Gchil6364.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6364.t1
Unique NameGchil6364.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length292
Homology
BLAST of Gchil6364.t1 vs. uniprot
Match: A0A2V3J1R2_9FLOR (Ribosomal protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1R2_9FLOR)

HSP 1 Score: 399 bits (1026), Expect = 8.640e-138
Identity = 199/293 (67.92%), Postives = 238/293 (81.23%), Query Frame = 0
Query:    1 MLASVRYLLGRTLPPVRVPYHLNYATLRSVPRPEGDTE---RPLSRWRRLKRERRAAPTPANRTKQPYDRSAEYDLSTALSHVRASQWAKFDESLELVLRLNIDPRHADHNLRGVIRLPHGTGRNEKVAVIAEDDVAERAIAAGADLVGADELIDKIANEKGKTLKGFAACISVPHLFDKVAAKLGRILGPKGLLPSPKTNTVTDNVEKILEEIKRGRLCYRTDKAGNMHLHVGKMSFPDDALVENTVEAVRGILAVKPPSLKGKYLLNAIVCSSMGPSVKLDRQKLMQRVVE 290
            MLAS+R    R     R+ +   YATL     P+  +E   +PLSRW+RLKRERRAAPTP NRTK  +DR   YDL TAL HVRA+QWA+FDE+LELVLRL IDPRHADHNLRGVIRLPHGTGR +KVAV+A D+ A +AIAAGADLVG +ELIDKI  EKG+ +KGF AC++VP LF KVAA+LG+ILGPKGL+PSPKT TVTD++E I++E+KRGRL YRTDKAGNMHLHVGK+SFPDDAL+ENT+ A+RGIL V+P S+KGKY+L AI+CSSMGPSV LD Q L ++ +E
Sbjct:    1 MLASLRSHFARPPALHRLAHSFRYATLTKTAPPDPSSEASNQPLSRWQRLKRERRAAPTPLNRTKHQFDRQEAYDLHTALKHVRAAQWAQFDETLELVLRLKIDPRHADHNLRGVIRLPHGTGRVQKVAVLASDEQARQAIAAGADLVGGEELIDKIVKEKGRPIKGFEACVAVPRLFGKVAARLGKILGPKGLMPSPKTETVTDDIENIIKEVKRGRLSYRTDKAGNMHLHVGKLSFPDDALIENTLAAMRGILEVRPASVKGKYVLKAIMCSSMGPSVNLDHQLLTRKALE 293          
BLAST of Gchil6364.t1 vs. uniprot
Match: R7QM01_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QM01_CHOCR)

HSP 1 Score: 268 bits (686), Expect = 5.340e-86
Identity = 138/247 (55.87%), Postives = 179/247 (72.47%), Query Frame = 0
Query:   42 SRWRRLKRERRAAPTPANRTKQPYDRSAEYDLSTALSHVRASQWAKFDESLELVLRLNIDPRHADHNLRGVIRLPHGTGRNEKVAVIAEDDVAERAIAAGADLVGADELIDKIANEKGKTLKGFAACISVPHLFDKVAAKLGRILGPKGLLPSPKTNTVTDNVEKILEEIKRGRLCYRTDKAGNMHLHVGKMSFPDDALVENTVEAVRGILAVKPPSLKGKYLLNAIVCSSMGPSVKLDRQKLMQRV 288
            SRW+RLKR+RRA  TPANRT   +DR+A   L  AL+HVRA+ WA FDESLELVLRLNIDPR A  N+RG   LPHGTGR  +VA  AE   A+ A AAGAD VGAD+L+ +IA ++ K+LKGF AC++VP L   VAA++G +LGPKGL+P+ K  TV  +V +I+  +K G++ +RTD+AGN+HL VGK+SF D  L++N   A   I+  +P ++K KYL  A +CSSMGPSVKLD  +L + V
Sbjct:   55 SRWQRLKRKRRAERTPANRTAYRFDRAAPAPLPAALAHVRAAAWAAFDESLELVLRLNIDPRKAAENIRGAALLPHGTGRPARVAAFAEGIDADAARAAGADRVGADDLVAQIAADRAKSLKGFHACVAVPELLPTVAARVGMLLGPKGLMPAKKDGTVGPDVAQIVTRLKSGQIRFRTDRAGNVHLIVGKLSFADHLLIDNVCAATAAIMDARPHTVKKKYLEKAFLCSSMGPSVKLDLVQLARAV 301          
BLAST of Gchil6364.t1 vs. uniprot
Match: RL1_AQUAE (50S ribosomal protein L1 n=3 Tax=Aquifex TaxID=2713 RepID=RL1_AQUAE)

HSP 1 Score: 205 bits (522), Expect = 4.110e-62
Identity = 106/228 (46.49%), Postives = 154/228 (67.54%), Query Frame = 0
Query:   66 DRSAEYDLSTALSHVRASQWA---KFDESLELVLRLNIDPRHADHNLRGVIRLPHGTGRNEKVAVIAEDDVAERAIAAGADLVGADELIDKIANEKGKTLKGFAACISVPHLFDKVAAKLGRILGPKGLLPSPKTNTVTDNVEKILEEIKRGRLCYRTDKAGNMHLHVGKMSFPDDALVENTVEAVRGILAVKPPSLKGKYLLNAIVCSSMGPSVKLDRQKLMQRVVE 290
            DR+  Y L  A+  ++  +     +FDE++EL +RLN+DPR+AD  +RG + LPHG G+  KV V AE + A++A  AGAD VG DELI+KI  E+      F   I+ P +  KVA KLGRILGP+GL+PSPKT TVT NVE+ +++ KRGR+ ++ DKAGN+H+ VGK+SF  + L++N   A+  ++  KPP  KG+Y+ N  V  +M PSVKLD  ++++++ E
Sbjct:   16 DRNKRYTLEEAVDLLKKMEEVLQRRFDETVELAMRLNVDPRYADQMVRGSVVLPHGLGKPIKVVVFAEGEYAKKAEEAGADYVGGDELINKILKEEWTD---FDVAIATPEMMPKVA-KLGRILGPRGLMPSPKTGTVTTNVEQAIKDAKRGRVEFKVDKAGNVHMPVGKISFEKEKLIDNLYAAIDAVVRAKPPGAKGQYIKNMAVSLTMSPSVKLDINEVLKKLQE 239          
BLAST of Gchil6364.t1 vs. uniprot
Match: A0A7X7Y798_9FIRM (50S ribosomal protein L1 n=1 Tax=Bacilli bacterium TaxID=1903720 RepID=A0A7X7Y798_9FIRM)

HSP 1 Score: 203 bits (516), Expect = 2.410e-61
Identity = 99/215 (46.05%), Postives = 145/215 (67.44%), Query Frame = 0
Query:   66 DRSAEYDLSTALSHVRASQWAKFDESLELVLRLNIDPRHADHNLRGVIRLPHGTGRNEKVAVIAEDDVAERAIAAGADLVGADELIDKIANEKGKTLKGFAACISVPHLFDKVAAKLGRILGPKGLLPSPKTNTVTDNVEKILEEIKRGRLCYRTDKAGNMHLHVGKMSFPDDALVENTVEAVRGILAVKPPSLKGKYLLNAIVCSSMGPSVKLD 280
            DRS  YD+  A+  V+ +  A FDE++E+  RL +DP+HAD N+R  + LPHGTG+ ++V V A+ +  + A AAGAD +G +E I KI +        F   ++ P +  +V  KLGR+LGPKGL+P+PKT TVT ++EK ++EIK G++ +R DK+GN+H+ VGK+SF DD L+EN    +  I+ VKP + KGKY+ N  + S+MGP +KLD
Sbjct:   17 DRSKSYDIREAVQLVKKTATANFDETVEIAFRLGVDPKHADQNIRSAVVLPHGTGKTQRVLVFAKGEKVKEAEAAGADYIGDEETIQKINDG----WFDFDVVVATPDMMAEVG-KLGRVLGPKGLMPNPKTGTVTFDIEKAVKEIKAGKVEFRVDKSGNIHVPVGKVSFEDDQLIENIETMIETIIRVKPQTSKGKYIRNVSISSTMGPGIKLD 226          
BLAST of Gchil6364.t1 vs. uniprot
Match: A0A660RB96_9THEM (50S ribosomal protein L1 n=3 Tax=Thermotogae TaxID=200918 RepID=A0A660RB96_9THEM)

HSP 1 Score: 201 bits (512), Expect = 1.060e-60
Identity = 103/222 (46.40%), Postives = 148/222 (66.67%), Query Frame = 0
Query:   66 DRSAEYDLSTALSHVRASQWAKFDESLELVLRLNIDPRHADHNLRGVIRLPHGTGRNEKVAVIAEDDVAERAIAAGADLVGADELIDKIANEKGKTLKGFAACISVPHLFDKVAAKLGRILGPKGLLPSPKTNTVTDNVEKILEEIKRGRLCYRTDKAGNMHLHVGKMSFPDDALVENTVEAVRGILAVKPPSLKGKYLLNAIVCSSMGPSVKLDRQKLMQR 287
            DR   YD+  A+  V+ +  AKFDE++EL L  +ID R  D ++RG I LPHGTG+  KV V A+ D A+ A  AGAD VGA++L++KI  E       F   I+ P +  +V  +LG+ILGP+GL+PSPK+ TVT  V + ++E K+GR+  RTDK GN+H+ +GK SF DD L EN + A+  I+A+KP  +KG+++  A+V S+MGP +KLD  KL+ +
Sbjct:   16 DRMKYYDVDEAIDLVKKTATAKFDETIELHLATSIDYRKPDQHVRGTISLPHGTGKKVKVLVFAKGDKAKEAQEAGADYVGAEDLVEKIEKEG---FLDFDVAIATPDMM-RVIGRLGKILGPRGLMPSPKSGTVTQEVGETVKEFKKGRVEVRTDKTGNLHIPIGKRSFTDDQLKENLLSAIEQIMAMKPSGVKGQFIRKAVVASTMGPGIKLDLGKLLSK 233          
BLAST of Gchil6364.t1 vs. uniprot
Match: A0A354FEP7_9FIRM (50S ribosomal protein L1 n=2 Tax=Peptococcaceae bacterium TaxID=2052179 RepID=A0A354FEP7_9FIRM)

HSP 1 Score: 201 bits (511), Expect = 1.370e-60
Identity = 104/218 (47.71%), Postives = 148/218 (67.89%), Query Frame = 0
Query:   66 DRSAEYDLSTALSHVRASQWAKFDESLELVLRLNIDPRHADHNLRGVIRLPHGTGRNEKVAVIAEDDVAERAIAAGADLVGADELIDKIANEKGKTLKGFAACISVPHLFDKVAAKLGRILGPKGLLPSPKTNTVTDNVEKILEEIKRGRLCYRTDKAGNMHLHVGKMSFPDDALVENTVEAVRGILAVKPPSLKGKYLLNAIVCSSMGPSVKLDRQK 283
            DR   YDL  A++ V+ +  AKFDE+LEL +RL IDPRHAD  +RG + LPHGTG++  V V A+ D A+ A  AGAD VG DEL+ KI  ++G     F   ++ P +  KV  +LG+ILGP+GL+P+PKT TVT+++E+ ++EIK G++ YR DKAG +H  +GK SFP + L EN    V  ++ VKP + KG+Y+ + +V S+MGP VK++  K
Sbjct:   16 DREKLYDLDEAMALVKDNATAKFDETLELSVRLGIDPRHADQQVRGAVVLPHGTGKSRTVVVFAKGDKAKEATEAGADYVGEDELVQKI--QEGWL--DFEVAVATPDMMSKVG-RLGKILGPRGLMPNPKTGTVTNDIEQAVKEIKAGKIEYRADKAGIVHAIIGKASFPLEKLKENYTTLVGTLIKVKPSAAKGQYMKSIVVSSTMGPGVKINPLK 228          
BLAST of Gchil6364.t1 vs. uniprot
Match: H9UCM6_FERPD (50S ribosomal protein L1 n=4 Tax=Fervidobacterium TaxID=2422 RepID=H9UCM6_FERPD)

HSP 1 Score: 201 bits (511), Expect = 1.500e-60
Identity = 104/222 (46.85%), Postives = 144/222 (64.86%), Query Frame = 0
Query:   59 NRTKQPYDRSAEYDLSTALSHVRASQWAKFDESLELVLRLNIDPRHADHNLRGVIRLPHGTGRNEKVAVIAEDDVAERAIAAGADLVGADELIDKIANEKGKTLKGFAACISVPHLFDKVAAKLGRILGPKGLLPSPKTNTVTDNVEKILEEIKRGRLCYRTDKAGNMHLHVGKMSFPDDALVENTVEAVRGILAVKPPSLKGKYLLNAIVCSSMGPSVKLD 280
            N  ++  DR   Y L  A+  V+ +  AKFDE++EL ++ NID R ++ N+R  I LPHGTG+  +V V A+ D AE A  AGAD VGA+EL DKIANE       F   I+ P +  KV  KLG++LGP+GL+P+PKT TVTD+V   + E K+G++  RTDK GN+H+ VGK SF  + L EN   A   ILA++P  +KG ++  A++ S+MGP +KLD
Sbjct:    9 NEVRKLVDREKSYPLDEAVELVKKTATAKFDETVELHVKTNIDYRKSEQNIRSTISLPHGTGKTVRVLVFAKGDKAEEAKQAGADYVGAEELADKIANEG---FFDFDVAIATPDMM-KVIGKLGKVLGPRGLMPNPKTGTVTDDVASAVSEFKKGKVEVRTDKTGNIHIPVGKASFDSEKLKENIKSAYEQILALRPAGVKGNFIKKAVIASTMGPGIKLD 226          
BLAST of Gchil6364.t1 vs. uniprot
Match: A0A556PGN1_9BACI (50S ribosomal protein L1 n=2 Tax=Allobacillus TaxID=1400133 RepID=A0A556PGN1_9BACI)

HSP 1 Score: 200 bits (509), Expect = 2.660e-60
Identity = 102/215 (47.44%), Postives = 141/215 (65.58%), Query Frame = 0
Query:   66 DRSAEYDLSTALSHVRASQWAKFDESLELVLRLNIDPRHADHNLRGVIRLPHGTGRNEKVAVIAEDDVAERAIAAGADLVGADELIDKIANEKGKTLKGFAACISVPHLFDKVAAKLGRILGPKGLLPSPKTNTVTDNVEKILEEIKRGRLCYRTDKAGNMHLHVGKMSFPDDALVENTVEAVRGILAVKPPSLKGKYLLNAIVCSSMGPSVKLD 280
            DRS  YD   A+  V+ +  AKFDE++E   RL +DP+ AD  +RG + LPHGTG+ ++V V A+ D A+ A AAGAD VG  E I KI     +    F   ++ P +  +V  KLGR+LGPKGL+P+PKT TVT  VEK ++EIK G++ YR DKAGN+H+ +GK+SF D+ LVEN       ++  KP + KGKY+ NA + S+MGP V++D
Sbjct:   16 DRSKSYDSKEAIELVKKASTAKFDETVEAAFRLGVDPKKADQQIRGAMVLPHGTGKTQRVLVFAKGDKAKEAEAAGADYVGDQEYISKI----NEGWFDFDVIVATPDMMAEVG-KLGRVLGPKGLMPNPKTGTVTFEVEKAVQEIKAGKVEYRVDKAGNIHVPIGKVSFEDNQLVENFAAITETLVKAKPQASKGKYMRNAAISSTMGPGVRVD 225          
BLAST of Gchil6364.t1 vs. uniprot
Match: R9LMB8_9FIRM (50S ribosomal protein L1 n=3 Tax=Firmicutes TaxID=1239 RepID=R9LMB8_9FIRM)

HSP 1 Score: 200 bits (508), Expect = 3.420e-60
Identity = 101/218 (46.33%), Postives = 147/218 (67.43%), Query Frame = 0
Query:   66 DRSAEYDLSTALSHVRASQWAKFDESLELVLRLNIDPRHADHNLRGVIRLPHGTGRNEKVAVIAEDDVAERAIAAGADLVGADELIDKIANEKGKTLKGFAACISVPHLFDKVAAKLGRILGPKGLLPSPKTNTVTDNVEKILEEIKRGRLCYRTDKAGNMHLHVGKMSFPDDALVENTVEAVRGILAVKPPSLKGKYLLNAIVCSSMGPSVKLDRQK 283
            DR   Y +  A++  + +  AKFDE++E+   LN+DPRHAD  +RG + LP+GTG+ +KVAV+AE D A+ A AAGAD VGADELI KI   +G     F   I+ P++  K+  +LGR+LGPKGL+P+PKT TVT +V   + E+K+G++ YR DK GN+++ +GK+SF DD LVEN       IL  +P  +KG Y+ N ++ ++MGP + ++ QK
Sbjct:   16 DRDRLYSVEEAVALAKQAATAKFDETVEVSFNLNVDPRHADQQIRGAMVLPNGTGKTQKVAVVAEGDKAKEAEAAGADFVGADELIQKI---QGGWFD-FDVLIATPNMMGKLG-RLGRVLGPKGLMPNPKTGTVTMDVANAVNEVKKGKITYRVDKEGNINVLIGKVSFDDDKLVENFRALYNVILKARPTKVKGTYIKNLVISTTMGPGIHVEGQK 228          
BLAST of Gchil6364.t1 vs. uniprot
Match: A0A7V0IGL9_9BACT (50S ribosomal protein L1 n=1 Tax=candidate division Zixibacteria bacterium TaxID=2053527 RepID=A0A7V0IGL9_9BACT)

HSP 1 Score: 199 bits (507), Expect = 3.540e-60
Identity = 102/216 (47.22%), Postives = 145/216 (67.13%), Query Frame = 0
Query:   65 YDRSAEYDLSTALSHVRASQWAKFDESLELVLRLNIDPRHADHNLRGVIRLPHGTGRNEKVAVIAEDDVAERAIAAGADLVGADELIDKIANEKGKTLKGFAACISVPHLFDKVAAKLGRILGPKGLLPSPKTNTVTDNVEKILEEIKRGRLCYRTDKAGNMHLHVGKMSFPDDALVENTVEAVRGILAVKPPSLKGKYLLNAIVCSSMGPSVKLD 280
            YDR   Y L  AL  V+   +AKFDE++++ +RLN+DPRHAD  +RG + LPHGTG+  +V V A+ D A+ A  AGAD VGA++LI+KI  + G T   F   I+ P +   V  +LG+ILGP+GL+P+PK  TVT +V K ++E K G++ +R DKAGN+H  +GK+SF  D L EN +  V  I+  +P S+KG+Y+ N  V S+MGP V++D
Sbjct:    1 YDRLKPYPLREALELVKKMAYAKFDETVDMAIRLNVDPRHADQMVRGTVVLPHGTGKTVRVLVFAKGDKAKEAEEAGADFVGAEDLIEKI--QGGWT--DFDVAIATPDMMPMVG-RLGKILGPRGLMPNPKVGTVTQDVAKAVKEAKAGKIQFRVDKAGNIHAPIGKVSFDVDKLTENAMTLVDAIVKARPASVKGQYVKNITVSSTMGPGVRVD 211          
The following BLAST results are available for this feature:
BLAST of Gchil6364.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J1R2_9FLOR8.640e-13867.92Ribosomal protein n=1 Tax=Gracilariopsis chorda Ta... [more]
R7QM01_CHOCR5.340e-8655.87Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
RL1_AQUAE4.110e-6246.4950S ribosomal protein L1 n=3 Tax=Aquifex TaxID=271... [more]
A0A7X7Y798_9FIRM2.410e-6146.0550S ribosomal protein L1 n=1 Tax=Bacilli bacterium... [more]
A0A660RB96_9THEM1.060e-6046.4050S ribosomal protein L1 n=3 Tax=Thermotogae TaxID... [more]
A0A354FEP7_9FIRM1.370e-6047.7150S ribosomal protein L1 n=2 Tax=Peptococcaceae ba... [more]
H9UCM6_FERPD1.500e-6046.8550S ribosomal protein L1 n=4 Tax=Fervidobacterium ... [more]
A0A556PGN1_9BACI2.660e-6047.4450S ribosomal protein L1 n=2 Tax=Allobacillus TaxI... [more]
R9LMB8_9FIRM3.420e-6046.3350S ribosomal protein L1 n=3 Tax=Firmicutes TaxID=... [more]
A0A7V0IGL9_9BACT3.540e-6047.2250S ribosomal protein L1 n=1 Tax=candidate divisio... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR028364Ribosomal protein L1/ribosomal biogenesis proteinPFAMPF00687Ribosomal_L1coord: 85..275
e-value: 7.0E-39
score: 133.7
IPR028364Ribosomal protein L1/ribosomal biogenesis proteinCDDcd00403Ribosomal_L1coord: 86..279
e-value: 2.99277E-61
score: 191.243
IPR005878Ribosomal protein L1, bacterial-typeTIGRFAMTIGR01169TIGR01169coord: 62..283
e-value: 1.4E-71
score: 238.5
IPR005878Ribosomal protein L1, bacterial-typeHAMAPMF_01318_BRibosomal_L1_Bcoord: 45..284
score: 33.589211
IPR016095Ribosomal protein L1, 3-layer alpha/beta-sandwichGENE3D3.40.50.790coord: 118..214
e-value: 8.1E-68
score: 230.0
NoneNo IPR availableGENE3D3.30.190.20coord: 71..280
e-value: 8.1E-68
score: 230.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 33..64
NoneNo IPR availablePANTHERPTHR3642754S RIBOSOMAL PROTEIN L1, MITOCHONDRIALcoord: 53..286
IPR023674Ribosomal protein L1-likeSUPERFAMILY56808Ribosomal protein L1coord: 62..280

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000196_piloncontigtig00000196_pilon:287365..288240 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6364.t1Gchil6364.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000196_pilon 287365..288240 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6364.t1 ID=Gchil6364.t1|Name=Gchil6364.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=292bp
MLASVRYLLGRTLPPVRVPYHLNYATLRSVPRPEGDTERPLSRWRRLKRE
RRAAPTPANRTKQPYDRSAEYDLSTALSHVRASQWAKFDESLELVLRLNI
DPRHADHNLRGVIRLPHGTGRNEKVAVIAEDDVAERAIAAGADLVGADEL
IDKIANEKGKTLKGFAACISVPHLFDKVAAKLGRILGPKGLLPSPKTNTV
TDNVEKILEEIKRGRLCYRTDKAGNMHLHVGKMSFPDDALVENTVEAVRG
ILAVKPPSLKGKYLLNAIVCSSMGPSVKLDRQKLMQRVVEV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028364Ribosomal_L1/biogenesis
IPR005878Ribosom_L1_bac-type
IPR016095Ribosomal_L1_3-a/b-sand
IPR023674Ribosomal_L1-like