Gchil2194.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil2194.t1
Unique Name	Gchil2194.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	240

Homology

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BLAST of Gchil2194.t1 vs. uniprot
Match: A0A2V3J2S2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2S2_9FLOR)

HSP 1 Score: 291 bits (744), Expect = 1.410e-96
Identity = 158/241 (65.56%), Postives = 185/241 (76.76%), Query Frame = 0

Query:    1 MDNPDANASNRSALRQPFIDTANALAYFYKQAGVAERDARDAGSRAAFQKIIQWAALKSRSAEPVSAADVISFCAAELAQLPTHSVSTERAPHSSHVSNAPTCPPASRV-DADMPHGEAPTVSYVPRDDALVSDIKKLHVNPRKRQRVDISDAFIRACRNQEDSFVFTAPDQSHGLQNHDGNSNALG-HSGLQGMQHNALHSKKDIKDSREFHIHHTSGNEYISRKPRHPKSHIYDKHKRK 239
            MDN + + SNR+ALRQPFIDTANALA  YKQ+  AERDARDAGSR A+Q+IIQWAA KSRS EP+SAADVISFCA EL QLP +S S++RA +S   S  P     +R  D +MP  +AP V+YV RDDALVSDIKKLHVNPRKRQRVDISDAFIRAC  +E++FVF+ PD  H LQNHD +SN L   + L   Q N   SKKD+KD R+  +HHTSGN+Y SRKPR+PK H+YDKHKRK
Sbjct:    1 MDNSETHGSNRNALRQPFIDTANALASLYKQSVTAERDARDAGSRVAYQRIIQWAAKKSRSGEPLSAADVISFCATELTQLPNNSPSSDRATNSPPQSTPPISTSQARPQDTEMPTCDAPPVAYVARDDALVSDIKKLHVNPRKRQRVDISDAFIRACSGEENAFVFS-PDHLHALQNHDNSSNPLSAQNALHATQQNTFQSKKDVKDGRDMLVHHTSGNDYTSRKPRNPKMHMYDKHKRK 240

The following BLAST results are available for this feature:

BLAST of Gchil2194.t1 vs. uniprot

BLAST of Gchil2194.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3J2S2_9FLOR	1.410e-96	65.56	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 198..227
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 85..102
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 176..195
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 85..108
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 176..239

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000228_pilon	contig	tig00000228_pilon:233756..234475 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil2194.t1	Gchil2194.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00000228_pilon 233756..234475 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil2194.t1 ID=Gchil2194.t1|Name=Gchil2194.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=240bp
MDNPDANASNRSALRQPFIDTANALAYFYKQAGVAERDARDAGSRAAFQK
IIQWAALKSRSAEPVSAADVISFCAAELAQLPTHSVSTERAPHSSHVSNA
PTCPPASRVDADMPHGEAPTVSYVPRDDALVSDIKKLHVNPRKRQRVDIS
DAFIRACRNQEDSFVFTAPDQSHGLQNHDGNSNALGHSGLQGMQHNALHS
KKDIKDSREFHIHHTSGNEYISRKPRHPKSHIYDKHKRK*