Gchil7587.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7587.t1
Unique NameGchil7587.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length161
Homology
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BLAST of Gchil7587.t1 vs. uniprot
Match: A0A2V3IDR6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDR6_9FLOR)

HSP 1 Score: 116 bits (291), Expect = 7.210e-30
Identity = 79/159 (49.69%), Postives = 98/159 (61.64%), Query Frame = 0 
Query:    2 RGDSEFVKRRRTYRDEMHLLRMRFSGESETEQETARARSDVQATDLTEHKNERKARKRERSLQRIKEHKERLRQVQEEKKERVAFKKNVWEEKQKKLVEKGESVVQLLVSEAPHWITDDTLNKHVEQAVDEFFIEGVADARRDEEALRVNGEVRGAMVA 160
            RGDSEFVKRRR YRDEMH +R+RF+      ++T    S     D  E +  R AR++ER  QRIK            K++R AFKK  WE +QK L E+ ESV+ +LV  A  W+T+D L+ HVE+AVDEFFIEGVADARR+ EA    G V  A  A
Sbjct:   35 RGDSEFVKRRRAYRDEMHEMRIRFATNVGALKDTTGTASSSIEADPKELQERRIAREQERK-QRIKXXXXXXXXXXXMKQKRKAFKKAEWERRQKALFEQRESVINMLVEHADTWVTEDNLDNHVERAVDEFFIEGVADARRNSEAQLSGGPVHTAASA 192
The following BLAST results are available for this feature:
BLAST of Gchil7587.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IDR6_9FLOR7.210e-3049.69Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 52..83
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 23..65
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 23..56
IPR02614028S ribosomal protein S26PFAMPF14943MRP-S26coord: 6..132
e-value: 2.3E-8
score: 34.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000007_piloncontigtig00000007_pilon:2101576..2102152 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7587.t1Gchil7587.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000007_pilon 2101576..2102152 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7587.t1 ID=Gchil7587.t1|Name=Gchil7587.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=161bp
MRGDSEFVKRRRTYRDEMHLLRMRFSGESETEQETARARSDVQATDLTEH
KNERKARKRERSLQRIKEHKERLRQVQEEKKERVAFKKNVWEEKQKKLVE
KGESVVQLLVSEAPHWITDDTLNKHVEQAVDEFFIEGVADARRDEEALRV
NGEVRGAMVA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026140MRPS26