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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 9940.ENSOARP00000006399 |
| Preferred name | MEF2D |
| PFAMs | HJURP_C,SRF-TF |
| Max annot lvl | 33208|Metazoa |
| KEGG ko | ko:K09260,ko:K09262 |
| KEGG Pathway | ko04013,ko04022,ko04371,ko05418,map04013,map04022,map04371,map05418 |
| GOs | GO:0000976,GO:0000977,GO:0000978,GO:0000981,GO:0000982,GO:0000987,GO:0001012,GO:0001067,GO:0001077,GO:0001228,GO:0001501,GO:0001503,GO:0001649,GO:0001958,GO:0002062,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0006139,GO:0006351,GO:0006355,GO:0006357,GO:0006366,GO:0006725,GO:0006807,GO:0007275,GO:0007507,GO:0007512,GO:0007517,GO:0007519,GO:0008134,GO:0008150,GO:0008152,GO:0008284,GO:0009058,GO:0009059,GO:0009653,GO:0009887,GO:0009888,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0014706,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019899,GO:0030154,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032774,GO:0033613,GO:0034641,GO:0034645,GO:0034654,GO:0035914,GO:0036075,GO:0042127,GO:0042802,GO:0042803,GO:0042826,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043565,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045893,GO:0045935,GO:0045944,GO:0046483,GO:0046982,GO:0046983,GO:0048513,GO:0048518,GO:0048522,GO:0048660,GO:0048661,GO:0048705,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051216,GO:0051252,GO:0051254,GO:0060255,GO:0060348,GO:0060349,GO:0060350,GO:0060537,GO:0060538,GO:0061061,GO:0061448,GO:0065007,GO:0070013,GO:0071704,GO:0072359,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902680,GO:1903506,GO:1903508,GO:1904705,GO:1904707,GO:1990837,GO:2000112,GO:2001141 |
| Evalue | 1.26e-22 |
| EggNOG OGs | COG5068@1|root,KOG0014@2759|Eukaryota,38EKQ@33154|Opisthokonta,3BKBU@33208|Metazoa,3CSKY@33213|Bilateria,48325@7711|Chordata,494J4@7742|Vertebrata,3J2KT@40674|Mammalia,4J961@91561|Cetartiodactyla |
| Description | enhancer factor 2D |
| COG category | K |
| BRITE | ko00000,ko00001,ko03000,ko04131 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Gchil7546.t1 ID=Gchil7546.t1|Name=Gchil7546.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=659bp MDSGSNNTLSTSSRPPAPHKRGKIQIRRITDNRTRQVTFLKRKNGLLKKA MELGVLCDCEVAVIVYNPHNGKLFEYSSISMERVLNRYATYSGPSERRKP EQFFDVGAAKGHSNIPVNEPNVAIAAQNASLAASNRQRPTYKFEEEQDGM GIAKKRKLASGETPTFVFSGEGIPIPHLVNQPVSTAVPKMDSEASRQNMG LRNPTHTVPLTQIVQVPHPLPVLPIQYPVDGYGHVSDSAHRMTSTTEPSH PISHTMSHLDYMPQAQNEDRFIQLGPNVENKRLRQTSRAPPISTHVPLTY ATGHPPSQVYQRMFEEPVTNAPPPAAGSGPPKHEMMHPEPQNRPGEEHIL NYREEEGYAAARDWPYQGHGTVAEGNRERDEHCSNQTSLGIPTSRAGTAD VPHSEALPQHPQEKQGVEISTSGTEDVEFPRSEAPADHSLAKNGGDFSEV PDGTNLKKTLQQPEKNEYSNKENERTENSNKENERTENSNKENERTENSN KENERLENVPPPKLGLRRDGALPGPSSEGGAHITPSLSAPLIPTLSEALG SIPRLQIPATPNGQPWALSSLSNDGGNSVSLTPFFNLDSTSARGRARNPF APSPGSGVVPLTPRFFGLEQSSTRSLFRNTDTTPFAPGMSDGEQGGSGEQ QPGDGKPE* back to topspliced messenger RNA >Gchil7546.t1 ID=Gchil7546.t1|Name=Gchil7546.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1977bp|location=Sequence derived from alignment at tig00000007_pilon:1858343..1860581+ (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.
ATGGATTCTGGTAGTAACAATACGCTGTCTACTTCTTCGCGCCCTCCCGC TCCGCACAAACGAGGAAAGATACAAATTCGCAGAATTACAGACAATCGAA CCAGACAGGTTACTTTCCTCAAGCGCAAGAATGGCCTTCTTAAGAAGGCC ATGGAATTGGGAGTTCTCTGTGATTGCGAAGTAGCCGTTATCGTTTACAA CCCCCACAATGGAAAACTTTTTGAGTATAGCTCTATCTCTATGGAAAGAG TTCTCAATCGCTATGCTACTTACAGCGGCCCGAGCGAGCGCCGAAAGCCT GAACAGTTCTTCGATGTAGGAGCCGCAAAAGGACACTCCAATATACCAGT TAACGAACCAAATGTTGCCATTGCCGCACAAAATGCCTCATTGGCTGCCT CAAATCGTCAAAGACCGACATATAAGTTTGAAGAAGAACAAGATGGGATG GGAATAGCAAAGAAGCGAAAGCTTGCCTCTGGCGAGACACCAACTTTTGT CTTCTCTGGAGAGGGGATACCTATTCCTCACCTCGTGAATCAACCAGTTT CGACTGCGGTCCCAAAAATGGATAGTGAAGCAAGCAGACAGAATATGGGT CTTCGTAACCCAACCCACACTGTGCCCCTTACACAGATTGTGCAGGTTCC GCACCCTTTGCCGGTTCTTCCCATCCAGTATCCAGTGGATGGATACGGGC ATGTTTCCGATAGTGCACATAGAATGACATCCACTACCGAGCCTTCTCAC CCTATTTCTCATACGATGTCTCATTTGGATTACATGCCACAAGCGCAAAA CGAGGATCGGTTCATACAACTCGGCCCAAATGTAGAAAATAAGCGGCTAC GGCAGACATCAAGAGCCCCTCCAATCAGCACTCACGTACCCTTAACGTAT GCTACCGGGCATCCGCCAAGTCAAGTTTATCAGCGGATGTTTGAAGAGCC TGTCACCAACGCACCTCCTCCTGCGGCGGGAAGCGGTCCGCCAAAACATG AAATGATGCATCCAGAACCCCAAAATAGACCTGGCGAGGAGCATATTCTG AATTATAGAGAGGAAGAAGGATACGCTGCAGCTCGAGATTGGCCTTATCA GGGGCATGGGACGGTCGCAGAAGGCAACAGAGAGCGAGACGAGCACTGTT CAAACCAAACCTCACTTGGGATCCCCACATCTCGCGCTGGCACAGCGGAC GTCCCTCATTCCGAAGCTCTACCGCAGCATCCGCAGGAGAAACAGGGTGT TGAGATCTCGACATCTGGTACTGAAGACGTGGAGTTTCCTCGTTCTGAGG CTCCAGCTGATCATTCGCTGGCGAAGAATGGAGGCGACTTCAGCGAAGTT CCCGATGGAACTAACCTAAAAAAAACCCTTCAACAACCAGAGAAGAACGA ATACTCGAATAAGGAGAATGAGCGTACGGAAAACTCGAATAAGGAGAATG AGCGTACGGAAAACTCGAATAAGGAGAATGAGCGTACGGAAAACTCGAAT AAGGAGAATGAGCGTCTCGAGAACGTCCCTCCTCCAAAACTTGGGCTCCG GCGAGATGGCGCACTACCGGGGCCCTCATCAGAAGGCGGTGCTCACATCA CCCCAAGCCTGAGTGCGCCTCTAATTCCAACTCTATCGGAAGCTCTAGGA AGCATTCCACGACTACAGATCCCCGCTACACCGAATGGTCAACCCTGGGC TTTAAGTTCTTTGTCGAATGACGGAGGCAACTCTGTGTCGCTCACCCCAT TCTTTAATCTAGACAGCACATCTGCTAGAGGAAGAGCACGGAATCCTTTT GCCCCTTCCCCGGGAAGCGGGGTAGTCCCACTCACTCCGAGGTTCTTCGG TCTTGAGCAGTCGAGTACCAGGTCTTTGTTTCGAAATACCGATACAACTC CTTTCGCCCCGGGTATGAGTGATGGAGAACAAGGAGGAAGTGGAGAACAA CAGCCCGGGGATGGTAAACCGGAATAG back to topprotein sequence of Gchil7546.t1 >Gchil7546.t1 ID=Gchil7546.t1|Name=Gchil7546.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=659bp
MDSGSNNTLSTSSRPPAPHKRGKIQIRRITDNRTRQVTFLKRKNGLLKKA MELGVLCDCEVAVIVYNPHNGKLFEYSSISMERVLNRYATYSGPSERRKP EQFFDVGAAKGHSNIPVNEPNVAIAAQNASLAASNRQRPTYKFEEEQDGM GIAKKRKLASGETPTFVFSGEGIPIPHLVNQPVSTAVPKMDSEASRQNMG LRNPTHTVPLTQIVQVPHPLPVLPIQYPVDGYGHVSDSAHRMTSTTEPSH PISHTMSHLDYMPQAQNEDRFIQLGPNVENKRLRQTSRAPPISTHVPLTY ATGHPPSQVYQRMFEEPVTNAPPPAAGSGPPKHEMMHPEPQNRPGEEHIL NYREEEGYAAARDWPYQGHGTVAEGNRERDEHCSNQTSLGIPTSRAGTAD VPHSEALPQHPQEKQGVEISTSGTEDVEFPRSEAPADHSLAKNGGDFSEV PDGTNLKKTLQQPEKNEYSNKENERTENSNKENERTENSNKENERTENSN KENERLENVPPPKLGLRRDGALPGPSSEGGAHITPSLSAPLIPTLSEALG SIPRLQIPATPNGQPWALSSLSNDGGNSVSLTPFFNLDSTSARGRARNPF APSPGSGVVPLTPRFFGLEQSSTRSLFRNTDTTPFAPGMSDGEQGGSGEQ QPGDGKPE* back to topmRNA from alignment at tig00000007_pilon:1858343..1860581+ Legend: polypeptidestart_codonCDSexonintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gchil7546.t1 ID=Gchil7546.t1|Name=Gchil7546.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=2239bp|location=Sequence derived from alignment at tig00000007_pilon:1858343..1860581+ (Gracilaria chilensis NLEC103_M9 male) ATGGATTCTGGTAGTAACAATACGCTGTCTACTTCTTCGCGCCCTCCCGC
TCCGCACAAACGAGGAAAGATACAAATTCGCAGAATTACAGACAATCGAA
CCAGACAGGTACGTCACTCGATCAAATACAAACGCATCCTTCTTGATGCT
CAGTGCCTGACCTGTCAACAATGATTCTATTTCGGTGCAGGTTACTTTCC
TCAAGCGCAAGAATGGCCTTCTTAAGAAGGCCATGGAATTGGTATGTCTG
ATTGCATTCTATATTGCTCTGTACGCGTATTTTTTGGGGGGGACAGTAGT
GCTCACGTCTGTAACTTTAATTATTGTCTCGGTCCGAATCAGGGAGTTCT
CTGTGATTGCGAAGTAGCCGTTATCGTTTACAACCCCCACAATGGAAAAC
TTTTTGAGTATAGCTCTATCTCTATGGAAAGAGTTCTCAATCGCTATGCT
ACTTACAGCGGCCCGAGCGAGCGCCGAAAGCCTGAACAGGTATGCAAAAT
GAGCCAACAAACTAATTCTAGGTCTATCAAAACTAACAATTTCTATCATT
TGGTACCATTTCCCCCAGTTCTTCGATGTAGGAGCCGCAAAAGGACACTC
CAATATACCAGTTAACGAACCAAATGTTGCCATTGCCGCACAAAATGCCT
CATTGGCTGCCTCAAATCGTCAAAGACCGACATATAAGTTTGAAGAAGAA
CAAGATGGGATGGGAATAGCAAAGAAGCGAAAGCTTGCCTCTGGCGAGAC
ACCAACTTTTGTCTTCTCTGGAGAGGGGATACCTATTCCTCACCTCGTGA
ATCAACCAGTTTCGACTGCGGTCCCAAAAATGGATAGTGAAGCAAGCAGA
CAGAATATGGGTCTTCGTAACCCAACCCACACTGTGCCCCTTACACAGAT
TGTGCAGGTTCCGCACCCTTTGCCGGTTCTTCCCATCCAGTATCCAGTGG
ATGGATACGGGCATGTTTCCGATAGTGCACATAGAATGACATCCACTACC
GAGCCTTCTCACCCTATTTCTCATACGATGTCTCATTTGGATTACATGCC
ACAAGCGCAAAACGAGGATCGGTTCATACAACTCGGCCCAAATGTAGAAA
ATAAGCGGCTACGGCAGACATCAAGAGCCCCTCCAATCAGCACTCACGTA
CCCTTAACGTATGCTACCGGGCATCCGCCAAGTCAAGTTTATCAGCGGAT
GTTTGAAGAGCCTGTCACCAACGCACCTCCTCCTGCGGCGGGAAGCGGTC
CGCCAAAACATGAAATGATGCATCCAGAACCCCAAAATAGACCTGGCGAG
GAGCATATTCTGAATTATAGAGAGGAAGAAGGATACGCTGCAGCTCGAGA
TTGGCCTTATCAGGGGCATGGGACGGTCGCAGAAGGCAACAGAGAGCGAG
ACGAGCACTGTTCAAACCAAACCTCACTTGGGATCCCCACATCTCGCGCT
GGCACAGCGGACGTCCCTCATTCCGAAGCTCTACCGCAGCATCCGCAGGA
GAAACAGGGTGTTGAGATCTCGACATCTGGTACTGAAGACGTGGAGTTTC
CTCGTTCTGAGGCTCCAGCTGATCATTCGCTGGCGAAGAATGGAGGCGAC
TTCAGCGAAGTTCCCGATGGAACTAACCTAAAAAAAACCCTTCAACAACC
AGAGAAGAACGAATACTCGAATAAGGAGAATGAGCGTACGGAAAACTCGA
ATAAGGAGAATGAGCGTACGGAAAACTCGAATAAGGAGAATGAGCGTACG
GAAAACTCGAATAAGGAGAATGAGCGTCTCGAGAACGTCCCTCCTCCAAA
ACTTGGGCTCCGGCGAGATGGCGCACTACCGGGGCCCTCATCAGAAGGCG
GTGCTCACATCACCCCAAGCCTGAGTGCGCCTCTAATTCCAACTCTATCG
GAAGCTCTAGGAAGCATTCCACGACTACAGATCCCCGCTACACCGAATGG
TCAACCCTGGGCTTTAAGTTCTTTGTCGAATGACGGAGGCAACTCTGTGT
CGCTCACCCCATTCTTTAATCTAGACAGCACATCTGCTAGAGGAAGAGCA
CGGAATCCTTTTGCCCCTTCCCCGGGAAGCGGGGTAGTCCCACTCACTCC
GAGGTTCTTCGGTCTTGAGCAGTCGAGTACCAGGTCTTTGTTTCGAAATA
CCGATACAACTCCTTTCGCCCCGGGTATGAGTGATGGAGAACAAGGAGGA
AGTGGAGAACAACAGCCCGGGGATGGTAAACCGGAATAG back to topCoding sequence (CDS) from alignment at tig00000007_pilon:1858343..1860581+ >Gchil7546.t1 ID=Gchil7546.t1|Name=Gchil7546.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=1977bp|location=Sequence derived from alignment at tig00000007_pilon:1858343..1860581+ (Gracilaria chilensis NLEC103_M9 male) ATGGATTCTGGTAGTAACAATACGCTGTCTACTTCTTCGCGCCCTCCCGC TCCGCACAAACGAGGAAAGATACAAATTCGCAGAATTACAGACAATCGAA CCAGACAGGTTACTTTCCTCAAGCGCAAGAATGGCCTTCTTAAGAAGGCC ATGGAATTGGGAGTTCTCTGTGATTGCGAAGTAGCCGTTATCGTTTACAA CCCCCACAATGGAAAACTTTTTGAGTATAGCTCTATCTCTATGGAAAGAG TTCTCAATCGCTATGCTACTTACAGCGGCCCGAGCGAGCGCCGAAAGCCT GAACAGTTCTTCGATGTAGGAGCCGCAAAAGGACACTCCAATATACCAGT TAACGAACCAAATGTTGCCATTGCCGCACAAAATGCCTCATTGGCTGCCT CAAATCGTCAAAGACCGACATATAAGTTTGAAGAAGAACAAGATGGGATG GGAATAGCAAAGAAGCGAAAGCTTGCCTCTGGCGAGACACCAACTTTTGT CTTCTCTGGAGAGGGGATACCTATTCCTCACCTCGTGAATCAACCAGTTT CGACTGCGGTCCCAAAAATGGATAGTGAAGCAAGCAGACAGAATATGGGT CTTCGTAACCCAACCCACACTGTGCCCCTTACACAGATTGTGCAGGTTCC GCACCCTTTGCCGGTTCTTCCCATCCAGTATCCAGTGGATGGATACGGGC ATGTTTCCGATAGTGCACATAGAATGACATCCACTACCGAGCCTTCTCAC CCTATTTCTCATACGATGTCTCATTTGGATTACATGCCACAAGCGCAAAA CGAGGATCGGTTCATACAACTCGGCCCAAATGTAGAAAATAAGCGGCTAC GGCAGACATCAAGAGCCCCTCCAATCAGCACTCACGTACCCTTAACGTAT GCTACCGGGCATCCGCCAAGTCAAGTTTATCAGCGGATGTTTGAAGAGCC TGTCACCAACGCACCTCCTCCTGCGGCGGGAAGCGGTCCGCCAAAACATG AAATGATGCATCCAGAACCCCAAAATAGACCTGGCGAGGAGCATATTCTG AATTATAGAGAGGAAGAAGGATACGCTGCAGCTCGAGATTGGCCTTATCA GGGGCATGGGACGGTCGCAGAAGGCAACAGAGAGCGAGACGAGCACTGTT CAAACCAAACCTCACTTGGGATCCCCACATCTCGCGCTGGCACAGCGGAC GTCCCTCATTCCGAAGCTCTACCGCAGCATCCGCAGGAGAAACAGGGTGT TGAGATCTCGACATCTGGTACTGAAGACGTGGAGTTTCCTCGTTCTGAGG CTCCAGCTGATCATTCGCTGGCGAAGAATGGAGGCGACTTCAGCGAAGTT CCCGATGGAACTAACCTAAAAAAAACCCTTCAACAACCAGAGAAGAACGA ATACTCGAATAAGGAGAATGAGCGTACGGAAAACTCGAATAAGGAGAATG AGCGTACGGAAAACTCGAATAAGGAGAATGAGCGTACGGAAAACTCGAAT AAGGAGAATGAGCGTCTCGAGAACGTCCCTCCTCCAAAACTTGGGCTCCG GCGAGATGGCGCACTACCGGGGCCCTCATCAGAAGGCGGTGCTCACATCA CCCCAAGCCTGAGTGCGCCTCTAATTCCAACTCTATCGGAAGCTCTAGGA AGCATTCCACGACTACAGATCCCCGCTACACCGAATGGTCAACCCTGGGC TTTAAGTTCTTTGTCGAATGACGGAGGCAACTCTGTGTCGCTCACCCCAT TCTTTAATCTAGACAGCACATCTGCTAGAGGAAGAGCACGGAATCCTTTT GCCCCTTCCCCGGGAAGCGGGGTAGTCCCACTCACTCCGAGGTTCTTCGG TCTTGAGCAGTCGAGTACCAGGTCTTTGTTTCGAAATACCGATACAACTC CTTTCGCCCCGGGTATGAGTGATGGAGAACAAGGAGGAAGTGGAGAACAA CAGCCCGGGGATGGTAAACCGGAATAG back to top
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