Gchil7415.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7415.t1
Unique NameGchil7415.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length382
Homology
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BLAST of Gchil7415.t1 vs. uniprot
Match: A0A2V3ICV1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ICV1_9FLOR)

HSP 1 Score: 396 bits (1017), Expect = 4.660e-134
Identity = 184/297 (61.95%), Postives = 229/297 (77.10%), Query Frame = 0 
Query:   77 KLNPKELKWSEIPFESVQEELDAIDEYEREEGLEENAVWPKFLRGAAYEHWGLPQLALAQYAKVPQGTELSKVPQLWERKAYNSFKIGKVNEANAYCDIALTIYGQSVGNELHFAHWFHAKFQDFLPKWNGPHATVQRGICKYCAGMDKGARESLVTQIALEGSDLEHAILWFLAASVRMSSDGVAPEWDLRMVRKALQADYEWDPRLRILIDLYMAHATGMFGDVAEVEQKLSEEIKMDECDDIVSKVYVALYHDAFTKDYAERDRVLEEVLALGCSKNQHDTENFLFFAVKNRFS 373
            KL P +L W+EIPF S+QEELDAIDEYEREE L+  + WPKFLRGAAYE+WG P LALAQYA +  GT L KVP+LWERKAYN FKIG V +A+A+ DIA+ +Y  SVGNELHF HWF+  F+D++PKWNGP A VQRGICKYC GM K ARES V QI ++   +EHA+LWFLAAS +  +D    E DL++V   +   ++W+PRLR+ IDLY+A+A G+FG VAE+E++LS  +K D  DDIV+KVY+ALYHDAFTKD +ERDR L+E+ A+G +  Q+DTENFLF    NRFS
Sbjct:   42 KLTPNKLTWAEIPFSSLQEELDAIDEYEREEDLDRGSSWPKFLRGAAYEYWGQPNLALAQYATIEAGTNLLKVPELWERKAYNCFKIGNVMQASAFFDIAINLYNLSVGNELHFVHWFYRHFKDYVPKWNGPPAPVQRGICKYCMGMSKIARESFVAQIVMKKEGMEHALLWFLAASYKSHTDEAVLECDLKIVHSTISEQFDWNPRLRLFIDLYLAYANGVFGRVAELEEELSNAVKKDGSDDIVTKVYIALYHDAFTKDESERDRALDELSAVGTTSKQNDTENFLFHTAVNRFS 338
The following BLAST results are available for this feature:
BLAST of Gchil7415.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3ICV1_9FLOR4.660e-13461.95Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 28..32
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 16..27
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 33..381
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..32
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..15
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..27
score: 5.0
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 98..244

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000007_piloncontigtig00000007_pilon:1114716..1115861 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7415.t1Gchil7415.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000007_pilon 1114716..1115861 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7415.t1 ID=Gchil7415.t1|Name=Gchil7415.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=382bp
MRVSSAFASPVPSSKLLVTSVYAASSCPWVAALSQRSVRPFPRRRRVTYF
ELNAADELPSDESAIEEQTDHQELARKLNPKELKWSEIPFESVQEELDAI
DEYEREEGLEENAVWPKFLRGAAYEHWGLPQLALAQYAKVPQGTELSKVP
QLWERKAYNSFKIGKVNEANAYCDIALTIYGQSVGNELHFAHWFHAKFQD
FLPKWNGPHATVQRGICKYCAGMDKGARESLVTQIALEGSDLEHAILWFL
AASVRMSSDGVAPEWDLRMVRKALQADYEWDPRLRILIDLYMAHATGMFG
DVAEVEQKLSEEIKMDECDDIVSKVYVALYHDAFTKDYAERDRVLEEVLA
LGCSKNQHDTENFLFFAVKNRFSLIVSNGSK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf