Gchil325.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil325.t1
Unique NameGchil325.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length180
Homology
BLAST of Gchil325.t1 vs. uniprot
Match: A0A2V3IXY5_9FLOR (DDE-1 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXY5_9FLOR)

HSP 1 Score: 113 bits (282), Expect = 8.670e-28
Identity = 63/151 (41.72%), Postives = 97/151 (64.24%), Query Frame = 0
Query:    1 MLRVVSQNRRRWEKKISESHVATIITKAYAKSLTVQDIAAGFWKCVISPFDDCRMFAEARPHIFVQPNRISS-HYMVRMMDEIENRKAAEIVDDVHVHSSGFLDTTYGPVLTMEAALGLMRLSERSKAISYTKALSKAAEKQRRETIERER 150
            +L  V ++R R  K ++E  V+ II+KAY  S+T  +I +GF +  I  FDDCR+F++ARP+   +P R++S   +V MMD+  +R   ++++DVHVHSSGFL+  YG +L  +AALGL++L + SK         K AEK R   +E+E+
Sbjct:   38 LLEKVYRSRCRAYKPMNEFDVSQIISKAYTLSVTNSNINSGFSRSGIYRFDDCRVFSQARPYSLEEPYRLASVEQIVDMMDKENDRSIEDVINDVHVHSSGFLNNKYGAILISDAALGLLKLQDLSKKQQRNVKDMKGAEKARMVAVEKEK 188          
BLAST of Gchil325.t1 vs. uniprot
Match: A0A2V3IGC3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGC3_9FLOR)

HSP 1 Score: 94.7 bits (234), Expect = 2.110e-21
Identity = 54/136 (39.71%), Postives = 85/136 (62.50%), Query Frame = 0
Query:   16 ISESHVATIITKAYAKSLTVQDIAAGFWKCVISPFDDCRMFAEARPHIFVQPNRISS-HYMVRMMDEIENRKAAEIVDDVHVHSSGFLDTTYGPVLTMEAALGLMRLSERSKAISYTKALSKAAEKQRRETIERER 150
            ++E  V+ II+KA+  S+T  +I +GF +C I  FDDC +F++ARP+   +P R++    MV M+++  +    + ++DV+VHSSGFLDTTYG VLT +AA GL++L    K         + AEK     +E+E+
Sbjct:    1 MNEFDVSQIISKAHTLSVTNSNINSGFSRCGIYLFDDCHLFSQARPYSLEEPYRLAIVEEMVNMINKENDWSIEDGINDVNVHSSGFLDTTYGVVLTFDAAWGLLKLQYLRKKQQRNVKDVEGAEKAWIVAVEKEK 136          
BLAST of Gchil325.t1 vs. uniprot
Match: A0A2V3IGH6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGH6_9FLOR)

HSP 1 Score: 60.1 bits (144), Expect = 1.040e-8
Identity = 31/76 (40.79%), Postives = 46/76 (60.53%), Query Frame = 0
Query:   75 MVRMMDEIENRKAAEIVDDVHVHSSGFLDTTYGPVLTMEAALGLMRLSERSKAISYTKALSKAAEKQRRETIERER 150
            MV MMD+  +R   ++++ VHVHSSGFLDTTYG V   + ALGL++L +  K         K  E+ +   +E+E+
Sbjct:    1 MVYMMDKEHDRSIEDVINHVHVHSSGFLDTTYGVVRISDTALGLLKLRDLGKKQQRNVKDVKGVEEAQMVAVEKEK 76          
The following BLAST results are available for this feature:
BLAST of Gchil325.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IXY5_9FLOR8.670e-2841.72DDE-1 domain-containing protein n=1 Tax=Gracilario... [more]
A0A2V3IGC3_9FLOR2.110e-2139.71Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IGH6_9FLOR1.040e-840.79Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..150
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 169..179
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 151..168

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000212_piloncontigtig00000212_pilon:53415..53954 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil325.t1Gchil325.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000212_pilon 53415..53954 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil325.t1 ID=Gchil325.t1|Name=Gchil325.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=180bp
MLRVVSQNRRRWEKKISESHVATIITKAYAKSLTVQDIAAGFWKCVISPF
DDCRMFAEARPHIFVQPNRISSHYMVRMMDEIENRKAAEIVDDVHVHSSG
FLDTTYGPVLTMEAALGLMRLSERSKAISYTKALSKAAEKQRRETIERER
VVLRDAIMIALMLCVAQGCMESRSSCRGR*
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