Gchil369.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil369.t1
Unique NameGchil369.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length178
Homology
BLAST of Gchil369.t1 vs. uniprot
Match: A0A2V3IRR8_9FLOR (Histone H1-II n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRR8_9FLOR)

HSP 1 Score: 133 bits (334), Expect = 2.550e-36
Identity = 69/83 (83.13%), Postives = 73/83 (87.95%), Query Frame = 0
Query:    1 MPAARKAVAPKPTYKVMVTESIKDLADRTGSSVQAITKQLRAKYNIDINKPALIKAIKKGVETGDLVQIKASYKLAKKAPVLK 83
            MPAA +    KPTY VMVTESIK+L DRTGSSVQAI+KQLRAKYNIDINKPALIKAIKKGV+TGD VQIKASYKLAKK PV K
Sbjct:    1 MPAAARKAVVKPTYAVMVTESIKELGDRTGSSVQAISKQLRAKYNIDINKPALIKAIKKGVQTGDFVQIKASYKLAKKVPVPK 83          
BLAST of Gchil369.t1 vs. uniprot
Match: R7Q4J4_CHOCR (H15 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q4J4_CHOCR)

HSP 1 Score: 117 bits (292), Expect = 3.560e-30
Identity = 62/82 (75.61%), Postives = 69/82 (84.15%), Query Frame = 0
Query:    1 MPAARKAVAPKPTYKVMVTESIKDLADRTGSSVQAITKQLRAKYNIDINKPALIKAIKKGVETGDLVQIKASYKL--AKKAP 80
            MPA + A  PKPTY VMV ESIK L DRTGSSVQAI+K ++A+Y+IDINKPAL+KAIKKGVE GDLVQIKASYKL   KKAP
Sbjct:    1 MPAKKAAAPPKPTYAVMVAESIKALNDRTGSSVQAISKHVKAQYHIDINKPALVKAIKKGVEAGDLVQIKASYKLNKLKKAP 82          
BLAST of Gchil369.t1 vs. uniprot
Match: A0A7S1ET73_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ET73_9RHOD)

HSP 1 Score: 81.6 bits (200), Expect = 1.860e-16
Identity = 41/71 (57.75%), Postives = 53/71 (74.65%), Query Frame = 0
Query:    9 APKPTYKVMVTESIKDLADRTGSSVQAITKQLRAKYNIDINKPALIKAIKKGVETGDLVQIKASYKLAKKA 79
            A  P Y  MV ++IK++ DRTGSS+ AITK +   Y +++NK AL KAIKKGVE G LV++KASYKL+ KA
Sbjct:    8 ASHPPYTSMVAKAIKEIGDRTGSSMPAITKFIGEHYKVEVNKVALSKAIKKGVEDGSLVRVKASYKLSPKA 78          
BLAST of Gchil369.t1 vs. uniprot
Match: A0A5J4Z4T4_PORPP (Histone H1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z4T4_PORPP)

HSP 1 Score: 73.2 bits (178), Expect = 2.960e-13
Identity = 38/79 (48.10%), Postives = 53/79 (67.09%), Query Frame = 0
Query:    6 KAVAPKPTYKVMVTESIKDLADRTGSSVQAITKQLRAKYNIDINKPALIKAIKKGVETGDLVQIKASYKL-AKKAPVLK 83
            K V   P Y  MV+ +IK + DRTGSS QAI K +  +Y I++NK AL +++K GV+ G L ++KASYK+ AK+ P  K
Sbjct:   26 KTVPSHPPYATMVSAAIKKIGDRTGSSQQAIAKCIGEEYKIEVNKVALSRSLKSGVDAGSLAKVKASYKVVAKEKPAPK 104          
BLAST of Gchil369.t1 vs. uniprot
Match: D8LQ80_ECTSI (Histone H1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ80_ECTSI)

HSP 1 Score: 65.1 bits (157), Expect = 2.510e-10
Identity = 33/70 (47.14%), Postives = 48/70 (68.57%), Query Frame = 0
Query:   11 KPTYKVMVTESIKDLADRTGSSVQAITKQLRAKY-NIDINKPALIKAIKKGVETGDLVQIKASYKLAKKA 79
            KPTY  MV ++IK L +R GSS+QAI K + A Y  ++     +  A+KKGVE+G  +++KASYKL+ +A
Sbjct:    5 KPTYNAMVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRSALKKGVESGKFIKMKASYKLSAEA 74          
BLAST of Gchil369.t1 vs. uniprot
Match: A0A6H5KCU1_9PHAE (H15 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCU1_9PHAE)

HSP 1 Score: 65.9 bits (159), Expect = 9.210e-10
Identity = 34/70 (48.57%), Postives = 49/70 (70.00%), Query Frame = 0
Query:   11 KPTYKVMVTESIKDLADRTGSSVQAITKQLRAKY-NIDINKPALIKAIKKGVETGDLVQIKASYKLAKKA 79
            KPTY VMV ++IK L +R GSS+QAI K + A Y  ++     +  A+KKGVE+G  +++KASYKL+ +A
Sbjct:   98 KPTYNVMVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRGALKKGVESGKFIKMKASYKLSPEA 167          
BLAST of Gchil369.t1 vs. uniprot
Match: A0A5B8MGH6_9CHLO (Histone H1 n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MGH6_9CHLO)

HSP 1 Score: 62.4 bits (150), Expect = 2.380e-9
Identity = 36/76 (47.37%), Postives = 50/76 (65.79%), Query Frame = 0
Query:    1 MPAARKAVAPKPTYKVMVTESIKDLADRTGSSVQAITKQLRAKYNIDIN-KPALIKAIKKGVETGDLVQIKASYKL 75
            MPAA K+    P Y+ MV  ++ DL DRTGSS  AI K ++A Y++  N    L + +K+ VE+G LV++KASYKL
Sbjct:    1 MPAAAKSA--NPPYEKMVKAALVDLKDRTGSSTYAIAKYMKANYDLPENFTKTLSRLLKRFVESGKLVKVKASYKL 74          
BLAST of Gchil369.t1 vs. uniprot
Match: A0A7S3E2R7_9CHLO (Hypothetical protein n=1 Tax=Chloropicon laureae TaxID=464258 RepID=A0A7S3E2R7_9CHLO)

HSP 1 Score: 62.4 bits (150), Expect = 6.410e-9
Identity = 35/70 (50.00%), Postives = 47/70 (67.14%), Query Frame = 0
Query:    7 AVAPKPTYKVMVTESIKDLADRTGSSVQAITKQLRAKYNIDIN-KPALIKAIKKGVETGDLVQIKASYKL 75
            A +  P+Y+ MV  ++  L DRTGSS  AI K L+A Y++  N   AL + +KK VETG LV++KASYKL
Sbjct:   59 ATSSHPSYEAMVKAALVALKDRTGSSTHAIAKYLKANYDLPENFGKALSRYLKKMVETGKLVKVKASYKL 128          
BLAST of Gchil369.t1 vs. uniprot
Match: A0A7S2YW41_9CHLO (Hypothetical protein n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A7S2YW41_9CHLO)

HSP 1 Score: 60.5 bits (145), Expect = 1.450e-8
Identity = 38/81 (46.91%), Postives = 46/81 (56.79%), Query Frame = 0
Query:    4 ARKAVAPKPTYKVMVTESIKDLADRTGSSVQAITKQLRAKYNIDIN-KPALIKAIKKGVETGDLVQIKASYKLA---KKAP 80
            A K     P Y  M+  +I  L +RTGSSVQAITK + A Y +  N K  L   +KK    G LV++KASYKL    KKAP
Sbjct:   18 AAKPAPSHPPYVEMIKAAISSLKERTGSSVQAITKYVEANYKLPDNFKKVLSNQLKKLAAEGKLVKVKASYKLGDALKKAP 98          
BLAST of Gchil369.t1 vs. uniprot
Match: A0A830HJ65_9CHLO (H15 domain-containing protein n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830HJ65_9CHLO)

HSP 1 Score: 60.5 bits (145), Expect = 1.580e-8
Identity = 38/81 (46.91%), Postives = 46/81 (56.79%), Query Frame = 0
Query:    4 ARKAVAPKPTYKVMVTESIKDLADRTGSSVQAITKQLRAKYNIDIN-KPALIKAIKKGVETGDLVQIKASYKLA---KKAP 80
            A K     P Y  M+  +I  L +RTGSSVQAITK + A Y +  N K  L   +KK    G LV++KASYKL    KKAP
Sbjct:    6 AAKPAPSHPPYVEMIKAAISSLKERTGSSVQAITKYVEANYKLPDNFKKVLSNQLKKLAAEGKLVKVKASYKLGDALKKAP 86          
The following BLAST results are available for this feature:
BLAST of Gchil369.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IRR8_9FLOR2.550e-3683.13Histone H1-II n=1 Tax=Gracilariopsis chorda TaxID=... [more]
R7Q4J4_CHOCR3.560e-3075.61H15 domain-containing protein n=1 Tax=Chondrus cri... [more]
A0A7S1ET73_9RHOD1.860e-1657.75Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A5J4Z4T4_PORPP2.960e-1348.10Histone H1 n=1 Tax=Porphyridium purpureum TaxID=35... [more]
D8LQ80_ECTSI2.510e-1047.14Histone H1 n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
A0A6H5KCU1_9PHAE9.210e-1048.57H15 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A5B8MGH6_9CHLO2.380e-947.37Histone H1 n=1 Tax=Chloropicon primus TaxID=176429... [more]
A0A7S3E2R7_9CHLO6.410e-950.00Hypothetical protein n=1 Tax=Chloropicon laureae T... [more]
A0A7S2YW41_9CHLO1.450e-846.91Hypothetical protein n=1 Tax=Pycnococcus provasoli... [more]
A0A830HJ65_9CHLO1.580e-846.91H15 domain-containing protein n=1 Tax=Pycnococcus ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005818Linker histone H1/H5, domain H15SMARTSM00526h15plus2coord: 8..72
e-value: 2.1E-19
score: 80.5
IPR005818Linker histone H1/H5, domain H15PFAMPF00538Linker_histonecoord: 11..75
e-value: 2.3E-17
score: 63.0
IPR005818Linker histone H1/H5, domain H15PROSITEPS51504H15coord: 10..77
score: 25.745867
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 4..80
e-value: 9.9E-19
score: 69.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 135..151
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 114..177
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 120..134
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 10..85

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000212_piloncontigtig00000212_pilon:644412..645066 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil369.t1Gchil369.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000212_pilon 644412..645066 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil369.t1 ID=Gchil369.t1|Name=Gchil369.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=178bp
MPAARKAVAPKPTYKVMVTESIKDLADRTGSSVQAITKQLRAKYNIDINK
PALIKAIKKGVETGDLVQIKASYKLAKKAPVLKKKTTVVVKPTKPTVKAT
TTTTTTTTTTTAAKKKATPSAAKKAIKPKKSLSKTRSTRTVVTTASAVKK
RTTKRSAAARKDASKMAALGKKRSAKK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005818Histone_H1/H5_H15
IPR036388WH-like_DNA-bd_sf
IPR036390WH_DNA-bd_sf