Gchil8969.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil8969.t1
Unique NameGchil8969.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length158
Homology
BLAST of Gchil8969.t1 vs. uniprot
Match: A0A2V3ICD6_9FLOR (Protein HHL1, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ICD6_9FLOR)

HSP 1 Score: 246 bits (627), Expect = 1.300e-80
Identity = 119/152 (78.29%), Postives = 134/152 (88.16%), Query Frame = 0
Query:    1 MRKGPRFGQPVQQSRRPESTPSLPEDGTPVFTVFVRSQRAKLWYPLGAVKGDNRSKSLVDALKGGFAKGMYENALDKGIAQTVYGKDKDRFLQNALRMYPQLKKSQNSLEFGYKVAAKDLEEKPIKFVGPDMALPFTAWAKKRIESALKSLS 152
            MRKGPR  QP+QQ R+P + PSLPEDGTPVF +FVRSQRAKLWYPLGAV+GD RSK+LV+ALKGGF +GMYENALDKGIAQT+YGKD DRF+QNALRMYPQLKKSQN LEFGYKVAAK L+E+ IK V  DMALPF AWAKK++E+A KS S
Sbjct:   53 MRKGPRSRQPLQQPRQPGAAPSLPEDGTPVFAIFVRSQRAKLWYPLGAVQGDERSKTLVNALKGGFGRGMYENALDKGIAQTIYGKDSDRFMQNALRMYPQLKKSQNMLEFGYKVAAKGLDERQIKLVSQDMALPFAAWAKKKVENAFKSFS 204          
BLAST of Gchil8969.t1 vs. uniprot
Match: A0A7S0T7K4_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T7K4_9RHOD)

HSP 1 Score: 153 bits (387), Expect = 1.720e-44
Identity = 72/142 (50.70%), Postives = 98/142 (69.01%), Query Frame = 0
Query:    3 KGPRFGQPVQQSRRPESTPSLPEDGTPVFTVFVRSQRAKLWYPLGAVKGDNRSKSLVDALKGGFAKGMYENALDKGIAQTVYGKDKDRFLQNALRMYPQLKKSQNSLEFGYKVAAKDLEEKPIKFVGPDMALPFTAWAKKRI 144
            KG R   P  Q +  +  P LPEDGTPVF +F R+QRAKLWYP+G V GD +SK+LV A+K G+ + +Y  ALDKGIAQ V+G D  +FL+N ++ +PQLKK +N LEFGYKV + ++ + P   +  + ALPF  WAK ++
Sbjct:   42 KGARMRSPQGQGQAGQGMPPLPEDGTPVFAIFARTQRAKLWYPVGMVGGDGKSKTLVGAMKTGWGRRLYRGALDKGIAQVVFGPDSAKFLENGMKQFPQLKKYRNELEFGYKVLSTEITDWPTTKIEKEQALPFFEWAKLKL 183          
BLAST of Gchil8969.t1 vs. uniprot
Match: R7QNR7_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QNR7_CHOCR)

HSP 1 Score: 154 bits (390), Expect = 3.720e-44
Identity = 81/149 (54.36%), Postives = 103/149 (69.13%), Query Frame = 0
Query:    1 MRKGPRFGQPVQQSRRPESTPSLPEDGTPVFTVFVRSQRAKLWYPLGAVKGDNRSKSLVDALKGGFAKGMYENALDKGIAQTVYGKDKDRFLQNALRMYPQLKKSQNSLEFGYKVAAKDLEEKPIKFVGPDMALPFTAWAKKRIESALK 149
            M+KG R  QP+Q  RR +   SLPEDGTPVF +FVR+ R KLWYP+GAV+GD+RSK+LV+ALKGGFAK MY                  +F+Q+A+RMYPQLKK    LEFGY+V A  L+E+P K V  +MALPF  WAKK++++  K
Sbjct:  100 MKKG-RSRQPLQP-RRAQDQMSLPEDGTPVFAIFVRTPRTKLWYPMGAVQGDDRSKNLVNALKGGFAKAMYAXXXXXXXXXXXXXXXXXKFVQSAVRMYPQLKKYTKQLEFGYRVTAIGLDEQPTKLVTKEMALPFVEWAKKQLDNVFK 246          
BLAST of Gchil8969.t1 vs. uniprot
Match: A0A1X6NSY5_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NSY5_PORUM)

HSP 1 Score: 152 bits (383), Expect = 1.490e-43
Identity = 73/145 (50.34%), Postives = 104/145 (71.72%), Query Frame = 0
Query:    6 RFGQPVQ-QSRRPESTPSLPEDGTPVFTVFVRSQRAKLWYPLGAVKGDNRSKSLVDALKGGFAKGMYENALDKGIAQTVYGKDKDRFLQNALRMYPQLKKSQNSLEFGYKVAAKDLEEKPIKFVGPDMALPFTAWAKKRIESALK 149
            R  QP++ Q + P   P  PEDGTP+F+VFVRS+R KLWYP+GAV+GD R+K+LV +++  + K +Y+ AL+KG+AQT++  D ++F   ALR YPQLKKS+  L+FGYKV AKD+ + P + +  DM LPF  + KKR+   L+
Sbjct:   64 RLQQPLRPQGQSPRGPPPPPEDGTPIFSVFVRSRRTKLWYPVGAVRGDGRAKALVQSMRTSWGKKLYQGALNKGMAQTIFSGDGNKFTDQALRQYPQLKKSKADLQFGYKVTAKDINDWPTQVLTRDMRLPFFEYWKKRLSGELE 208          
BLAST of Gchil8969.t1 vs. uniprot
Match: A0A5J4Z721_PORPP (Protein HHL1, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z721_PORPP)

HSP 1 Score: 142 bits (358), Expect = 8.140e-40
Identity = 64/124 (51.61%), Postives = 89/124 (71.77%), Query Frame = 0
Query:   21 PSLPEDGTPVFTVFVRSQRAKLWYPLGAVKGDNRSKSLVDALKGGFAKGMYENALDKGIAQTVYGKDKDRFLQNALRMYPQLKKSQNSLEFGYKVAAKDLEEKPIKFVGPDMALPFTAWAKKRI 144
            P LP+DGTPVF +F R+QRAK+WYP+G V GD  SK+LV+A+K  +++ +Y+ ALDKGIAQ V+G D  +FL  A+  YPQL K ++ LEFGYKV + ++ + P   V P+ ALPF  W K ++
Sbjct:   80 PELPKDGTPVFAIFARTQRAKIWYPVGMVGGDRNSKTLVNAMKANWSRKLYQGALDKGIAQVVFGPDSRKFLAGAMNKYPQLSKYRDELEFGYKVISTEIRDWPTTIVTPEAALPFFEWVKYKL 203          
BLAST of Gchil8969.t1 vs. uniprot
Match: A0A6T6MJ05_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A6T6MJ05_9RHOD)

HSP 1 Score: 139 bits (350), Expect = 3.170e-39
Identity = 72/159 (45.28%), Postives = 105/159 (66.04%), Query Frame = 0
Query:    1 MRKGPRFGQPVQQSRRPEST-PSLPEDGTPVFTVFVRSQR-AKLWYPLGAVKGDNRSKSLVDALKGGFAKGMYENALDKGIAQTVYGKDKDRFLQNALRMYPQLKKSQNSLEFGYKVAAKDLEEKPIKFVGPDMALPFTAWAKKRIESALKSLSSTGEK 157
            M KG   G+     R+P    P +P+DGTPVFT+ VRS + AKLWYP GAV+GD R+K LV+ ++  + K +Y +ALD+GIA TVY KD  RF +NA+RM+P L+ S N+L+FGY+++A  +E    K +  +M +PF  W + ++ S  + L  TG+K
Sbjct:    1 MGKGKGSGRRNAPLRKPNQVGPEIPDDGTPVFTILVRSDKGAKLWYPCGAVQGDKRAKGLVEGMQSSWGKALYGSALDRGIAGTVY-KDGSRFAENAVRMFPALRSSMNNLQFGYRISAAGMETTKTKLITEEMGMPFLKWIQYKVSSQFEEL--TGQK 156          
BLAST of Gchil8969.t1 vs. uniprot
Match: A0A7S1ERZ3_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ERZ3_9RHOD)

HSP 1 Score: 112 bits (281), Expect = 2.030e-29
Identity = 55/107 (51.40%), Postives = 72/107 (67.29%), Query Frame = 0
Query:    1 MRKGPRFGQPVQQSRRPESTPSLPEDGTPVFTVFVRSQRAKLWYPLGAVKGDNRSKSLVDALKGGFAKGMYENALDKGIAQTVYGKDKDRFLQNALRMYPQLKKSQN 107
            M KG     P Q     +   SLPEDGTPVF +F R+QRAK+WYP+G V GD +SK+LV A+K  + + +Y  ALDKGIAQ V+G D  +FL N L+ +PQLK+ +N
Sbjct:    3 MGKGKARYSPGQSPPPQQQGMSLPEDGTPVFAIFARTQRAKIWYPIGMVGGDGKSKTLVSAMKTSWGRTLYRGALDKGIAQVVFGPDAGKFLNNGLKQFPQLKRYRN 109          
BLAST of Gchil8969.t1 vs. uniprot
Match: L1IIK2_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IIK2_GUITC)

HSP 1 Score: 109 bits (272), Expect = 1.420e-27
Identity = 54/100 (54.00%), Postives = 75/100 (75.00%), Query Frame = 0
Query:   26 DGTPVFTVFVRSQRAKLWYPLGAVKGDNRSKSLVDALKGG--FAKGMYENALDKGIAQTVYGKDKDRFLQNALRMYPQLKKSQNSLEFGYKVAAKDLEEK 123
            DG PVF VFVRS+RA +WYP G +KGD RSKSLV+A +    F K  Y++ LDKG+A++++ + KD+F+++ ++MYPQLK S+  LEFGY+V    LEEK
Sbjct:   34 DGLPVFNVFVRSKRAGIWYPAGTLKGDARSKSLVEAWRDNSLFLKDQYKSTLDKGMAKSLF-ESKDKFVESVIKMYPQLKNSRGELEFGYRVRIPGLEEK 132          
BLAST of Gchil8969.t1 vs. uniprot
Match: A0A836CMT2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMT2_9STRA)

HSP 1 Score: 105 bits (263), Expect = 1.810e-25
Identity = 50/95 (52.63%), Postives = 66/95 (69.47%), Query Frame = 0
Query:   29 PVFTVFVRSQRAKLWYPLGAVKGDNRSKSLVDALKGGFAKGMYENALDKGIAQTVYGKDKDRFLQNALRMYPQLKKSQNSLEFGYKVAAKDLEEK 123
            PVF +F R++RA +WYP GA+ GD RSK+ VDAL  GF   +Y NAL+KG+A++V G  K +   +  RMYPQL K  ++LEFG+KV    LEEK
Sbjct:   93 PVFEIFCRTKRANMWYPCGALGGDERSKATVDALSNGFLSDLYRNALEKGVAESVLGPQKSQLKGSITRMYPQLAKEASNLEFGFKVKYAPLEEK 187          
BLAST of Gchil8969.t1 vs. uniprot
Match: A0A7S2EM79_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EM79_TRICV)

HSP 1 Score: 94.0 bits (232), Expect = 8.200e-22
Identity = 49/110 (44.55%), Postives = 75/110 (68.18%), Query Frame = 0
Query:   25 EDGTPVFTVFVRSQRAKLWYPLGAVKGDNRSKSLVDALKG-GFAKGMYENALDKGIAQTVYGKDKDRFLQNALRMYPQLKKSQNSLEFGYKVAAKDL--EEKPIKFVGPD 131
            EDG P+F +FVRS+ A++WYP G+ KGD+RS +L    +  G   G+ +N LD G++ ++Y +D ++ +   +R YPQLKKS++ LEFGYK+A + L  E+K I  V P+
Sbjct:    5 EDGLPIFNLFVRSKVAEVWYPCGSFKGDDRSAALASNYRDQGLLAGLSKNQLDSGVSGSLY-RDMNKLVDTVVRGYPQLKKSRDDLEFGYKLAYEGLGEEQKKITVVKPE 113          
The following BLAST results are available for this feature:
BLAST of Gchil8969.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
A0A2V3ICD6_9FLOR1.300e-8078.29Protein HHL1, chloroplastic n=1 Tax=Gracilariopsis... [more]
A0A7S0T7K4_9RHOD1.720e-4450.70Hypothetical protein n=1 Tax=Erythrolobus madagasc... [more]
R7QNR7_CHOCR3.720e-4454.36Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1X6NSY5_PORUM1.490e-4350.34Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A5J4Z721_PORPP8.140e-4051.61Protein HHL1, chloroplastic n=1 Tax=Porphyridium p... [more]
A0A6T6MJ05_9RHOD3.170e-3945.28Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S1ERZ3_9RHOD2.030e-2951.40Hypothetical protein (Fragment) n=1 Tax=Timspurcki... [more]
L1IIK2_GUITC1.420e-2754.00Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
A0A836CMT2_9STRA1.810e-2552.63Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2EM79_TRICV8.200e-2244.55Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR045388Protein HHL1-likePFAMPF20133DUF6523coord: 1..153
e-value: 7.0E-35
score: 119.9
IPR045388Protein HHL1-likePANTHERPTHR48191PROTEIN HHL1 CHLOROPLASTICcoord: 10..120
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..28

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004370_piloncontigtig00004370_pilon:512295..512768 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil8969.t1Gchil8969.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004370_pilon 512295..512768 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil8969.t1 ID=Gchil8969.t1|Name=Gchil8969.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=158bp
MRKGPRFGQPVQQSRRPESTPSLPEDGTPVFTVFVRSQRAKLWYPLGAVK
GDNRSKSLVDALKGGFAKGMYENALDKGIAQTVYGKDKDRFLQNALRMYP
QLKKSQNSLEFGYKVAAKDLEEKPIKFVGPDMALPFTAWAKKRIESALKS
LSSTGEK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR045388HHL1-like