Gchil9060.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil9060.t1
Unique NameGchil9060.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length245
Homology
BLAST of Gchil9060.t1 vs. uniprot
Match: A0A2V3IJW6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJW6_9FLOR)

HSP 1 Score: 362 bits (928), Expect = 2.080e-124
Identity = 160/245 (65.31%), Postives = 187/245 (76.33%), Query Frame = 0
Query:    1 MRFV-WAALVAALGVCALGRSDLNPCHGVKSTYGKGVTCEKVEFPVGMCSACKLKPFNPFTGSFYNCAAIFDLDNPDCQAKLKRYAAINAHCDPIRLRQVQDFSNPSNRRGLDYFVYSVCEECCDCVPIGARQNQYVWRAQNNQLLNSKRGNCPAHAFYDLCAVLPNIRFSKTPGGQDHWDWPKICPLITKWQFSPASRNWLTKSYVNVDWRISRFLIWFFWDNHCGYWQTWRNCVALEHAQKRV 244
            MR V + A + A+   A  RS +NPCH  K+  G GVTC+KV FP G+C ACKLKPFNP  G FY+C +I++L +P CQ +L+ YA   AHCDP+RLRQ  DFSNPSN R LDYFVYSVCEECCDCVPIG++  +Y WRA  N LL SKRGNCPAHA++D+C VLP IRFSK   GQDHWDWP ICPL+TKW FS  S+NWL KSYV +DWRI+RFL+WFFWDN CG   TW+NCV LE AQKRV
Sbjct:    1 MRCVSFVAALLAVWQLAHARSGINPCHDNKAKQGAGVTCQKVVFPEGLCRACKLKPFNPNNGQFYDCTSIYNLTDPQCQQELRLYARWQAHCDPVRLRQTADFSNPSNVRALDYFVYSVCEECCDCVPIGSKTAEYGWRAPTNNLLASKRGNCPAHAYFDICKVLPKIRFSKNINGQDHWDWPMICPLLTKWLFSKNSQNWLKKSYVYMDWRINRFLVWFFWDNRCGNEVTWKNCVNLESAQKRV 245          
BLAST of Gchil9060.t1 vs. uniprot
Match: A0A2V3IQT2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQT2_9FLOR)

HSP 1 Score: 263 bits (671), Expect = 2.540e-85
Identity = 132/247 (53.44%), Postives = 157/247 (63.56%), Query Frame = 0
Query:    1 MRFVWAALVAALGV-CALGRSDLNPCHGVKSTYGKGVTCEKVEFPVGMCSACKLKPFNPFTGSFYNCAAIFDLDNPDCQAKLKRYAAINAHCDPIRLRQVQDFSNPSNRRGLDYFVYSVCEECCDCVPIGARQNQYVWRAQNNQLLNSKRGNCPAHAFYDLCAVLPNIRFSKTPGGQD--HWDWPKICPLITKWQFSPASRNWLTKSYVNVDWRISRFLIWFFWDNHCGYWQTWRNCVALEHAQKRV 244
            M+ +  ALV    V  A  +S +NPCHG K  YG GVTC  V  P  MC+ CKLKP  P  G F +CA+I+DLD+P C+ +L+ YA  N HCDP R+ QVQD    SNR  LDYFVYSVCEECCDC+P GA  NQY  R +   L N+ RGNCPAHA YD+C V PNI+++   G +D  H DWPKIC  I KW FS   RNWL KS VN+DWRI+RFL  F+ D  C     W  C  LE  Q R+
Sbjct:    1 MKVLTTALVLLSVVYLATAKSGVNPCHGDKDKYGVGVTCTGVRIPGEMCNQCKLKPHLP-DGQFADCASIYDLDDPACRDQLRIYAQENKHCDPQRVAQVQDMGKYSNRLALDYFVYSVCEECCDCIPRGASANQYQQRLEQGTLGNAYRGNCPAHAHYDICRVFPNIKYTMKAGVEDDTHEDWPKICWHIGKWIFSRDGRNWLYKSNVNMDWRIARFLENFWDDVGCWRQTIWTECTGLEGDQGRL 246          
BLAST of Gchil9060.t1 vs. uniprot
Match: R7QF16_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QF16_CHOCR)

HSP 1 Score: 211 bits (538), Expect = 3.580e-65
Identity = 106/248 (42.74%), Postives = 145/248 (58.47%), Query Frame = 0
Query:    1 MRFVWAALVAALGVCALG--RSDLNPCHGVKSTYGKGVTCEKVEFPVGMCSACKLKPFNPFTGSFYNCAAIFDLDNPDCQAKLKRYAAINAHCDPIRLRQVQDFSNPSNRRGLDYFVYSVCEECCDCVPIGARQNQYVWR--AQNNQLLNSKRGNCPAHAFYDLCAVLPNIRFSKTPGGQDHWDWPKICPLITKWQFSPASRNWLTKSYVNVDWRISRFLIWFFWDNHCGYWQTWRNCVALEHAQKRV 244
            M  V  AL+    V +L   +S  NPCH  +     GV CE +  P GMC  C+L  ++   G+F +C AI+ +  P C+++++RY+ +N  CD +R +Q++DF +P NR+ LDYFVYSVCEECCDC+P GAR +QY  R  A+   L +  RGNCPAHA YD+C V P IR    PGG      PK CP I +W FSPAS+ W  +   ++   +  FL  F     C    TW+ C  LE AQ+R+
Sbjct:    1 MNSVPLALLTLAAVLSLASSKSGKNPCHPNRRVESLGVPCEGIYLPPGMCDNCELSAYDS-RGNFNDCQAIYKIGEPACRSQIERYSELNP-CDTVRKKQLEDFDDPDNRKALDYFVYSVCEECCDCIPRGARSSQYEERKRARPRTLTSLVRGNCPAHAHYDICRVWPEIRHVTRPGGTLRLGRPKACPKIREWFFSPASKGWAGQDNTDISRDVRNFLGNFNSVARCRRKSTWQRCTDLEVAQRRI 246          
BLAST of Gchil9060.t1 vs. uniprot
Match: A0A2V3IMM0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMM0_9FLOR)

HSP 1 Score: 194 bits (492), Expect = 1.220e-58
Identity = 94/213 (44.13%), Postives = 124/213 (58.22%), Query Frame = 0
Query:   33 GKGVTCEKVEFPVGMCSACKLKPFNPFTGSFYNCAAIFDLDNPDCQAKLKRYAAINAHCDPIRLRQVQDF-SNPSNRRGLDYFVYSVCEECCDCVPIGARQNQYVWRAQNNQLLNSKRGNCPAHAFYDLCAVLPNIRFSKTPGGQDHWDWPKICPLITKWQFSPASRNWLTKSYVNVDWRISRFLIWFFWDNHCGYWQTWRNCVALEHAQKRV 244
            G  VTC  V  P  +CSACKLKP  P  G F +C +IFDL++  C+A+LK Y  +N HCDP+R  QV    S+   R+GLDYF+YS+CE+CCDC+P G   +QY +R    +L N+ RGNCPAHA YD+C V P IR   + G       P +CP +  W  +P + NWL ++ V     +  FL  F     C     W +CV LE  QKR+
Sbjct:    4 GFNVTCGVVALPPRLCSACKLKPILP-GGHFEDCTSIFDLESQSCRAELKEYVRLNKHCDPVRAEQVPKMMSSGGARQGLDYFIYSICEQCCDCIPRGTHISQYGFRESIGKLFNAGRGNCPAHAVYDVCKVWPKIRGVVSAGESRKVSAPMVCPHLKTWLRNPDNANWLHRNQVKYHPAVGNFLNSFIDAAGCSARPFWESCVRLETKQKRL 215          
BLAST of Gchil9060.t1 vs. uniprot
Match: A0A2V3ID26_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ID26_9FLOR)

HSP 1 Score: 175 bits (444), Expect = 3.180e-51
Identity = 93/226 (41.15%), Postives = 123/226 (54.42%), Query Frame = 0
Query:   19 RSDLNPCHGVKSTYGKGVTCEKVEFPVGMCSACKLKPFNPFTGSFYNCAAIFDLDNPDCQAKLKRYAAINAHCDPIRLRQVQDFSNPSNRRGLDYFVYSVCEECCDCVPIGARQNQYVWRAQNNQLLNSKRGNCPAHAFYDLCAVLPNIRFSKTPGGQDHWDWPKICPLITKWQFSPASRNWLTKSYVNVDWRISRFLIWFFWDNHCGYWQTWRNCVALEHAQKRV 244
            R DL PCH  K +      C +V  P  +CS C L+      G F +C +I++LD P C+AKL+RY  IN  CD  R  QV+ + NP+++  LDYFVYSVCE+CCDC+  GA   Q+  R   N+L + +RGNCPAHA YD+C VLPNIR+    G      W   C  +  W  S AS+N+ T     +   I +FL      N CG    W  CV +E  Q  +
Sbjct:    9 REDL-PCHMDKQSLNS--MCRQVRLPRELCSKCTLRLVKE-NGGFKDCKSIYNLDAPGCKAKLQRYVDINP-CDGKRASQVKAW-NPTSKMQLDYFVYSVCEQCCDCIYKGATPGQFQRRKNENRLFHPERGNCPAHAVYDICKVLPNIRYMALGGAPFKEGWENTCKDLRMWLRSEASKNFSTNHNAKMSGNIKKFLRSVNVANQCGSETVWTRCVRMERKQMHI 228          
BLAST of Gchil9060.t1 vs. uniprot
Match: R7QE68_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QE68_CHOCR)

HSP 1 Score: 162 bits (410), Expect = 1.020e-46
Identity = 78/180 (43.33%), Postives = 104/180 (57.78%), Query Frame = 0
Query:   69 IFDLDNPDCQAKLKRYAAINAHCDPIRLRQVQDFSNPSNRRGLDYFVYSVCEECCDCVPIGARQNQYVWRAQNNQLLNSKRGNCPAHAFYDLCAVLPNIRFSKTPGGQDHWD----WPKICPLITKWQFSPASRNWLTKSYVNVDWRISRFLIWFFWDNHCGYWQTWRNCVALEHAQKRV 244
            I+D  NP C+  L+RYA++N  CD  R R V+DFSN  N   LDYF+YSVCE+CCDC+P G +  ++  R     L+   R NCPAHA YD+C V PNIR  ++P  +   D    WPKICP+I KW  SP  +N   K  +N    +++FL  +     C     W  C ALE +Q R+
Sbjct:    3 IYDTSNPQCRQALRRYASLNP-CDVQRNRHVRDFSNSQNLIALDYFIYSVCEQCCDCIPRGTKPGEFAKRKAAGTLIKVDRANCPAHARYDVCKVWPNIRHLRSPWERLPRDLNTLWPKICPIIFKWADSPDGQNLYNKDQINQPASMTQFLTRYVKVAFCSKKAFWNECTALEKSQLRI 181          
BLAST of Gchil9060.t1 vs. uniprot
Match: A0A2V3IEV2_9FLOR (Desert hedgehog protein A n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEV2_9FLOR)

HSP 1 Score: 164 bits (414), Expect = 7.480e-43
Identity = 89/228 (39.04%), Postives = 110/228 (48.25%), Query Frame = 0
Query:   24 PCHGVKSTYGKGVTCEKVEFPVGMCSACKLKPFNPFTGSFYNCAAIFDLDNPDCQAKLKRYAAINAHCDPIRLRQVQDFS--NPSNRRGLDYFVYSVCEECCDCVPIGARQNQY-----VWRAQNNQLLNSKRGNCPAHAFYDLCAVLPNIRFSKTPGGQDHWDWPKICPLITKWQFSPASRNWLTKSYVNVDWRISRFLIWFFWDNHCGYWQTWRNCVALEHAQKRV 244
            PCH  KS     VTC  V  P   CS C LKP     G F  C  IF L+ P CQ  L+ Y  +N +CDP+R + +  +   + S    LDYF+YSVCE CCDCVP+G     Y         QN  L  + RGNCPAHA YDLC VLP+++    PG  D    P  CP +  W  S  S NW T    ++D  +  FL        C     WR C  +E  Q  +
Sbjct:  162 PCHPTKSRKQTEVTCSTVRIPPAFCSRCALKPVTS-NGQFARCDDIFQLETPSCQLALEEYVDLNRNCDPVREQALNAWKAGDASAATQLDYFMYSVCELCCDCVPMGITAADYPALKAAHSEQNPTLWAADRGNCPAHAQYDLCNVLPSVQAFVKPGEPDKV-MPPACPPLNAWLNSARSTNWQTNPDASIDGSVRIFLNDALQALECEREDVWRTCFHMEDLQNHI 387          
BLAST of Gchil9060.t1 vs. uniprot
Match: A0A2V3IVT7_9FLOR (Protein qua-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVT7_9FLOR)

HSP 1 Score: 153 bits (387), Expect = 6.760e-40
Identity = 88/250 (35.20%), Postives = 124/250 (49.60%), Query Frame = 0
Query:    6 AALVAALGVC---ALGRSDLNPCHGVKSTYGKGVTCEKVEFPVGMCSACKLKPFNPFTGSFYNCAAIFDLDNPDCQAKLKRYAAINAHCDPIR---LRQVQDFSNPSNRRGLDYFVYSVCEECCDCVPIGARQNQYVW-----RAQNNQLLNSKRGNCPAHAFYDLCAVLPNIRFSKTPGGQDHWDWPKICPLITKWQFSPASRNWLTKSYVNVDWRISRFLIWFFWDNHCGYWQTWRNCVALEHAQKRV 244
            A +VA L V    AL      PCH  K++    V C  V+ P  +C  C L+P     GSF  C  I+D  +P C + ++ Y   N  CD  R   L +++   +   R  +DYF+YSVCE+CCDCVP+G +Q  +        A +  L ++ RGNCPAHA YD+C VLP+I        +       ICP + KW  +PA+ +W T   V +   I +FL       HCG  Q W +C  +E  Q  +
Sbjct:    5 AVVVAVLCVSLFHALHAKSFFPCHSTKASVHNDVKCTSVKLPPRLCGLCPLRPTLQ-DGSFDVCDRIYDTTSPACMSAMRTYVNDN-ECDARRREALDRLEKNGDEDARSEIDYFLYSVCEQCCDCVPMGVKQGDFAQLSKAHSASSPTLWSATRGNCPAHARYDVCKVLPSIATFTADKSKTK----PICPSLNKWINTPAAEDWQTNPEVTLAADIEQFLNGMLVATHCGDAQIWNSCQQMEFKQHHL 248          
BLAST of Gchil9060.t1 vs. uniprot
Match: R7QFW8_CHOCR (HintN domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QFW8_CHOCR)

HSP 1 Score: 117 bits (292), Expect = 9.160e-27
Identity = 55/139 (39.57%), Postives = 75/139 (53.96%), Query Frame = 0
Query:  111 LDYFVYSVCEECCDCVPIGARQNQYVWRAQNNQ-----LLNSKRGNCPAHAFYDLCAVLPNIRFSKTPGGQDHWDWPKICPLITKWQFSPASRNWLTKSYVNVDWRISRFLIWFFWDNHCGYWQTWRNCVALEHAQKRV 244
            LDYF+YSVCE+CCDC+P+G R+  Y   A  +      L    RGNCPAHA +D+C VLPN+R+   PG  +    PKICP + +WQ SP + +W      N++  + RFL        C     W  C  +E  Q  +
Sbjct:    3 LDYFLYSVCEQCCDCIPMGTRRRDYDALASAHSPADPTLWKEDRGNCPAHAQFDVCKVLPNVRYFAKPGDPELVA-PKICPKLREWQKSPEAADWPVNPETNIESDVRRFLNGILVATDCDNKLIWGRCYEMEDKQSNL 140          
BLAST of Gchil9060.t1 vs. uniprot
Match: A0A7S3ZCA3_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3ZCA3_9EUKA)

HSP 1 Score: 100 bits (248), Expect = 2.200e-20
Identity = 62/199 (31.16%), Postives = 96/199 (48.24%), Query Frame = 0
Query:   61 GSFYNCAAIFDLDNPDCQAKLKRYAAINAHCDPIRLRQVQDFSNPSNR-------RGLDYFVYSVCEECCDCVPIGARQNQYVWRAQNNQLLNSKRGNCPAHAFYDLCAVLPNIRF---SKTPGGQDHWDWPKICPLITKWQFSPASRNWLTKSYVNV----DWRISRFLIWFFWDN-HCGYWQTWRNCVALEHAQKRV 244
            G F +CAA+FD+    C A+L++Y   N  CD  R   +    N  N         GLD+FVY++CE CCDC+P G  ++       ++   N  RGNC AH  +D C++ PN+ +   +K P          +CP +  ++  P  RN+L + Y +      +RI    +   W+  HC     ++ C  LE AQ R+
Sbjct:   48 GEFKDCAAMFDVATDGCLAELQKYVDDNV-CDDKRRDFLSIVKNGPNHPNYATAVEGLDFFVYAMCEACCDCIPFGGHRD-------DSSQYNIHRGNCYAHPRFDTCSLFPNLTWIGPNKPPNAAP------VCPALEDFEAGPG-RNFLLQEYQHEFEEPRYRIIPPFLESMWNGLHCSAVGAYQQCFDLECAQNRI 231          
The following BLAST results are available for this feature:
BLAST of Gchil9060.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A2V3IJW6_9FLOR2.080e-12465.31Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IQT2_9FLOR2.540e-8553.44Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QF16_CHOCR3.580e-6542.74Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IMM0_9FLOR1.220e-5844.13Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ID26_9FLOR3.180e-5141.15Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QE68_CHOCR1.020e-4643.33Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IEV2_9FLOR7.480e-4339.04Desert hedgehog protein A n=1 Tax=Gracilariopsis c... [more]
A0A2V3IVT7_9FLOR6.760e-4035.20Protein qua-1 n=1 Tax=Gracilariopsis chorda TaxID=... [more]
R7QFW8_CHOCR9.160e-2739.57HintN domain-containing protein n=1 Tax=Chondrus c... [more]
A0A7S3ZCA3_9EUKA2.200e-2031.16Hypothetical protein (Fragment) n=1 Tax=Lotharella... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..244
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004370_piloncontigtig00004370_pilon:1258426..1259160 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil9060.t1Gchil9060.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004370_pilon 1258426..1259160 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil9060.t1 ID=Gchil9060.t1|Name=Gchil9060.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=245bp
MRFVWAALVAALGVCALGRSDLNPCHGVKSTYGKGVTCEKVEFPVGMCSA
CKLKPFNPFTGSFYNCAAIFDLDNPDCQAKLKRYAAINAHCDPIRLRQVQ
DFSNPSNRRGLDYFVYSVCEECCDCVPIGARQNQYVWRAQNNQLLNSKRG
NCPAHAFYDLCAVLPNIRFSKTPGGQDHWDWPKICPLITKWQFSPASRNW
LTKSYVNVDWRISRFLIWFFWDNHCGYWQTWRNCVALEHAQKRV*
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