Gchil3388.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil3388.t1
Unique NameGchil3388.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length226
Homology
BLAST of Gchil3388.t1 vs. uniprot
Match: A0A2V3J3Y6_9FLOR (GTP-binding protein Rheb-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3Y6_9FLOR)

HSP 1 Score: 290 bits (743), Expect = 1.940e-96
Identity = 150/218 (68.81%), Postives = 174/218 (79.82%), Query Frame = 0
Query:   11 PPPSPRSPFCLRKRIAVLGARGVGKSAVVIQCTYGRFEPEYMPTCEDSFLWTTTVDGNRYEVTIVDADGQDEFPHFGHQYTIGVDGYILMFSVLHHGTFHIIKRVNEKLLDTLQVLNPKGTKELPRILVGNQIDDTKHRRVSREVAQRFADENDIPYYETSALTGENVQDVFVRLLRIMYANQYEFSESSA---NSPLQKSQPRLSRAEHKSNVCNVQ 225
            PPPS R+PF +RKRIAVLGAR VGKSAV IQC Y RFEPEYMPTCED+FLWTT VDG  YEVTIVD DGQDEFP FGHQYTIGVDGYILMFS+++  +F+IIKRV+EKLL+TL VLN KGTKELPRILVGNQ+D    RRVSR+ AQ+FADENDIPYYETSA T ENV++VFVR+LRI+ AN  +  + +    +S L+ +Q    R     N C+VQ
Sbjct:   43 PPPS-RTPFYVRKRIAVLGARAVGKSAVAIQCAYNRFEPEYMPTCEDAFLWTTVVDGTNYEVTIVDTDGQDEFPDFGHQYTIGVDGYILMFSLVNENSFYIIKRVHEKLLETLIVLNRKGTKELPRILVGNQLDVAHKRRVSRQAAQQFADENDIPYYETSAYTAENVREVFVRMLRIINANLLDLHKPAVPQIHSSLRHTQSESDRP----NFCSVQ 255          
BLAST of Gchil3388.t1 vs. uniprot
Match: A0A2V3IJT9_9FLOR (GTP-binding protein Rheb-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJT9_9FLOR)

HSP 1 Score: 278 bits (712), Expect = 1.070e-91
Identity = 145/216 (67.13%), Postives = 165/216 (76.39%), Query Frame = 0
Query:   11 PPPSPRSPFCLRKRIAVLGARGVGKSAVVIQCTYGRFEPEYMPTCEDSFLWTTTVDGNRYEVTIVDADGQDEFPHFGHQYTIGVDGYILMFSVLHHGTFHIIKRVNEKLLDTLQVLNPKGTKELPRILVGNQIDDTKHRRVSREVAQRFADENDIPYYETSALTGENVQDVFVRLLRIMYANQYEFSESSANSPLQKSQPRLSRAEHKS-NVCNVQ 225
            PPPS + PF +RKRIAVLGAR VGKSAV IQCT  RFEPEYMPTCED+FLWTTTVDG +YEVTIVD DGQDEFP FG QYTIGVDGYILMFS++   +FHII+RV+EKLL TL VL+PKGT ELPRILVGNQ+D    RRVSR+VAQ FADE+ IPYYETSA TGENV +VF  LLRI+  N     + S N      + R S     + N C++Q
Sbjct:   43 PPPS-QKPFRVRKRIAVLGARAVGKSAVAIQCTDNRFEPEYMPTCEDAFLWTTTVDGTKYEVTIVDTDGQDEFPDFGEQYTIGVDGYILMFSLVDESSFHIIRRVHEKLLQTLVVLDPKGTAELPRILVGNQLDMAHTRRVSRQVAQEFADEHGIPYYETSAYTGENVNEVFATLLRIINTNLVNSHKPSENELRPSCEQRESTTTANAPNYCSIQ 257          
BLAST of Gchil3388.t1 vs. uniprot
Match: R7QRP1_CHOCR (Rheb1 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QRP1_CHOCR)

HSP 1 Score: 177 bits (448), Expect = 8.960e-52
Identity = 90/175 (51.43%), Postives = 117/175 (66.86%), Query Frame = 0
Query:   18 PFCLRKRIAVLGARGVGKSAVVIQCTYGRFEPEYMPTCEDSFLWTTTVDGNRYEVTIVDADGQDEFPHFGHQYTIGVDGYILMFSVLHHGTFHIIKRVNEKLLDTLQVLNPKGTKELPRILVGNQIDDTKHRRVSREVAQRFADENDIPYYETSALTGENVQDVFVRLLRIMYAN 192
            PF + KRIAVLGARGVGKSA+ I+    RFEP YM T +D + W   V+  +Y+V+I+D DGQDE   FG +YT GVD Y+L+FSV    ++ +IK+VNEKLL TL V    GT E+PR+LVGNQID    R+V  + A +FA    IPY ETSA T +NV + F  +L ++  N
Sbjct:   41 PFYVFKRIAVLGARGVGKSALSIRVAQNRFEPNYMLTFQDMYQWRPVVNSVQYDVSILDTDGQDENSEFGMRYTTGVDAYVLVFSVRDESSYEVIKQVNEKLLVTLNVTERVGTSEVPRVLVGNQIDIAHQRQVPSQEAAKFASNEGIPYLETSAFTSQNVNEAFDSVLCMIQQN 215          
BLAST of Gchil3388.t1 vs. uniprot
Match: A0A7S2ZWW8_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZWW8_9RHOD)

HSP 1 Score: 145 bits (365), Expect = 6.270e-40
Identity = 77/165 (46.67%), Postives = 107/165 (64.85%), Query Frame = 0
Query:   23 KRIAVLGARGVGKSAVVIQCTYGRFEPEYMPTCEDSFLWTTTVDGNRYEVTIVDADGQDEFPHFGHQYTIGVDGYILMFSVLHHGTFHIIKRVNEKLLDTLQVLNPKGTKELPRILVGNQIDDTKHRRVSREVAQRFADENDIPYYETSALTGENVQDVFVRLLR 187
            +++AV+G + VGKS+++++     FE  Y PT ED FL +T VDG  +   ++D+ GQD+   +G Q TIG+ GY+++FSV    TF +I+ VN+ LL +L       T E+PR+LVGNQID    R+VS E AQ  A E  IPY E SAL+GE +QDVF  LLR
Sbjct:   23 RKLAVIGPKCVGKSSIILRFIENTFEEGYTPTIEDLFLVSTNVDGTAFNCELLDSAGQDDVSTYGAQLTIGIRGYLIVFSVRDRETFDLIRPVNQNLLVSL---GGPATHEVPRVLVGNQIDAAGERKVSTEEAQALARELRIPYMECSALSGEGIQDVFHSLLR 184          
BLAST of Gchil3388.t1 vs. uniprot
Match: A0A5J4YYB2_PORPP (GTP-binding protein Rheb-like n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YYB2_PORPP)

HSP 1 Score: 136 bits (342), Expect = 1.780e-36
Identity = 73/168 (43.45%), Postives = 105/168 (62.50%), Query Frame = 0
Query:   23 KRIAVLGARGVGKSAVVIQCTYGRFEPEYMPTCEDSFLWTTTVDGNRYEVTIVDADGQDEFPHFGHQYTIGVDGYILMFSVLHHGTFHIIKRVNEKLLDTLQVLNPKGTKELPRILVGNQIDDTK-HRRVSREVAQRFADENDIPYYETSALTGENVQDVFVRLLRIM 189
            +RIAVLGARGVGK+++  +     F+  Y+PT EDS+  T  ++  +Y   ++D  GQDE+  FG Q TIGV G+ L+FSV    +F ++K +N+KLL TL      G   +PR+LVGNQ D  +  R VS    + +A E   P+ E SA++GENV + FV L+R+M
Sbjct:   21 RRIAVLGARGVGKTSMSTRFCENTFDDMYLPTIEDSYQATIRINNQQYICEVLDTAGQDEYSIFGTQLTIGVHGFFLVFSVRDRTSFELLKTINDKLLVTL------GASSIPRVLVGNQSDSIETEREVSYAEGESYAREIGCPFVECSAMSGENVTEAFVTLIRVM 182          
BLAST of Gchil3388.t1 vs. uniprot
Match: A0A1X6NJZ5_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NJZ5_PORUM)

HSP 1 Score: 124 bits (311), Expect = 5.720e-32
Identity = 77/198 (38.89%), Postives = 108/198 (54.55%), Query Frame = 0
Query:   27 VLGARGVGKSAVVIQCTYGRFEPEYMPTCEDSFLWTTTVDGNRYEVTIVDADGQDEFPHFGHQYTIGVDGYILMFSVLHHGTFHIIKRVNEKLLDTLQVLNPKGTKELPRILVGNQIDDTKHRRVSREVAQRFADENDIPYYETSALTGENVQDVFVRLLRIMYANQYEFSESSANSPLQKSQPRLSRAEHKSNVCNV 224
            +LG   VGKSAV I+    +F   ++PT ED++  +  +DG RY   + D  GQDE   F  Q +IGV GY+L++SV    +F  I+ +N +LL TL      G    PR+LVGNQID    R+VS E  +  A E + P+ E SALTG+ V DVF  LLR +   Q   +E  A  P ++ QP+         +C +
Sbjct:    1 MLGPSVVGKSAVTIRFCENKFVAVHLPTIEDTYHASAELDGQRYACEVKDTAGQDELSLFAAQSSIGVHGYVLLYSVTDMASFEAIRTINLQLLSTL------GCNSTPRVLVGNQIDLEDLRKVSYEDGEDLAAELNCPFVECSALTGQGVTDVFHSLLRAI-DGQMMPAEEVAVEPEEEPQPQGQPPSQHHGLCTI 191          
BLAST of Gchil3388.t1 vs. uniprot
Match: M1UXT7_CYAM1 (Small GTP-binding protein of Ras family n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1UXT7_CYAM1)

HSP 1 Score: 126 bits (316), Expect = 2.690e-31
Identity = 73/165 (44.24%), Postives = 99/165 (60.00%), Query Frame = 0
Query:   23 KRIAVLGARGVGKSAVVIQCTYGRFEPEYMPTCEDSFLWTTTV-DGNRYEVTIVDADGQDEFPHFGHQYTIGVDGYILMFSVLHHGTFHIIKRVNEKLLDTLQVLNPKGTKELPRILVGNQIDDTKHRRVSREVAQRFADENDIPYYETSALTGENVQDVFVRLL 186
            +RIAVLGARGVGKSA+ I+   G F   Y+PT ED++  T    DG  Y + IVD  GQDE+   G Q TIG+DGY+L++SV    +F +++ + ++L+  L      G+ ++P ILVGNQID    R VS E     A+     + E SA TG NV +VF  LL
Sbjct:   49 RRIAVLGARGVGKSALTIRFCEGTFPESYLPTIEDTYQTTLRGRDGTVYALEIVDTAGQDEYSSLGAQATIGIDGYVLLYSVRDASSFEMVRYIFQRLVAIL------GSDQIPMILVGNQIDQALDREVSFEEGAHIAETIGAAFCECSARTGTNVAEVFRILL 207          
BLAST of Gchil3388.t1 vs. uniprot
Match: A0A7J7IRH7_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IRH7_9RHOD)

HSP 1 Score: 125 bits (315), Expect = 3.420e-31
Identity = 73/165 (44.24%), Postives = 101/165 (61.21%), Query Frame = 0
Query:   23 KRIAVLGARGVGKSAVVIQCTYGRFEPEYMPTCEDSFLWTTTV-DGNRYEVTIVDADGQDEFPHFGHQYTIGVDGYILMFSVLHHGTFHIIKRVNEKLLDTLQVLNPKGTKELPRILVGNQIDDTKHRRVSREVAQRFADENDIPYYETSALTGENVQDVFVRLL 186
            +RIAVLGARGVGKSA+ I+   G F   Y+PT ED++  T    D   Y + IVD  GQDE+   G Q TIG+DGY+L++SV    +F +I+ + ++L+ TL      G  ++P+ILVGNQID++  R V  E   + A+     + E SA TG NV +VF  LL
Sbjct:   49 RRIAVLGARGVGKSALTIRFCEGTFPESYLPTIEDTYQATLRGHDDEVYALEIVDTAGQDEYSSLGAQVTIGIDGYVLLYSVRDASSFEMIRYIYQRLVATL------GGDQIPKILVGNQIDESLDREVDYEEGIQVAESIGAAFCECSARTGTNVVEVFRILL 207          
BLAST of Gchil3388.t1 vs. uniprot
Match: A0A4W6FVG1_LATCA (GTP-binding protein Rheb-like n=17 Tax=Euacanthomorphacea TaxID=123369 RepID=A0A4W6FVG1_LATCA)

HSP 1 Score: 122 bits (305), Expect = 3.620e-31
Identity = 69/174 (39.66%), Postives = 104/174 (59.77%), Query Frame = 0
Query:   13 PSPRSPFCLRKRIAVLGARGVGKSAVVIQCTYGRFEPEYMPTCEDSFLWTTTVDGNRYEVTIVDADGQDEFPHFGHQYTIGVDGYILMFSVLHHGTFHIIKRVNEKLLDTLQVLNPKGTKELPRILVGNQIDDTKHRRVSREVAQRFADENDIPYYETSALTGENVQDVFVRLL 186
            P P+S     ++IAVLG R VGKS++ IQ   G+F   Y PT E++F  T TV+G  Y + +VD  GQDE+  F   YTI VDGYIL++SV  + +F +++ ++EKLLD +      G  ++P ILVGN+ D    R +S E  +  A+  +  + E+SA   +   +VF R++
Sbjct:    2 PQPKS-----RKIAVLGYRSVGKSSLTIQFVEGQFVDSYDPTIENTFTKTMTVNGQEYNLQLVDTAGQDEYSIFPQSYTIDVDGYILIYSVTSYKSFEVVRVIHEKLLDMV------GNVQVPIILVGNKKDLHMERVISFEEGKALAESWNAAFLESSAKENQTAVEVFRRMI 164          
BLAST of Gchil3388.t1 vs. uniprot
Match: A0A8J4Q0U8_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4Q0U8_9MYCE)

HSP 1 Score: 120 bits (302), Expect = 1.020e-30
Identity = 71/197 (36.04%), Postives = 105/197 (53.30%), Query Frame = 0
Query:   11 PPPSPRSPFCLRKRIAVLGARGVGKSAVVIQCTYGRFEPEYMPTCEDSFLWTTTVDGNRYEVTIVDADGQDEFPHFGHQYTIGVDGYILMFSVLHHGTFHIIKRVNEKLLDTLQVLNPKGTKELPRILVGNQIDDTKHRRVSREVAQRFADENDIPYYETSALTGENVQDVFVRLLRIMYANQYEFSESSANSPLQK 207
            PPP  R       +I V+G R VGKS + IQ         Y PT E+++       G  Y   I+D  GQDE+    ++Y+IG+ GYIL++SV    +   IK +N+K+L++L      GT+++PR+LVGN+ D    R +S+E AQ  A+E D  + E S    ENV++VF ++L        E  +S    P QK
Sbjct:    2 PPPKQR-------KICVMGFRAVGKSTITIQFVENHSPDTYNPTIENTYKKIIKHQGQEYATEIIDTAGQDEYSILNNKYSIGIHGYILVYSVASRSSLETIKALNDKILNSL------GTEKIPRVLVGNKSDLVNERVISKEEAQSLANEWDCAFVECSGKNNENVEEVFKQILN-------EVGKSQQTEPPQK 178          
The following BLAST results are available for this feature:
BLAST of Gchil3388.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J3Y6_9FLOR1.940e-9668.81GTP-binding protein Rheb-like n=1 Tax=Gracilariops... [more]
A0A2V3IJT9_9FLOR1.070e-9167.13GTP-binding protein Rheb-like n=1 Tax=Gracilariops... [more]
R7QRP1_CHOCR8.960e-5251.43Rheb1 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7... [more]
A0A7S2ZWW8_9RHOD6.270e-4046.67Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A5J4YYB2_PORPP1.780e-3643.45GTP-binding protein Rheb-like n=1 Tax=Porphyridium... [more]
A0A1X6NJZ5_PORUM5.720e-3238.89Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
M1UXT7_CYAM12.690e-3144.24Small GTP-binding protein of Ras family n=1 Tax=Cy... [more]
A0A7J7IRH7_9RHOD3.420e-3144.24Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]
A0A4W6FVG1_LATCA3.620e-3139.66GTP-binding protein Rheb-like n=17 Tax=Euacanthomo... [more]
A0A8J4Q0U8_9MYCE1.020e-3036.04Uncharacterized protein n=1 Tax=Polysphondylium vi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 167..189
score: 37.32
coord: 23..44
score: 32.63
coord: 63..85
score: 26.7
coord: 46..62
score: 28.63
coord: 132..145
score: 37.93
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 24..192
e-value: 5.0E-35
score: 132.4
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 24..192
e-value: 5.9E-12
score: 39.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 201..225
NoneNo IPR availablePROSITEPS51419RABcoord: 14..225
score: 17.454542
IPR001806Small GTPaseSMARTSM00174rho_sub_3coord: 25..192
e-value: 1.1E-4
score: -57.4
IPR001806Small GTPasePFAMPF00071Rascoord: 25..189
e-value: 6.3E-35
score: 120.2
IPR001806Small GTPasePROSITEPS51421RAScoord: 15..225
score: 15.640578
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 23..182
e-value: 3.2E-19
score: 67.2
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 20..197
e-value: 1.8E-44
score: 153.0
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 24..205
IPR020849Small GTPase, Ras-typePANTHERPTHR24070RAS, DI-RAS, AND RHEB FAMILY MEMBERS OF SMALL GTPASE SUPERFAMILYcoord: 24..219

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000168_piloncontigtig00000168_pilon:813054..813731 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil3388.t1Gchil3388.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000168_pilon 813054..813731 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil3388.t1 ID=Gchil3388.t1|Name=Gchil3388.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=226bp
MSQVDRPNREPPPSPRSPFCLRKRIAVLGARGVGKSAVVIQCTYGRFEPE
YMPTCEDSFLWTTTVDGNRYEVTIVDADGQDEFPHFGHQYTIGVDGYILM
FSVLHHGTFHIIKRVNEKLLDTLQVLNPKGTKELPRILVGNQIDDTKHRR
VSREVAQRFADENDIPYYETSALTGENVQDVFVRLLRIMYANQYEFSESS
ANSPLQKSQPRLSRAEHKSNVCNVQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR005225Small_GTP-bd_dom
IPR027417P-loop_NTPase
IPR020849Small_GTPase_Ras-type