST of Gchil7610.t1 vs. uniprot
Match: A0A2V3IQJ5_9FLOR (Exosome complex component RRP4 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQJ5_9FLOR)

HSP 1 Score: 356 bits (914), Expect = 5.230e-120
Identity = 192/287 (66.90%), Postives = 229/287 (79.79%), Query Frame = 0
Query:    8 SFVIFRPKRVSDNTDAVSRLAHVPITSPGSIIPTEDHSVRARGTLLSNTESGSVLTATRAGVISRVNKLVMVMPLRARYIPETGDVVVGRVVEIASKRYRIDVNATKHAFLLLTAINLPGGVQRRRNQEDELNMRKYFKEGDLVSAEVQEQRKDGTVALHTRSLRYG----KLSGGQLVTVQSELVKRAKKHFHELPCGVHTILGNNGYVFLSSMQNGPLSVEMRRRIARVANSVLALDSEFIAIGPDTIMDAYETSISNSVQVKDMCQPDIMRSICMGARSMRDAA 290
            SF I RPKR+SDN +AVSRL+HVPITSPGS+I TEDHSVR R TLLS  ESG+VLTATRAG ISRVNKLVMV+PL +RYI ETGDVV GRVVEIASKRY++DVNATK AFLLLTAI LPGGV RRRNQEDELNMR+Y     ++ + ++ +  + T A  +    YG     + GGQLVT+QSELVKRAKKHFHELPCGVH  L +NG+VFLS  +   + +++  RI RV+N++LALDSEF AIGPDTIM AYETS +N ++VKDMC PD+++ I MGARSMR+AA
Sbjct:   10 SFTILRPKRLSDNAEAVSRLSHVPITSPGSVILTEDHSVRVRRTLLSCGESGNVLTATRAGFISRVNKLVMVVPLCSRYILETGDVVGGRVVEIASKRYKMDVNATKLAFLLLTAIKLPGGVHRRRNQEDELNMREYCISKRVIWSVLKFRNDEKTAASPSTRECYGIESCPVDGGQLVTLQSELVKRAKKHFHELPCGVHMTLRDNGFVFLSQTRKNAILLQIWWRIGRVSNNILALDSEFNAIGPDTIMYAYETSPANGMEVKDMCTPDVVKIIGMGARSMREAA 296          
BLAST of Gchil7610.t1 vs. uniprot
Match: A0A2V3IW84_9FLOR (Exosome complex component RRP4 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IW84_9FLOR)

HSP 1 Score: 350 bits (897), Expect = 1.990e-117
Identity = 191/283 (67.49%), Postives = 217/283 (76.68%), Query Frame = 0
Query:    8 SFVIFRPKRVSDNTDAVSRLAHVPITSPGSIIPTEDHSVRARGTLLSNTESGSVLTATRAGVISRVNKLVMVMPLRARYIPETGDVVVGRVVEIASKRYRIDVNATKHAFLLLTAINLPGGVQRRRNQEDELNMRKYFKEGDLVSAEVQEQRKDGTVALHTRSLRYGKLSGGQLVTVQSELVKRAKKHFHELPCGVHTILGNNGYVFLSSMQNGPLSVEMRRRIARVANSVLALDSEFIAIGPDTIMDAYETSISNSVQVKDMCQPDIMRSICMGARSMRDAA 290
            SF I RPKR+SDN +AVSRL+HVPITSPGS+I  EDHSVRAR TLLS  ES +VLTAT AGVISRVNKLVMVMPLR+RYI ETG VV GRVVEIASKRY++DVNATK AFLLLTAI LPG V RRRNQEDELNMR+YFKEGDL                              LVT+QSELVKRAKKHFHELPCGVH  L NNG+VFLS  +   + +E+  RIARV+N++LALDSEF  IGPDTIM AYETS++N ++VKDMC PD+++ I MGAR MR+AA
Sbjct:   10 SFTILRPKRLSDNAEAVSRLSHVPITSPGSVILAEDHSVRARRTLLSCGESENVLTATHAGVISRVNKLVMVMPLRSRYILETGVVVGGRVVEIASKRYKMDVNATKIAFLLLTAIKLPGNVHRRRNQEDELNMREYFKEGDL------------------------------LVTLQSELVKRAKKHFHELPCGVHMTLHNNGFVFLSQTRKDAILLEIWWRIARVSNNILALDSEFNEIGPDTIMYAYETSLANGMEVKDMCTPDVVKIIGMGARPMREAA 262          
BLAST of Gchil7610.t1 vs. uniprot
Match: A0A2V3IDP5_9FLOR (Exosome complex component rrp4 n=5 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDP5_9FLOR)

HSP 1 Score: 265 bits (676), Expect = 5.250e-86
Identity = 140/173 (80.92%), Postives = 156/173 (90.17%), Query Frame = 0
Query:    8 SFVIFRPKRVSDNTDAVSRLAHVPITSPGSIIPTEDHSVRARGTLLSNTESGSVLTATRAGVISRVNKLVMVMPLRARYIPETGDVVVGRVVEIASKRYRIDVNATKHAFLLLTAINLPGGVQRRRNQEDELNMRKYFKEGDLVSAEVQEQRKDGTVALHTRSLRYGKLSGGQ 180
            SF I RPKR+SDN +AVSRL+HVPITSPGS+I TEDHSVRAR TLLS  ESG+VLTATRAGVISRVNKLVMVMPLR+ YI ETGDVV GRVVEI+SK Y++DVNATK AFLLLTAI LPGGV+RRRNQEDE+NMR+ F+EGDLVSAEVQE+RKDG+VALH R LRY KLSGG+
Sbjct:   10 SFTILRPKRLSDNAEAVSRLSHVPITSPGSVILTEDHSVRARRTLLSCGESGNVLTATRAGVISRVNKLVMVMPLRSPYILETGDVVGGRVVEISSKLYKMDVNATKLAFLLLTAIKLPGGVRRRRNQEDEINMRESFREGDLVSAEVQERRKDGSVALHARMLRYRKLSGGR 182          
BLAST of Gchil7610.t1 vs. uniprot
Match: M2XZF0_GALSU (Ribosomal RNA-processing protein 4 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XZF0_GALSU)

HSP 1 Score: 247 bits (630), Expect = 1.240e-77
Identity = 128/272 (47.06%), Postives = 181/272 (66.54%), Query Frame = 0
Query:   34 SPGSIIPTEDHSVRARGTLLSNTESGSVLTATRAGVISRVNKLVMVMPLRARYIPETGDVVVGRVVEIASKRYRIDVNATKHAFLLLTAINLPGGVQRRRNQEDELNMRKYFKEGDLVSAEVQEQRKDGTVALHTRSLRYGKLSGGQLVTVQSELVKRAKKHFHELPCGVHTILGNNGYV-----------------FLSSMQNGPLSVEMRRRIARVANSVLALDSEFIAIGPDTIMDAYETSISNSVQVKDMCQPDIMRSICMGARSMRD 288
            +PG  I +++  VR  GT++  T     LT+T AG++ RVNKLV V+P+RARY  E GDV+VGR+ +I S+R+++DVN+ + A LLL+A+NLPGGVQRRR  EDEL MR++F + DL+SAEVQE ++DG + LHTRSL+YGKL  G  ++V  +LVKR+KKHFH L CGVH ILG+NGYV                 F    +N   ++E R  + RV NS+  LD  F++I P+TIM  YE +I  ++ V+ M +PDI+  I    ++ ++
Sbjct:   32 APGDDILSQESVVRGHGTMVQGTR----LTSTVAGIVERVNKLVAVLPIRARYSAEVGDVIVGRIRDIVSRRWKVDVNSRQDAVLLLSAVNLPGGVQRRRTYEDELKMREFFDQDDLISAEVQELKQDGLIMLHTRSLKYGKLENGIFISVTPQLVKRSKKHFHRLSCGVHIILGDNGYVWIYVDDAAYGEDEEEANFSKRRENDKSNLEQRLSLIRVRNSICILDLYFLSIQPETIMLIYEETIRRNIPVQHMLRPDIINDIYRTVKNTKE 299          
BLAST of Gchil7610.t1 vs. uniprot
Match: A0A1X6NNN7_PORUM (KH_dom_type_1 domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NNN7_PORUM)

HSP 1 Score: 247 bits (631), Expect = 6.140e-77
Identity = 150/335 (44.78%), Postives = 187/335 (55.82%), Query Frame = 0
Query:   13 RPKRVSDNTDAV-------SRLAHVPITSPGSIIPTEDHSVRARGTLLS------------------NTESGSVLTATRAGVISRVNKLVMVMPLRARYIPETGDVVVGRVVEIASKRYRIDVNATKHAFLLLTAINLPGGVQRRRNQEDELNMRKYFKEGDLVSAEVQEQRKDGTVALHTRSLRYGKLSGGQLVTVQSELVKRAKKHFHELPCGVHTILGNNGYVFLSSMQ--------------------------------NGPLSVEMRRRIARVANSVLALDSEFIAIGPDTIMDAYETSISNSVQVKDMCQPDIMRSICMGARSMRDAA 290
            RP R  + T AV         L+HVP+   G  I  E   +R  GT L+                    + G  L AT  GV+ RVN+LV V PLR+RY P+ GDVVV RVV+IA+KR+R DV   +HA L L+A+NLPGGVQRRR   DE NMR+ F+EGDL+SAEVQE R DG +ALHTRSL+YGKL GG LV     LVKR+KKHFH L CGV  ILGNNGY++LS                                   +  L VE+R  +ARV N++ ALD +F+AI   TIMD ++ S +  V V DM +P ++  I   AR  R  A
Sbjct:   30 RPARAMEVTRAVRPPPRSTDHLSHVPVVVTGDGIAVEPGFLRGHGTQLTAAGVAXXXXXXXXXXXXXTPDDGRALRATLTGVVKRVNQLVAVAPLRSRYAPQVGDVVVARVVDIAAKRWRCDVAGQQHAALALSAVNLPGGVQRRRTAADERNMRELFEEGDLLSAEVQELRHDGGIALHTRSLKYGKLVGGVLVVASPALVKRSKKHFHLLGCGVWAILGNNGYIWLSPTDPAGGRGAARDAMEEADESDGGAADGGDAAAPVDAELGVEVRLTLARVRNAIAALDQQFVAIHAATIMDVFDASETAGVDVADMSRPAVVELITATARERRVVA 364          
BLAST of Gchil7610.t1 vs. uniprot
Match: A0A3P3YCJ4_PLABS (Ribosomal RNA-processing protein 4 n=2 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3YCJ4_PLABS)

HSP 1 Score: 233 bits (594), Expect = 4.140e-72
Identity = 128/274 (46.72%), Postives = 173/274 (63.14%), Query Frame = 0
Query:   14 PKRVSDNTDAVSRLAHVPITSPGSIIPTEDHSVRARGTLLSNTESGSVLTATRAGVISRVNKLVMVMPLRARYIPETGDVVVGRVVEIASKRYRIDVNATKHAFLLLTAINLPGGVQRRRNQEDELNMRKYFKEGDLVSAEVQEQRKDGTVALHTRSLRYGKLSGGQLVTVQSELVKRAKKHFHELP-CGVHTILGNNGYVFLSSMQNGP---LSVEMRRRIARVANSVLALDSEFIAIGPDTIMDAYETSISNSVQVKDMCQPDIMRSICMGA 283
            P R    T ++  L   P  SPG +I TE   +   GT L   E    L AT AG + +VNKL+ V PL  RY  + GDVV+GRV ++  KR+++D+N+ +   L+L++I+LPGGVQRRR QED L MR++F+EGDL+SAEVQ    DG VALHTRS +YGKL+ GQ V V+  LVKR K+HF  LP C V  ILGNNGY++++   +G     S E R+++ARV  S++ALD  F+AI PD++MD Y  SI   V   D+   D +  +   A
Sbjct:   29 PCRTLYRTMSIRSLHANPFVSPGEVITTESGFLWGHGTKLG--EEDKQLRATVAGFVEQVNKLLTVRPLTQRYAGDIGDVVIGRVTQVGDKRWKVDINSRQDGILMLSSIHLPGGVQRRRTQEDSLQMREFFEEGDLISAEVQNFYHDGAVALHTRSSKYGKLNRGQFVVVRQALVKRCKQHFVTLPDCNVDIILGNNGYIWITESSDGSGAGESAERRQQMARVRQSIVALDRMFVAIFPDSVMDVYHDSIDLGVSPADITHRDYIHRVTQKA 300          
BLAST of Gchil7610.t1 vs. uniprot
Match: C3ZTA6_BRAFL (Ribosomal RNA-processing protein 4 n=4 Tax=Branchiostoma TaxID=7737 RepID=C3ZTA6_BRAFL)

HSP 1 Score: 225 bits (574), Expect = 1.810e-69
Identity = 123/255 (48.24%), Postives = 165/255 (64.71%), Query Frame = 0
Query:   32 ITSPGSIIPTEDHSVRARGTLLSNTESGSVLTATRAGVISRVNKLVMVMPLRARYIPETGDVVVGRVVEIASKRYRIDVNATKHAFLLLTAINLPGGVQRRRNQEDELNMRKYFKEGDLVSAEVQEQRKDGTVALHTRSLRYGKLSGGQLVTVQSELVKRAKKHFHELPCGVHTILGNNGYVFLSSMQNG--PLSVEMRRRIARVANSVLALDSEFIAIGPDTIMDAYETSISNSVQVKDMCQPDIMRSICMGAR 284
            + +PG +I T+   +R  GT + + +    L A+ AGV+ RVNKL+ V PL+ RY  E GDVVVGRV E+  +R+R+DVN+   A L+L+A+NLPGG  RRR+ EDEL MR+Y  EGDL+SAEVQ    DG ++LHTRSL+YGKL+ G +V V   LVKR K HFH LPCG   ILGNNGYV++S   N   P+    R  IAR+ N +L+L +  + +   +++ AYE S     QVKD+ QPDI   +    R
Sbjct:   23 LVTPGDVITTDTGYMRGHGTYMDDDK----LKASLAGVVERVNKLICVQPLKTRYNGEIGDVVVGRVTEVGQRRWRVDVNSRLDAVLMLSAVNLPGGELRRRSAEDELMMREYLVEGDLISAEVQAIFHDGALSLHTRSLKYGKLAQGVMVQVSPSLVKRRKTHFHNLPCGASVILGNNGYVWISPTVNDEKPVPSTDREVIARLRNCILSLATHKLMLYDTSVLYAYEAS--RQYQVKDLLQPDIAEKVADDTR 271          
BLAST of Gchil7610.t1 vs. uniprot
Match: A0A0L0HQ67_SPIPD (Ribosomal RNA-processing protein 4 n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HQ67_SPIPD)

HSP 1 Score: 220 bits (560), Expect = 4.850e-67
Identity = 121/271 (44.65%), Postives = 168/271 (61.99%), Query Frame = 0
Query:   32 ITSPGSIIPTEDHSVRARGTLLSNTESGSVLTATRAGVISRVNKLVMVMPLRARYIPETGDVVVGRVVEIASKRYRIDVNATKHAFLLLTAINLPGGVQRRRNQEDELNMRKYFKEGDLVSAEVQEQRKDGTVALHTRSLRYGKLSGGQLVTVQSELVKRAKKHFHELPCGVHTILGNNGYVFLSSM-----------------QNGPLSVEMRRRIARVANSVLALDSEFIAIGPDTIMDAYETSISNSVQVKDMCQPDIMRSICMGARS 285
            I +PG ++  +   +R  GT   +      L A+ AGV+ RVNKL+ V PLR RY  E GDVVVGR+ E+  +R+++D+NA + A LLL+++NLPGGVQRR+ + DEL MR +F EGD++SAEVQ   +DG  +LHTRS++YGKL  G LV V S LVKR K HF  LPCGV  ILG NGY++++                   +N P+S   R+ IARV +S++AL      I    I+  +E S+ + V  KDM +PDI + I + AR+
Sbjct:   31 IVTPGEVVTRDTAFMRGHGTYTED----DALVASMAGVVDRVNKLISVRPLRTRYNGEIGDVVVGRITEVGPRRWKVDINARQDAVLLLSSVNLPGGVQRRKTESDELQMRSFFGEGDMLSAEVQAFFQDGAASLHTRSIKYGKLRNGSLVIVPSALVKRTKSHFATLPCGVDVILGLNGYIWVAKHVAISPEIVNQPDALYHNENEPISDAERQTIARVCSSIVALSRHNNFINDTMIVYTFEASMGHPV--KDMLKPDICQQIVLAARA 295          
The following BLAST results are available for this feature:
BLAST of Gchil7610.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3ITR4_9FLOR3.680e-17185.16Exosome complex component RRP4 n=1 Tax=Gracilariop... [more]
R7Q340_CHOCR3.450e-12667.83KH_dom_type_1 domain-containing protein n=1 Tax=Ch... [more]
A0A2V3IQJ5_9FLOR5.230e-12066.90Exosome complex component RRP4 n=1 Tax=Gracilariop... [more]
A0A2V3IW84_9FLOR1.990e-11767.49Exosome complex component RRP4 n=1 Tax=Gracilariop... [more]
A0A2V3IDP5_9FLOR5.250e-8680.92Exosome complex component rrp4 n=5 Tax=Gracilariop... [more]
M2XZF0_GALSU1.240e-7747.06Ribosomal RNA-processing protein 4 n=1 Tax=Galdier... [more]
A0A1X6NNN7_PORUM6.140e-7744.78KH_dom_type_1 domain-containing protein n=1 Tax=Po... [more]
A0A3P3YCJ4_PLABS4.140e-7246.72Ribosomal RNA-processing protein 4 n=2 Tax=Plasmod... [more]
C3ZTA6_BRAFL1.810e-6948.24Ribosomal RNA-processing protein 4 n=4 Tax=Branchi... [more]
A0A0L0HQ67_SPIPD4.850e-6744.65Ribosomal RNA-processing protein 4 n=2 Tax=Spizell... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022967RNA-binding domain, S1SMARTSM00316S1_6coord: 89..169
e-value: 0.0025
score: 27.1
NoneNo IPR availableGENE3D2.40.50.100coord: 32..86
e-value: 2.2E-15
score: 57.9
NoneNo IPR availableGENE3D2.40.50.140coord: 87..177
e-value: 1.1E-20
score: 75.4
NoneNo IPR availablePANTHERPTHR21321:SF4EXOSOME COMPLEX COMPONENT RRP4coord: 20..276
NoneNo IPR availableCDDcd05789S1_Rrp4coord: 85..176
e-value: 1.29941E-34
score: 118.806
IPR004088K Homology domain, type 1PFAMPF15985KH_6coord: 179..217
e-value: 4.5E-9
score: 36.6
IPR026699Exosome complex RNA-binding protein 1/RRP40/RRP4PANTHERPTHR21321PNAS-3 RELATEDcoord: 20..276
IPR003029S1 domainPROSITEPS50126S1coord: 91..169
score: 9.401798
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 84..176
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 179..284

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000007_piloncontigtig00000007_pilon:2202471..2203343 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7610.t1Gchil7610.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000007_pilon 2202471..2203343 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7610.t1 ID=Gchil7610.t1|Name=Gchil7610.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=291bp
MDVDKQNSFVIFRPKRVSDNTDAVSRLAHVPITSPGSIIPTEDHSVRARG
TLLSNTESGSVLTATRAGVISRVNKLVMVMPLRARYIPETGDVVVGRVVE
IASKRYRIDVNATKHAFLLLTAINLPGGVQRRRNQEDELNMRKYFKEGDL
VSAEVQEQRKDGTVALHTRSLRYGKLSGGQLVTVQSELVKRAKKHFHELP
CGVHTILGNNGYVFLSSMQNGPLSVEMRRRIARVANSVLALDSEFIAIGP
DTIMDAYETSISNSVQVKDMCQPDIMRSICMGARSMRDAA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022967S1_dom
IPR004088KH_dom_type_1
IPR026699Exosome_RNA_bind1/RRP40/RRP4
IPR003029S1_domain
IPR012340NA-bd_OB-fold
IPR036612KH_dom_type_1_sf