Gchil6328.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6328.t1
Unique NameGchil6328.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length304
Homology
BLAST of Gchil6328.t1 vs. uniprot
Match: A0A2V3J1M7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1M7_9FLOR)

HSP 1 Score: 217 bits (553), Expect = 3.630e-66
Identity = 117/234 (50.00%), Postives = 156/234 (66.67%), Query Frame = 0
Query:   69 SKTPT-QCILYDRPPRTASTTIGTALHSCLRKYGYSQPQQPSLEARTALVSHMLA-LPAHRKAILSRHLYLNATSVKLLRYNCHMILYISSCAPMKRRLWSAVKYTVAGGHGNASLSEQQMKKAFNIASRSDRQLQFLRAYPYVDNHKHPLHVYDPLIPDYVIRVHSLDQDLRKLLHAFGCNTTYVSGNIHQASQDEHALLDSLQVGKDTTYQRLMELANEKNERSLLKAAVFV 300
            S+TP+ +C +YDRPPRTASTTIGTAL SCLR++ + QP  P  + R+A+   +   L   RKA+LSRH YLN+ +V LLR  C  + YI+SCAP++ RL SA KYT++GGHGN++L +QQM  A   A+ S RQ +FL  YPYVD+ K P++V  PL+P+YVIR   L QDL KLL    C+T++VSGN+H+A  DE  +L  +  G DT YQ L   A   N   L +   F+
Sbjct:   42 SQTPSIRCFIYDRPPRTASTTIGTALQSCLRRHHFRQP--PREKQRSAIPYTIFDNLQTPRKALLSRHFYLNSRTVSLLRKRCSTLFYITSCAPIEERLLSASKYTLSGGHGNSTLDDQQMHAAAEKANSSTRQKRFLNHYPYVDDDKKPINVSTPLVPNYVIRKPHLRQDLTKLLQTLQCDTSFVSGNVHRAPADESQILQHITAGDDTLYQTLARRALSHNALGLQQLKQFI 273          
BLAST of Gchil6328.t1 vs. uniprot
Match: A0A2V3J4P6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4P6_9FLOR)

HSP 1 Score: 201 bits (512), Expect = 7.160e-60
Identity = 107/235 (45.53%), Postives = 148/235 (62.98%), Query Frame = 0
Query:   71 TPTQCILYDRPPRTASTTIGTALHSCLRKYGYSQPQQPSLEARTALVSHMLALPAHRKAILSRHLYLNATSVKLLRYNCHMILYISSCAPMKRRLWSAVKYTVAGGHGNASLSEQQMKKAFNIASRSDRQLQFLRAYPYVDNHKHPLH--VYDPLIPDYVIRVHSLDQDLRKLLHAFGCNTTYVSGNIHQASQDEHAL-LDSLQVGKDT-TYQRLMELANEKNERSLLKAAVFVK 301
            +P  C++YDRPPRTASTTIG AL  CL   GY QP    ++ R+ +V +ML LP  R ++L+RH Y+N+TS+  LR  C  + YI+S APMK RLWS VKY     HGN+SL+E Q+  A     +   Q++ L AYPY+  H+ P++    D + PDYVIR   L++D+ KLL AFGC T +VS NIH     EHA  LD + +  D   ++R++ LA ++N+  L KAA F +
Sbjct:   54 SPHTCVIYDRPPRTASTTIGNALEKCLEPLGYEQPDWQGMDGRSLMVLNMLRLPFERVSLLARHFYMNSTSLLELRTGCDALFYITSTAPMKERLWSLVKYRQVTKHGNSSLNETQLFAALQDLRKETVQIEVLNAYPYLQTHETPINRSTIDTITPDYVIRKSQLNEDMSKLLRAFGCETRFVSENIHLL---EHASGLDKITIDDDDGLHERMLRLARQRNDVGLKKAADFAR 285          
The following BLAST results are available for this feature:
BLAST of Gchil6328.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J1M7_9FLOR3.630e-6650.00Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J4P6_9FLOR7.160e-6045.53Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 37..303
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..36
NoneNo IPR availableTMHMMTMhelixcoord: 21..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000196_piloncontigtig00000196_pilon:126857..127768 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6328.t1Gchil6328.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000196_pilon 126857..127768 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6328.t1 ID=Gchil6328.t1|Name=Gchil6328.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=304bp
MSRPSPSLAWRRAQKVPKAPVYFAVTLTVTILLLVFRNRAATYSFIELIS
ISRGRISKPKSRSQPIVHSKTPTQCILYDRPPRTASTTIGTALHSCLRKY
GYSQPQQPSLEARTALVSHMLALPAHRKAILSRHLYLNATSVKLLRYNCH
MILYISSCAPMKRRLWSAVKYTVAGGHGNASLSEQQMKKAFNIASRSDRQ
LQFLRAYPYVDNHKHPLHVYDPLIPDYVIRVHSLDQDLRKLLHAFGCNTT
YVSGNIHQASQDEHALLDSLQVGKDTTYQRLMELANEKNERSLLKAAVFV
KET*
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