Gchil357.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGchil357.t1
Unique NameGchil357.t1
TypemRNA
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length495
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000212_piloncontigtig00000212_pilon:533239..534723 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil357Gchil357Gracilaria chilensis NLEC103_M9 malegenetig00000212_pilon 533239..534723 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil357.t1.start1Gchil357.t1.start1Gracilaria chilensis NLEC103_M9 malestart_codontig00000212_pilon 533239..533241 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil357.t1.CDS1Gchil357.t1.CDS1Gracilaria chilensis NLEC103_M9 maleCDStig00000212_pilon 533239..534723 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil357.t1.exon1Gchil357.t1.exon1Gracilaria chilensis NLEC103_M9 maleexontig00000212_pilon 533239..534723 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil357.t1.stop1Gchil357.t1.stop1Gracilaria chilensis NLEC103_M9 malestop_codontig00000212_pilon 534721..534723 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil357.t1Gchil357.t1Gracilaria chilensis NLEC103_M9 malepolypeptidetig00000212_pilon 533239..534723 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gchil357.t1 ID=Gchil357.t1|Name=Gchil357.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=495bp
MLFLAKTLVAAFVLFAVCAQAITHLHKGPQSDEEEFVLRGFSHGSSMSTA
RPIDADFERLSDHTVHFAVDLKMDAVLWEELEDDNTMMYCMRHGDDRYAT
IELTGESLDREDYSPGSAFVIDARRWTQLCGSIPSLDGINRLDPVLFFKM
NNVTFLDSIQKIRLSLQAISGSVVAPSIRFDVLQRPLKHHTKRRYVLQDR
PLYESTSRMLEAPIGSLPGGESHSGSEVFSEFALFPGANISVSGEVEGTI
NNVRITRLFNLEVGWEQRLRANISSRLVASRTYSASNEKEVHRKPIRGAT
STGRLLFFGTYQLNASTVVDVVQQITADSGVNAFLRASHENLEAVTASFA
TNDVDADSLLPPDIGSYGTFDINFDNVIEQRVGLNGFYGARPGIVVEARL
GDISLVGMYTATLGLEASLQMKSPPFFPLPYDGRRAKGPCQECHRLEGRA
SVVGKDLQYRIFENGVLEKHKVTDRTLFEKELSTVCAFAQVCSS*
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spliced messenger RNA

>Gchil357.t1 ID=Gchil357.t1|Name=Gchil357.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1485bp|location=Sequence derived from alignment at tig00000212_pilon:533239..534723+ (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCTTTTTCTTGCCAAAACCCTAGTCGCTGCATTCGTGCTCTTTGCTGT
TTGTGCCCAAGCCATCACACATCTTCACAAAGGGCCTCAAAGTGATGAAG
AAGAATTCGTTCTGCGCGGATTTAGCCATGGCTCTTCAATGTCCACCGCT
CGCCCTATCGATGCAGACTTCGAAAGACTATCCGACCACACAGTCCACTT
TGCTGTTGATCTAAAAATGGATGCTGTTCTATGGGAAGAATTAGAAGATG
ATAATACTATGATGTACTGCATGCGACATGGAGATGATCGCTACGCTACG
ATTGAGCTCACCGGGGAGTCTCTCGACAGGGAAGACTACAGCCCGGGTTC
AGCTTTTGTAATTGATGCACGACGTTGGACACAGCTTTGCGGTTCTATTC
CTTCTCTTGATGGTATTAATCGTCTCGATCCTGTACTGTTTTTTAAGATG
AACAATGTGACCTTTTTGGATTCAATCCAAAAAATTCGTTTGTCTTTACA
AGCCATATCCGGGTCCGTCGTGGCGCCGTCAATTCGCTTTGATGTTCTGC
AAAGGCCTTTGAAGCATCATACCAAAAGGAGGTATGTGCTGCAGGATAGG
CCGCTGTACGAATCCACTTCCAGAATGTTGGAAGCACCCATCGGTTCTCT
TCCGGGCGGTGAATCGCACAGTGGATCAGAAGTGTTTTCAGAGTTTGCCC
TTTTCCCTGGGGCAAACATTTCAGTTTCAGGCGAAGTGGAAGGCACAATC
AACAACGTCAGAATAACCCGCTTGTTCAATTTGGAGGTAGGATGGGAGCA
ACGCCTGAGAGCTAATATTTCGTCAAGATTGGTTGCATCACGAACCTATA
GTGCCTCAAACGAAAAGGAAGTCCACCGAAAACCGATTCGAGGGGCTACA
TCCACAGGGCGATTGTTATTCTTCGGTACTTACCAATTGAACGCATCTAC
TGTGGTGGATGTTGTTCAACAAATCACTGCGGACTCAGGAGTGAATGCCT
TCCTTCGTGCATCACATGAAAATCTTGAAGCAGTGACAGCAAGCTTTGCT
ACAAATGATGTCGATGCAGATAGTTTGCTTCCACCGGATATTGGAAGTTA
TGGCACCTTTGATATCAATTTTGACAACGTAATCGAACAACGGGTTGGAC
TTAATGGCTTTTATGGAGCTCGGCCAGGAATAGTCGTGGAGGCGCGGTTA
GGAGATATCAGTCTAGTTGGCATGTATACTGCTACCCTGGGTCTGGAAGC
GTCACTGCAAATGAAATCTCCACCGTTTTTCCCTCTACCGTACGACGGTA
GAAGAGCCAAAGGTCCTTGTCAAGAATGCCACAGGCTTGAAGGCAGAGCG
TCTGTTGTGGGAAAGGATCTACAATACCGCATATTTGAAAACGGTGTGCT
TGAGAAGCACAAAGTCACGGACAGAACGCTTTTCGAAAAAGAATTATCGA
CTGTCTGTGCCTTTGCTCAGGTATGTTCTTCGTAG
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protein sequence of Gchil357.t1

>Gchil357.t1 ID=Gchil357.t1|Name=Gchil357.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=495bp
MLFLAKTLVAAFVLFAVCAQAITHLHKGPQSDEEEFVLRGFSHGSSMSTA
RPIDADFERLSDHTVHFAVDLKMDAVLWEELEDDNTMMYCMRHGDDRYAT
IELTGESLDREDYSPGSAFVIDARRWTQLCGSIPSLDGINRLDPVLFFKM
NNVTFLDSIQKIRLSLQAISGSVVAPSIRFDVLQRPLKHHTKRRYVLQDR
PLYESTSRMLEAPIGSLPGGESHSGSEVFSEFALFPGANISVSGEVEGTI
NNVRITRLFNLEVGWEQRLRANISSRLVASRTYSASNEKEVHRKPIRGAT
STGRLLFFGTYQLNASTVVDVVQQITADSGVNAFLRASHENLEAVTASFA
TNDVDADSLLPPDIGSYGTFDINFDNVIEQRVGLNGFYGARPGIVVEARL
GDISLVGMYTATLGLEASLQMKSPPFFPLPYDGRRAKGPCQECHRLEGRA
SVVGKDLQYRIFENGVLEKHKVTDRTLFEKELSTVCAFAQVCSS*
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mRNA from alignment at tig00000212_pilon:533239..534723+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gchil357.t1 ID=Gchil357.t1|Name=Gchil357.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1485bp|location=Sequence derived from alignment at tig00000212_pilon:533239..534723+ (Gracilaria chilensis NLEC103_M9 male)
ATGCTTTTTCTTGCCAAAACCCTAGTCGCTGCATTCGTGCTCTTTGCTGT
TTGTGCCCAAGCCATCACACATCTTCACAAAGGGCCTCAAAGTGATGAAG
AAGAATTCGTTCTGCGCGGATTTAGCCATGGCTCTTCAATGTCCACCGCT
CGCCCTATCGATGCAGACTTCGAAAGACTATCCGACCACACAGTCCACTT
TGCTGTTGATCTAAAAATGGATGCTGTTCTATGGGAAGAATTAGAAGATG
ATAATACTATGATGTACTGCATGCGACATGGAGATGATCGCTACGCTACG
ATTGAGCTCACCGGGGAGTCTCTCGACAGGGAAGACTACAGCCCGGGTTC
AGCTTTTGTAATTGATGCACGACGTTGGACACAGCTTTGCGGTTCTATTC
CTTCTCTTGATGGTATTAATCGTCTCGATCCTGTACTGTTTTTTAAGATG
AACAATGTGACCTTTTTGGATTCAATCCAAAAAATTCGTTTGTCTTTACA
AGCCATATCCGGGTCCGTCGTGGCGCCGTCAATTCGCTTTGATGTTCTGC
AAAGGCCTTTGAAGCATCATACCAAAAGGAGGTATGTGCTGCAGGATAGG
CCGCTGTACGAATCCACTTCCAGAATGTTGGAAGCACCCATCGGTTCTCT
TCCGGGCGGTGAATCGCACAGTGGATCAGAAGTGTTTTCAGAGTTTGCCC
TTTTCCCTGGGGCAAACATTTCAGTTTCAGGCGAAGTGGAAGGCACAATC
AACAACGTCAGAATAACCCGCTTGTTCAATTTGGAGGTAGGATGGGAGCA
ACGCCTGAGAGCTAATATTTCGTCAAGATTGGTTGCATCACGAACCTATA
GTGCCTCAAACGAAAAGGAAGTCCACCGAAAACCGATTCGAGGGGCTACA
TCCACAGGGCGATTGTTATTCTTCGGTACTTACCAATTGAACGCATCTAC
TGTGGTGGATGTTGTTCAACAAATCACTGCGGACTCAGGAGTGAATGCCT
TCCTTCGTGCATCACATGAAAATCTTGAAGCAGTGACAGCAAGCTTTGCT
ACAAATGATGTCGATGCAGATAGTTTGCTTCCACCGGATATTGGAAGTTA
TGGCACCTTTGATATCAATTTTGACAACGTAATCGAACAACGGGTTGGAC
TTAATGGCTTTTATGGAGCTCGGCCAGGAATAGTCGTGGAGGCGCGGTTA
GGAGATATCAGTCTAGTTGGCATGTATACTGCTACCCTGGGTCTGGAAGC
GTCACTGCAAATGAAATCTCCACCGTTTTTCCCTCTACCGTACGACGGTA
GAAGAGCCAAAGGTCCTTGTCAAGAATGCCACAGGCTTGAAGGCAGAGCG
TCTGTTGTGGGAAAGGATCTACAATACCGCATATTTGAAAACGGTGTGCT
TGAGAAGCACAAAGTCACGGACAGAACGCTTTTCGAAAAAGAATTATCGA
CTGTCTGTGCCTTTGCTCAGGTATGTTCTTCGTAG
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Coding sequence (CDS) from alignment at tig00000212_pilon:533239..534723+

>Gchil357.t1 ID=Gchil357.t1|Name=Gchil357.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=1485bp|location=Sequence derived from alignment at tig00000212_pilon:533239..534723+ (Gracilaria chilensis NLEC103_M9 male)
ATGCTTTTTCTTGCCAAAACCCTAGTCGCTGCATTCGTGCTCTTTGCTGT
TTGTGCCCAAGCCATCACACATCTTCACAAAGGGCCTCAAAGTGATGAAG
AAGAATTCGTTCTGCGCGGATTTAGCCATGGCTCTTCAATGTCCACCGCT
CGCCCTATCGATGCAGACTTCGAAAGACTATCCGACCACACAGTCCACTT
TGCTGTTGATCTAAAAATGGATGCTGTTCTATGGGAAGAATTAGAAGATG
ATAATACTATGATGTACTGCATGCGACATGGAGATGATCGCTACGCTACG
ATTGAGCTCACCGGGGAGTCTCTCGACAGGGAAGACTACAGCCCGGGTTC
AGCTTTTGTAATTGATGCACGACGTTGGACACAGCTTTGCGGTTCTATTC
CTTCTCTTGATGGTATTAATCGTCTCGATCCTGTACTGTTTTTTAAGATG
AACAATGTGACCTTTTTGGATTCAATCCAAAAAATTCGTTTGTCTTTACA
AGCCATATCCGGGTCCGTCGTGGCGCCGTCAATTCGCTTTGATGTTCTGC
AAAGGCCTTTGAAGCATCATACCAAAAGGAGGTATGTGCTGCAGGATAGG
CCGCTGTACGAATCCACTTCCAGAATGTTGGAAGCACCCATCGGTTCTCT
TCCGGGCGGTGAATCGCACAGTGGATCAGAAGTGTTTTCAGAGTTTGCCC
TTTTCCCTGGGGCAAACATTTCAGTTTCAGGCGAAGTGGAAGGCACAATC
AACAACGTCAGAATAACCCGCTTGTTCAATTTGGAGGTAGGATGGGAGCA
ACGCCTGAGAGCTAATATTTCGTCAAGATTGGTTGCATCACGAACCTATA
GTGCCTCAAACGAAAAGGAAGTCCACCGAAAACCGATTCGAGGGGCTACA
TCCACAGGGCGATTGTTATTCTTCGGTACTTACCAATTGAACGCATCTAC
TGTGGTGGATGTTGTTCAACAAATCACTGCGGACTCAGGAGTGAATGCCT
TCCTTCGTGCATCACATGAAAATCTTGAAGCAGTGACAGCAAGCTTTGCT
ACAAATGATGTCGATGCAGATAGTTTGCTTCCACCGGATATTGGAAGTTA
TGGCACCTTTGATATCAATTTTGACAACGTAATCGAACAACGGGTTGGAC
TTAATGGCTTTTATGGAGCTCGGCCAGGAATAGTCGTGGAGGCGCGGTTA
GGAGATATCAGTCTAGTTGGCATGTATACTGCTACCCTGGGTCTGGAAGC
GTCACTGCAAATGAAATCTCCACCGTTTTTCCCTCTACCGTACGACGGTA
GAAGAGCCAAAGGTCCTTGTCAAGAATGCCACAGGCTTGAAGGCAGAGCG
TCTGTTGTGGGAAAGGATCTACAATACCGCATATTTGAAAACGGTGTGCT
TGAGAAGCACAAAGTCACGGACAGAACGCTTTTCGAAAAAGAATTATCGA
CTGTCTGTGCCTTTGCTCAGGTATGTTCTTCGTAG
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