Gchil7546.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7546.t1
Unique NameGchil7546.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length659
Homology
BLAST of Gchil7546.t1 vs. uniprot
Match: A0A2V3ITB9_9FLOR (Myocyte-specific enhancer factor 2D-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITB9_9FLOR)

HSP 1 Score: 265 bits (678), Expect = 2.920e-76
Identity = 247/668 (36.98%), Postives = 313/668 (46.86%), Query Frame = 0
Query:    1 MDSGSNNTLSTSSRPPAPHKRGKIQIRRITDNRTRQVTFLKRKNGLLKKAMELGVLCDCEVAVIVYNPHNGKLFEYSSISMERVLNRYATYSGPSERRKPEQFFDVGAAKGHSNIPVNEPNVAIAAQNASLAASNRQRPTYKFEEEQDGMGIAKKRKLASGETPTFVFSGEGIPIPHLVNQPVSTAVPKMDSEASRQNMGLRNPTHTVPLTQIV--QVPHPLPVLPIQYPVDGYGHVSDSAHRMTSTTEPSHPISHTMSHLDYMPQAQNEDRFIQLGPNVENKRLRQTSRAPPISTHVPLTYATGHPPSQVYQRMFEEPVTNAPPPAAGSGPPKHEMMHPEPQNRPGEEHILNYREEEGYAAARDWPYQGHGTVAEGNRERDEHCSNQTSLGIPTSRAGTADVPHSEALPQHPQEKQGVEIXXXXXXXXXXXXXXXXXXXXXXKNGGDFSEVPDGTNLKKTLQQPEKNEYSNKENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPPPKLGLRRDG--ALPGPSS---------EGGAHITPSLSAP-----------LIPTLSEALGSIPRLQIPATPNGQP-WALSSLSNDGGNSVSLTPFFNLDSTSARGRARNPFAPSPGS--GVVPLTPRFFGLE-QSSTRSLFRNTDTTPFAPGMS 640
            M+    N   +SS PP    R KI+I+RI DNR+RQVTFLKRKNGLLKKAMELG+LCDCE+AVIVYN HNGKLFEYSSI M++VLNRYATYSGPSERRK + FFD+ AAKG+SNIPVNEPNVA AA+NA+LAAS R RPTYKF+E  D       RKL+SGETP  +        PH + +    A  K+ +   + N+  +      P T      +P   P  P++  +     V+D+     S  +     +   S  +Y P   N + F Q     +N       R PP S      + T     Q + R  E P+                  HP   +     H+  Y      + A+   Y  H + ++   +      N T L    +              QH  EK     XXXXXXXXXXXXXXXX          D   + D +   +   QP   E S   N                                         G R DG  AL   SS         EG A    +  A             +PT+S+AL ++P L    TP+GQ  W  S  S DG N++ LTPFFN+DS S RGR+ NPFA S     G +PLTPRFFG++   STRSL +    TP + G S
Sbjct:    1 MNPDKENYHPSSSIPPTQDGRRKIRIQRIQDNRSRQVTFLKRKNGLLKKAMELGILCDCEIAVIVYNVHNGKLFEYSSIDMDKVLNRYATYSGPSERRKKDSFFDLQAAKGYSNIPVNEPNVANAARNAALAASRRPRPTYKFQEPDDK---PHGRKLSSGETPVVMVHTPHTQ-PHALQE--QHAAKKVKTNYGQINIAPK------PCTPAFANHLPTLHPATPVESAIHQQSAVNDARRVYISQLQQIPLATPAPSFTNYDPIQANNNPFSQHCARKDN-----ALRIPPGSN-----WQTPRSTGQQHFRPSETPI------------------HPHYSS-----HMNAYANPNNQSQAQAGDYSSHASASQIQSDWSRAHRNDTYLSSTPTTTNQ----------QHRSEKAXXXXXXXXXXXXXXXXXXXXFAHETTDIQQD-RHINDNSANSRGFHQPT--EPSLAPNPAHNLVASHNDSGIETGAKAKLGLPHRDLGEQTNQEYRADCGRREDGIRALLNSSSSPHAESECREGTAQHASAAGAAGQLQSENGQQSAMPTISQALRTVPPLHFATTPHGQATWPNSLPSADGENAIPLTPFFNMDSFSTRGRSVNPFAMSSSKNMGFLPLTPRFFGMDPMQSTRSLSQPRALTPASGGES 610          
BLAST of Gchil7546.t1 vs. uniprot
Match: A0A2V3J9R8_9FLOR (Myocyte-specific enhancer factor 2D n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J9R8_9FLOR)

HSP 1 Score: 217 bits (553), Expect = 2.000e-58
Identity = 111/163 (68.10%), Postives = 127/163 (77.91%), Query Frame = 0
Query:    1 MDSGSNNTLSTSSRPPAPHKRGKIQIRRITDNRTRQVTFLKRKNGLLKKAMELGVLCDCEVAVIVYNPHNGKLFEYSSISMERVLNRYATYSGPSERRKPEQFFDVGAAKGHSNIPVNEPNVAIAAQNASLAASNRQRPTYKFEEEQDGMGIAKKRKLASGET 163
            M+    N    SS P A   R KI+I+RI DNR+RQ TFLKRKNGL KKAMELGVLCDCE+ VIVYN HNGKLFEYSS+ M++VLNRYA+YSGPSERRK E FFD+ AAKG+SNIP NEPNVA AA+NA+LAAS R RP+YKFEEE +       RKL+ GET
Sbjct:    1 MNHNDENQTPNSSTPVA---RRKIKIQRIEDNRSRQATFLKRKNGLFKKAMELGVLCDCEIGVIVYNVHNGKLFEYSSVDMDQVLNRYASYSGPSERRKRENFFDLSAAKGYSNIPQNEPNVAQAARNAALAASRRPRPSYKFEEETNAQPQGSNRKLSYGET 160          
BLAST of Gchil7546.t1 vs. uniprot
Match: A0A2V3J2L1_9FLOR (Myocyte-specific enhancer factor 2D n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2L1_9FLOR)

HSP 1 Score: 148 bits (373), Expect = 2.180e-35
Identity = 83/173 (47.98%), Postives = 108/173 (62.43%), Query Frame = 0
Query:    8 TLSTSSRPPAP-----HKRGKIQIRRITDNRTRQVTFLKRKNGLLKKAMELGVLCDCEVAVIVYNPHNGKLFEYSSISMERVLNRYATYSGPSERRKPEQFFDVGAAKGHSNIPVNEPNVAIAAQNASLAASNRQRPTYKFEEEQDG---MGIAKKRKLASGETPTFVFSGEG 172
            T   SSR  +P       R +  I  I +   ++VTF KRK+GLLKKA ELGVLCDCE+ VI++NP +G LFEY S+ ME +L RYA+Y GPS R + E F D  AAKG SNIPV EP +A  A+NA++AAS+R RP  KF+ +  G     + +K     GE+   V S +G
Sbjct:    3 TTKESSRQSSPVLVNRGGRKRKAIEPIQNRNKQRVTFSKRKDGLLKKAYELGVLCDCEIGVIIFNPLSGNLFEYCSVQMENLLQRYASYKGPSMRMEKETFCDRSAAKGVSNIPVEEPELAQKARNAAIAASHRPRPILKFQRQSFGHTKCRMVRKSDQMRGESLATVGSSKG 175          
BLAST of Gchil7546.t1 vs. uniprot
Match: A0A1X6PC13_PORUM (MADS-box domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PC13_PORUM)

HSP 1 Score: 119 bits (299), Expect = 2.430e-24
Identity = 64/116 (55.17%), Postives = 78/116 (67.24%), Query Frame = 0
Query:   21 RGKIQIRRITDNRTRQVTFLKRKNGLLKKAMELGVLCDCEVAVIVYNPHNGKLFEYSSISMERVLNRYATYSGPSERRKPEQFFDVGAAKGHSNIPVNEPNVAIAAQNASLAASNR 136
            R KI IR I D R RQVTF KRKNGLLKKAMEL VLC C+++V+V+N    KLFEY +  M++V  RYA YSGP+ERR  + F +  AAK   N+P N   +  AA  A +AAS R
Sbjct:   59 RKKILIRHIPDERNRQVTFTKRKNGLLKKAMELSVLCGCDISVVVFNG-KSKLFEYCNTDMDKVFLRYANYSGPAERRNLKNFHNPAAAKVAINVPKNHAALRDAALAAGVAASRR 173          
BLAST of Gchil7546.t1 vs. uniprot
Match: A0A6T6BQ46_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A6T6BQ46_9RHOD)

HSP 1 Score: 115 bits (287), Expect = 1.970e-23
Identity = 61/112 (54.46%), Postives = 77/112 (68.75%), Query Frame = 0
Query:   21 RGKIQIRRITDNRTRQVTFLKRKNGLLKKAMELGVLCDCEVAVIVYNPHNGKLFEYSSISMERVLNRYATYSGPSERRKPEQFFDVGAAKGHSNIPVNEPNVAIAAQNASLA 132
            R KI+I RI D R RQVTF KRKNGLLKKAMEL VLCDC++ V+++N  +GKL+EY+S  +  +L RYATYSGP E R+ E F      + H N+P + P +A A Q A  A
Sbjct:    9 RKKIKIARIEDERNRQVTFTKRKNGLLKKAMELAVLCDCDIGVVIFNS-SGKLYEYTSGDLAGLLARYATYSGPVEHRETEMFHRP-TVQSHVNVPKDRPALAEAVQCAYRA 118          
BLAST of Gchil7546.t1 vs. uniprot
Match: Q05BX2_HUMAN (MEF2D protein n=41 Tax=Theria TaxID=32525 RepID=Q05BX2_HUMAN)

HSP 1 Score: 106 bits (264), Expect = 2.610e-23
Identity = 58/130 (44.62%), Postives = 80/130 (61.54%), Query Frame = 0
Query:   21 RGKIQIRRITDNRTRQVTFLKRKNGLLKKAMELGVLCDCEVAVIVYNPHNGKLFEYSSISMERVLNRYATYSGPSERRKPEQFFDVGAAKGHSNIPVNEPNVAIAAQNASLAASNRQRPTYKFEEEQDGM 150
            R KIQI+RITD R RQVTF KRK GL+KKA EL VLCDCE+A+I++N H+ KLF+Y+S  M++VL +Y  Y+ P E R      +    KG +     EP+   + + + L     +R +    EE DG+
Sbjct:    3 RKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFN-HSNKLFQYASTDMDKVLLKYTEYNEPHESRTNADIIETLRKKGFNGCDSPEPDGEDSLEQSPLLEDKYRRAS----EELDGL 127          
BLAST of Gchil7546.t1 vs. uniprot
Match: A0A2V3IQ43_9FLOR (Myocyte-specific enhancer factor 2D n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQ43_9FLOR)

HSP 1 Score: 103 bits (257), Expect = 4.420e-23
Identity = 48/72 (66.67%), Postives = 56/72 (77.78%), Query Frame = 0
Query:   51 MELGVLCDCEVAVIVYNPHNGKLFEYSSISMERVLNRYATYSGPSERRKPEQFFDVGAAKGHSNIPVNEPNV 122
            M+L V CDCE+ VIV N HNGKLFEYSS  ME+ LNRYA+Y+GPSERRK E    + AAKG S+IP +EPNV
Sbjct:    1 MKLAVFCDCEIGVIVCNVHNGKLFEYSSADMEQALNRYASYNGPSERRKREDLSGLSAAKGFSDIPQSEPNV 72          
BLAST of Gchil7546.t1 vs. uniprot
Match: A0A671RLP5_9TELE (Myocyte-specific enhancer factor 2D-like n=4 Tax=Clupeocephala TaxID=186625 RepID=A0A671RLP5_9TELE)

HSP 1 Score: 105 bits (262), Expect = 5.000e-23
Identity = 59/128 (46.09%), Postives = 78/128 (60.94%), Query Frame = 0
Query:   21 RGKIQIRRITDNRTRQVTFLKRKNGLLKKAMELGVLCDCEVAVIVYNPHNGKLFEYSSISMERVLNRYATYSGPSERRKPEQFFDVGAAKGHSNIPVNEPNVAIAAQNASLAASNRQRPTYKFEEEQD 148
            R KIQI+RITD R RQVTF KRK GL+KKA EL VLCDCE+A+I++N H+ KLF+Y+S  M++VL +Y  Y+ P E R      +    KG +     EP+      + S+  S  Q   Y+  EE D
Sbjct:    3 RKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFN-HSNKLFQYASTDMDKVLLKYTEYNEPHESRTNADIIETLRKKGFNGCNSPEPD-----GDDSIDQSPLQEDKYRNSEELD 124          
BLAST of Gchil7546.t1 vs. uniprot
Match: A0A7J8BFQ4_ROUAE (Myocyte enhancer factor 2D n=4 Tax=Boreoeutheria TaxID=1437010 RepID=A0A7J8BFQ4_ROUAE)

HSP 1 Score: 105 bits (263), Expect = 5.010e-23
Identity = 58/130 (44.62%), Postives = 80/130 (61.54%), Query Frame = 0
Query:   21 RGKIQIRRITDNRTRQVTFLKRKNGLLKKAMELGVLCDCEVAVIVYNPHNGKLFEYSSISMERVLNRYATYSGPSERRKPEQFFDVGAAKGHSNIPVNEPNVAIAAQNASLAASNRQRPTYKFEEEQDGM 150
            R KIQI+RITD R RQVTF KRK GL+KKA EL VLCDCE+A+I++N H+ KLF+Y+S  M++VL +Y  Y+ P E R      +    KG +     EP+   + + + L     +R +    EE DG+
Sbjct:    3 RKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFN-HSNKLFQYASTDMDKVLLKYTEYNEPHESRTNADIIETLRKKGFNGCDSPEPDGEDSLEQSPLLEDRCRRAS----EELDGL 127          
BLAST of Gchil7546.t1 vs. uniprot
Match: UPI0005239FBF (myocyte-specific enhancer factor 2D homolog n=1 Tax=Nestor notabilis TaxID=176057 RepID=UPI0005239FBF)

HSP 1 Score: 105 bits (262), Expect = 7.430e-23
Identity = 60/146 (41.10%), Postives = 83/146 (56.85%), Query Frame = 0
Query:   21 RGKIQIRRITDNRTRQVTFLKRKNGLLKKAMELGVLCDCEVAVIVYNPHNGKLFEYSSISMERVLNRYATYSGPSERRKPEQFFDVGAAKGHSNIPVNEPNVAIAAQNASLAASNRQRPTYKFEEEQDGMGIAKKRKLASGETPTF 166
            R KIQI+RITD R RQVTF KRK GL+KKA EL VLCDCE+A+I++N H+ KLF+Y+S  M++VL +Y  Y+ P E R      +    KG +     EP+   +   + L          K+ +  + + I  KR  +S   P F
Sbjct:    3 RKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFN-HSNKLFQYASTDMDKVLLKYTEYNEPHESRTNADIIETLRKKGFNGCDSPEPDGDDSIDQSPLMED-------KYRKGSEDLDILFKRYGSSVPAPNF 140          
The following BLAST results are available for this feature:
BLAST of Gchil7546.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3ITB9_9FLOR2.920e-7636.98Myocyte-specific enhancer factor 2D-like n=1 Tax=G... [more]
A0A2V3J9R8_9FLOR2.000e-5868.10Myocyte-specific enhancer factor 2D n=1 Tax=Gracil... [more]
A0A2V3J2L1_9FLOR2.180e-3547.98Myocyte-specific enhancer factor 2D n=1 Tax=Gracil... [more]
A0A1X6PC13_PORUM2.430e-2455.17MADS-box domain-containing protein n=1 Tax=Porphyr... [more]
A0A6T6BQ46_9RHOD1.970e-2354.46Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
Q05BX2_HUMAN2.610e-2344.62MEF2D protein n=41 Tax=Theria TaxID=32525 RepID=Q0... [more]
A0A2V3IQ43_9FLOR4.420e-2366.67Myocyte-specific enhancer factor 2D n=1 Tax=Gracil... [more]
A0A671RLP5_9TELE5.000e-2346.09Myocyte-specific enhancer factor 2D-like n=4 Tax=C... [more]
A0A7J8BFQ4_ROUAE5.010e-2344.62Myocyte enhancer factor 2D n=4 Tax=Boreoeutheria T... [more]
UPI0005239FBF7.430e-2341.10myocyte-specific enhancer factor 2D homolog n=1 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 489..509
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 318..343
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 619..658
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..15
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 366..537
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 619..637
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 464..512
NoneNo IPR availablePANTHERPTHR48019:SF90MYOCYTE-SPECIFIC ENHANCER FACTOR 2Ccoord: 21..112
NoneNo IPR availablePANTHERPTHR48019SERUM RESPONSE FACTOR HOMOLOGcoord: 21..112
IPR002100Transcription factor, MADS-boxPRINTSPR00404MADSDOMAINcoord: 56..77
score: 33.98
coord: 21..41
score: 57.17
coord: 41..56
score: 74.11
IPR002100Transcription factor, MADS-boxSMARTSM00432madsneu2coord: 19..79
e-value: 7.5E-27
score: 105.2
IPR002100Transcription factor, MADS-boxPFAMPF00319SRF-TFcoord: 28..76
e-value: 2.5E-22
score: 78.1
IPR002100Transcription factor, MADS-boxPROSITEPS50066MADS_BOX_2coord: 19..80
score: 23.716784
IPR036879Transcription factor, MADS-box superfamilyGENE3D3.40.1810.10coord: 31..110
e-value: 6.6E-27
score: 95.4
IPR036879Transcription factor, MADS-box superfamilySUPERFAMILY55455SRF-likecoord: 21..97
IPR033896MADS MEF2-likeCDDcd00265MADS_MEF2_likecoord: 21..96
e-value: 1.18156E-34
score: 124.202

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000007_piloncontigtig00000007_pilon:1858343..1860581 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7546.t1Gchil7546.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000007_pilon 1858343..1860581 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7546.t1 ID=Gchil7546.t1|Name=Gchil7546.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=659bp
MDSGSNNTLSTSSRPPAPHKRGKIQIRRITDNRTRQVTFLKRKNGLLKKA
MELGVLCDCEVAVIVYNPHNGKLFEYSSISMERVLNRYATYSGPSERRKP
EQFFDVGAAKGHSNIPVNEPNVAIAAQNASLAASNRQRPTYKFEEEQDGM
GIAKKRKLASGETPTFVFSGEGIPIPHLVNQPVSTAVPKMDSEASRQNMG
LRNPTHTVPLTQIVQVPHPLPVLPIQYPVDGYGHVSDSAHRMTSTTEPSH
PISHTMSHLDYMPQAQNEDRFIQLGPNVENKRLRQTSRAPPISTHVPLTY
ATGHPPSQVYQRMFEEPVTNAPPPAAGSGPPKHEMMHPEPQNRPGEEHIL
NYREEEGYAAARDWPYQGHGTVAEGNRERDEHCSNQTSLGIPTSRAGTAD
VPHSEALPQHPQEKQGVEISTSGTEDVEFPRSEAPADHSLAKNGGDFSEV
PDGTNLKKTLQQPEKNEYSNKENERTENSNKENERTENSNKENERTENSN
KENERLENVPPPKLGLRRDGALPGPSSEGGAHITPSLSAPLIPTLSEALG
SIPRLQIPATPNGQPWALSSLSNDGGNSVSLTPFFNLDSTSARGRARNPF
APSPGSGVVPLTPRFFGLEQSSTRSLFRNTDTTPFAPGMSDGEQGGSGEQ
QPGDGKPE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002100TF_MADSbox
IPR036879TF_MADSbox_sf
IPR033896MADS_MEF2-like