Gchil6360.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6360.t1
Unique NameGchil6360.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length269
Homology
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BLAST of Gchil6360.t1 vs. uniprot
Match: A0A2V3J1H5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1H5_9FLOR)

HSP 1 Score: 196 bits (497), Expect = 1.020e-58
Identity = 100/179 (55.87%), Postives = 129/179 (72.07%), Query Frame = 0 
Query:   41 YRDDTDILMGLPKQPDRAARIELSLILENLELNETVNDILIRCMSSNTGTNETSWGAYRVDRFTPSQVQVQYFCIVSETQSLLFPEVVDSYINSGNLLRCLQEAREDIPRGVDIISGRTVAAPRSGSIVSAAGSTPGWAAGVALGVVAAIGGVALIAVLLKGEDVYLEAEYADFESDFQ 219
            + D+ + L  LP+QP+RA RI  SLILEN+   E VN  L+ CMSS T T +++WGAY++DRFTPSQ+QVQYF +VSE +SL FPE ++ YI SG LL C ++        V I+SGR V APRSGSIVS+AGSTPGWA GV  GVVA++G +ALI  ++KGE +Y E+EY +F  D Q
Sbjct:   10 FEDNREALQSLPEQPNRAVRIVFSLILENIGFTEKVNAGLVECMSSETNTTQSTWGAYQMDRFTPSQIQVQYFSLVSEQESLDFPERLNRYIESGKLLWCFRDVNRGTSEDVMILSGRKVTAPRSGSIVSSAGSTPGWAIGVVFGVVASVGILALIVTVIKGEQIYPESEYEEFGKDMQ 188
The following BLAST results are available for this feature:
BLAST of Gchil6360.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J1H5_9FLOR1.020e-5855.87Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 232..268
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 178..200
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..177
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 201..268
NoneNo IPR availableTMHMMTMhelixcoord: 178..200

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000196_piloncontigtig00000196_pilon:260070..260876 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6360.t1Gchil6360.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000196_pilon 260070..260876 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6360.t1 ID=Gchil6360.t1|Name=Gchil6360.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=269bp
MTDSFFLVLFIFIVTSHSQPLQLLPSHDKFSLKRGQPQRKYRDDTDILMG
LPKQPDRAARIELSLILENLELNETVNDILIRCMSSNTGTNETSWGAYRV
DRFTPSQVQVQYFCIVSETQSLLFPEVVDSYINSGNLLRCLQEAREDIPR
GVDIISGRTVAAPRSGSIVSAAGSTPGWAAGVALGVVAAIGGVALIAVLL
KGEDVYLEAEYADFESDFQDEQDLESCSDRMAMTVKDHDGRASKEVPGNN
GVGRKSNDIDGQSEDEGE*
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