Gchil357.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil357.t1
Unique NameGchil357.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length495
Homology
BLAST of Gchil357.t1 vs. uniprot
Match: A0A2V3INU4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INU4_9FLOR)

HSP 1 Score: 613 bits (1580), Expect = 1.660e-215
Identity = 311/493 (63.08%), Postives = 371/493 (75.25%), Query Frame = 0
Query:    1 MLFLAKTLVAAFVLFAVCAQAITHLHKGPQSDEEEFVLRGFSHGSSMSTARPIDADFERLSDHTVHFAVDLKMDAVLWEELEDDNT-MMYCMRHGDDRYATIELTGESLDREDYSPGSAFVIDARRWTQLCGSIPSLDGINRLDPVLFFKMNNVTFLDSIQKIRLSLQAISGSVVAPSIRFDVLQRPLKHHTKRRYVLQDRPLYESTSRMLEAPIGSLPGGESHSGSEVFSEFALFPGANISVSGEVEGTINNVRITRLFNLEVGWEQRLRANISSRLVASRTYSASNEKEVHRKPIRGATSTGRLLFFGTYQLNASTVVDVVQQITADSGVNAFLRASHENLEAVTASFATNDVDADSLLPPDIGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGDISLVGMYTATLGLEASLQMKSPPFFPLPYDGRRAKGPCQECHRLEGRASVVGKDLQYRIFENGVLEKHKVTDRTLFEKELSTVCAFAQVC 492
            ML  ++ L  + +     A+A+THLHKGPQ D EEFVLRGF+HGS+ S+ +  D   E  S+ TV F+VDLKMDAVLWEELEDDN  M  C+RHG+     IEL GE LD EDY PGSAFVIDA  W +LCGS+P L GI+  DPVLFF+M NVT LDS  K+RL + A+ GS VAPS++FDVL+RPLK HT++RY+  D PLY + SRMLEAPIGSLPG  SHSGSEVFSEFA+FPGANIS+SG VEG I NVRITRLF LEV WEQ ++A+ISSR +ASR YSASNE+EVHRKPI+GATS+GR+ FFG Y + ASTVV++VQ++ ADSGVNAFLRASHEN+EAVTASFA+N+++A+SL+PPD GS                                 L  ISLVG YTATLGL+AS+QM+ PPF P+P+ G R  G CQECHRL+GRASV GKDLQY I ENGVL+KHKV D++LFEKE +TVCAFAQVC
Sbjct:    1 MLSRSRCLWISLIFLVAYAEALTHLHKGPQHDGEEFVLRGFTHGSASSSTQQYDGHIETQSNRTVSFSVDLKMDAVLWEELEDDNIEMSTCIRHGNTHDVRIELIGERLDPEDYVPGSAFVIDAEHWEKLCGSVPFLRGIDGQDPVLFFRMTNVTELDSAPKLRLDMTAVPGSFVAPSVQFDVLERPLKQHTQKRYMFHDSPLYSAASRMLEAPIGSLPGDISHSGSEVFSEFAIFPGANISLSGVVEGNIRNVRITRLFQLEVSWEQNVKADISSRFIASRMYSASNEREVHRKPIQGATSSGRIAFFGRYSVTASTVVNIVQEVQADSGVNAFLRASHENIEAVTASFASNEMEAESLVPPDFGSYGTFDINFDNVINQHIGINGFYGARTGIVVDARLAGISLVGTYTATLGLDASMQMRYPPFSPVPHSGGRVLGTCQECHRLQGRASVKGKDLQYYIHENGVLQKHKVLDQSLFEKEFTTVCAFAQVC 493          
BLAST of Gchil357.t1 vs. uniprot
Match: A0A2V3IHV2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHV2_9FLOR)

HSP 1 Score: 221 bits (563), Expect = 5.990e-63
Identity = 140/425 (32.94%), Postives = 225/425 (52.94%), Query Frame = 0
Query:   21 AITHLHKGPQSDEEEFVLRGFSHGSSMSTARPIDADFERLSDHTVHF---AVDLKMDAVLWEELEDDNTMMY-CMRHGDDRYATIELTGESLDREDYSPGSAFVIDARRWTQLCGSIPSLDGINRLDPVLFFKMNNVTFLDSIQKIRLSLQAISGSVVAPSIRFDVL---QRPLKHHTKRRYVLQDRPLYESTSRMLEAPIG-----SLPGGESHSGSEVFSEFALFPGANISVSGEVEGTINNVRITRLFNLEVGWEQRLRANISSRLVASRTYSASNEKEVHRKPIRGATSTGRLLFFGTYQLNASTVVDVVQQITADSGVNAFLRASHENLEAVTASFATNDVDADSLLPPDIGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGDISLVGMYTATLGLEASLQMKSPPFFPLPYDG 433
            A+TH H GP+++E +F+LRG      ++TA   ++  E  +   V     +V+LK DA+LW+E+  D  M+  C R+  ++   +ELTG  LD  DY   +AFVI  + W + CG++  +  ++  D VLFF +  VT   S  +++L L+ +SGS VAP +  +++   +  L H    R V +D P    TS  L+         SL      + S++  +  + PGA I  S ++EG+I+  R TRLF LE  WEQ LRANI+SR+ A+ T+ AS+ +E++R+ +   + +  + F GT +L +   +D +Q++  DSG++A + A++EN+  V A+F +  V ADSLLPP+ GS                                 +G     G   A +GL+A +Q ++PPF PL   G
Sbjct:   22 ALTHRHLGPRANESDFILRGH-----LATAHHSNSGHENANSSHVQILSVSVELKKDAILWDEVRADGIMITSCFRNVSEQVVGMELTGAHLDLSDYERDTAFVIQVKDWKKSCGTMELIPRVDPGDDVLFFVIQKVTKSRSSSRVQLELKVVSGSDVAPVVMVEIVGTGKSNLLH--SERLVFEDNPSINFTSHFLKPSDSDNEDVSLITSARQTVSQI-QQNNIVPGAQIFTSAQLEGSIDRFRFTRLFRLEAEWEQNLRANIASRVTATSTFRASDTREIYRRVLPDFSFSTSIPFLGTVRLISFMKLDFIQEVAMDSGLDAMITATNENILKVNANFGSGVVRADSLLPPNFGSSGSSILDFGNVTSQELGLSGFFGYRPALGLELTVGSEKAEGEAGAKMGLQADVQNRTPPFPPLTMGG 438          
The following BLAST results are available for this feature:
BLAST of Gchil357.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3INU4_9FLOR1.660e-21563.08Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IHV2_9FLOR5.990e-6332.94Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..17
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..494

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000212_piloncontigtig00000212_pilon:533239..534723 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil357.t1Gchil357.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000212_pilon 533239..534723 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil357.t1 ID=Gchil357.t1|Name=Gchil357.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=495bp
MLFLAKTLVAAFVLFAVCAQAITHLHKGPQSDEEEFVLRGFSHGSSMSTA
RPIDADFERLSDHTVHFAVDLKMDAVLWEELEDDNTMMYCMRHGDDRYAT
IELTGESLDREDYSPGSAFVIDARRWTQLCGSIPSLDGINRLDPVLFFKM
NNVTFLDSIQKIRLSLQAISGSVVAPSIRFDVLQRPLKHHTKRRYVLQDR
PLYESTSRMLEAPIGSLPGGESHSGSEVFSEFALFPGANISVSGEVEGTI
NNVRITRLFNLEVGWEQRLRANISSRLVASRTYSASNEKEVHRKPIRGAT
STGRLLFFGTYQLNASTVVDVVQQITADSGVNAFLRASHENLEAVTASFA
TNDVDADSLLPPDIGSYGTFDINFDNVIEQRVGLNGFYGARPGIVVEARL
GDISLVGMYTATLGLEASLQMKSPPFFPLPYDGRRAKGPCQECHRLEGRA
SVVGKDLQYRIFENGVLEKHKVTDRTLFEKELSTVCAFAQVCSS*
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