Gchil3341.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil3341.t1
Unique NameGchil3341.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length650
Homology
BLAST of Gchil3341.t1 vs. uniprot
Match: A0A2V3IK38_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IK38_9FLOR)

HSP 1 Score: 493 bits (1269), Expect = 2.840e-163
Identity = 332/700 (47.43%), Postives = 423/700 (60.43%), Query Frame = 0
Query:    8 KRPTVLLAILSLVLVFCTHPVLSLKTTRYNSDGVSAS-----------------HSVFLRKLQLAQNKGDHI--LDNELNAQDSERQTEDSLANQGVGDAQSVPDTERDEEQKAKKPEDDDLSDVEAQIQEIAKRVGITEEELKQANVFKS----------DANNAA-------DHDAAKPGYHDSSEDERGKADEDPVKISDAR----DQTDRIESLHGD-----------------DIRKPAQAPPEMVAPGRPHLRKSEKKGTVEQPRASLGNSDEMTDSSMKSESSELVAQLDSYKKRLNSLLKSEQEARENERMVRLEADELQKKLASMKNEKRRVEQLAAERNADLGKLRESVPQIVKEAKDEEKAEIEEMKETIEEQKRAFDELFEEKQMLSKMLGDEQHKLDELQEKIQHPDLGLWVSQRAERAAILVEGPETDAIKYYASKYMAPKVTKVKHRLQMLENRVEQTVDHLLPEKYGSVVAMLLSIGLVGFPIFVTLSTVVSLTKGVSLRQYVLLGNIFLTSFAVGLCAAGLLLRQDPLQTLYEANSGMFILLQLCIGLGYPMFLGVLLLTVARCREKFDVLVFGCELLFYVVIGMNYRARVWRPTMLGENIDCGSMMYVVYTMDFFAMTALTVALSRPTQFGGFGGHDVEKGHGE-DIGERSGRASVSSKGIGSLGSGLMQLVAGGKQDEKAE 649
            KRP   L +L L L  C HPVL    +R +  G +                   H   L + +L Q + D    LD + + + ++  TE + + QGV  A  +P   RD+   A + +DD  ++V+AQI  IA+  GITEEEL + +V +           D N A+       DHDA       +   E+  A +D  +   A      +T   ++ + D                 D R+  QAPPEMVAPGRP+           QP   L   +E  ++S   + S L  + ++Y++R+ SL + EQ AR NER  +               EK   +   +E+  +  KLRES  + V EAK E++ E+EEMK  I        ELFEEKQ+LS+ML DEQ KL+ELQEKIQHPDLGLWV QRAERAAILVEGPETDA+KYYA KYMAPKVTK+KHRLQMLENRVE++VDHLLP KYG  VAMLLSIGL+GFP+FVTLST VSLTK  SLRQ+VL+GN+F T+FAVGLC AGL+LRQDPLQTLYEA+  +FILLQL + + YP FL V+   V R R+K DVLVFGCEL+FY VIGMNYR+RVWR  MLGE+ID G MMY VY +DF AM ALTV+ SR     G GGHDVE G  +  +   +GR + S++GI SLGSGL+QL  GGK+++K E
Sbjct:    5 KRPQGFL-VLFLFLFLCPHPVLC-SVSRDDDLGPATPPTHHIAIHEQTSINAFPHVARLYRRRLKQEQADDTDDLDKDQDTKGTDTLTEGAFSAQGVEHADGIPKPNRDDGDAAAEAKDD--AEVDAQIAAIARHAGITEEELNRVDVNQDTGRKLEDMVKDVNEASASSIYARDHDATDNLERSNRNAEQASARDDAAQDDGAARKAISKTSNADATNMDVGVGAKDRDGDAEASVKDARQADQAPPEMVAPGRPN-----------QPHV-LQAKNETKENSAGMDVSSLRTENENYRQRIKSLAEREQNARHNEREAKXXXXXXXXXXXXXXXEKTHADHFVSEQKLENRKLRESFSKSVDEAKVEKQEEMEEMKAAIXXXXXXXXELFEEKQLLSRMLSDEQRKLNELQEKIQHPDLGLWVRQRAERAAILVEGPETDAVKYYAQKYMAPKVTKMKHRLQMLENRVERSVDHLLPAKYGGFVAMLLSIGLIGFPVFVTLSTAVSLTKSFSLRQHVLVGNVFWTAFAVGLCVAGLVLRQDPLQTLYEASRSLFILLQLGMAVAYPAFLMVISCAVLRARDKVDVLVFGCELVFYAVIGMNYRSRVWRAAMLGEHIDTGPMMYAVYMVDFVAMMALTVSSSRTMGGSGMGGHDVEDGFEKLSVHSGAGRGAASARGIVSLGSGLVQLAVGGKREQKDE 688          
BLAST of Gchil3341.t1 vs. uniprot
Match: R7QQZ2_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQZ2_CHOCR)

HSP 1 Score: 375 bits (963), Expect = 3.560e-119
Identity = 195/319 (61.13%), Postives = 252/319 (79.00%), Query Frame = 0
Query:  331 IEEQKRAFDELFEEKQMLSKMLGDEQHKLDELQEKIQHPDLGLWVSQRAERAAILVEGPETDAIKYYASKYMAPKVTKVKHRLQMLENRVEQTVDHLLPEKYGSVVAMLLSIGLVGFPIFVTLSTVVSLTKGVSLRQYVLLGNIFLTSFAVGLCAAGLLLRQDPLQTLYEANSGMFILLQLCIGLGYPMFLGVLLLTVARCREKFDVLVFGCELLFYVVIGMNYRARVWRPTMLGENIDCGSMMYVVYTMDFFAMTALTVAL-----SRPTQFGGFGGHDVEK--GHGEDIGERSGRASVSSKGIGSLGSGLMQLVAGG 642
            IEE+KRAFDEL+EEKQ+L ++L +EQ  L +LQEKIQHPDLGLW+ QRAERAAILVE PETDA+K+YA KYMAPKVTK++HRL +LE RVE++VDHLLP +YGSVVA++L IGL+GFP+FVT+STVV++TK VSLRQYVLLGN+FLT+F+ GLC AG+LL+QDPLQTLYEA+  MF++LQL   + +P+F+GV+   V + R++ D+ VFGCEL+FY+++G+NYRARVWRP MLG NI+   MMYVVY +DF +MTALT++      SR   F G    DVE+    G +  + +G A   S  +G+LGSGLM+    G
Sbjct:  233 IEERKRAFDELYEEKQVLGQILDEEQKTLHDLQEKIQHPDLGLWIRQRAERAAILVETPETDAMKFYARKYMAPKVTKMRHRLALLEKRVEKSVDHLLPSQYGSVVALMLCIGLIGFPVFVTMSTVVTVTKSVSLRQYVLLGNVFLTAFSSGLCIAGILLQQDPLQTLYEASESMFVILQLAAAVVFPVFIGVIFCAVLKARDQEDLFVFGCELVFYILVGLNYRARVWRPAMLGRNIETSRMMYVVYVIDFLSMTALTISSAKVGQSRLPSFVGDSYVDVERDLSAGANKSDEAGGAGPRSS-LGALGSGLMKAAISG 550          
The following BLAST results are available for this feature:
BLAST of Gchil3341.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IK38_9FLOR2.840e-16347.43Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QQZ2_CHOCR3.560e-11961.13Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 313..365
NoneNo IPR availableCOILSCoilCoilcoord: 110..130
NoneNo IPR availableCOILSCoilCoilcoord: 246..301
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 91..111
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 220..243
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 137..243
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 149..193
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 64..114
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 74..89
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 468..490
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 574..592
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 529..534
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 432..456
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..10
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 505..528
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 31..431
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 457..467
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 11..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 23..30
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 555..573
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 535..554
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 491..504
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 593..649
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..30
NoneNo IPR availableTMHMMTMhelixcoord: 574..593
NoneNo IPR availableTMHMMTMhelixcoord: 469..491
NoneNo IPR availableTMHMMTMhelixcoord: 506..528
NoneNo IPR availableTMHMMTMhelixcoord: 12..29
NoneNo IPR availableTMHMMTMhelixcoord: 537..559
NoneNo IPR availableTMHMMTMhelixcoord: 435..457

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000168_piloncontigtig00000168_pilon:282357..284306 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil3341.t1Gchil3341.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000168_pilon 282357..284306 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil3341.t1 ID=Gchil3341.t1|Name=Gchil3341.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=650bp
MCSSNVFKRPTVLLAILSLVLVFCTHPVLSLKTTRYNSDGVSASHSVFLR
KLQLAQNKGDHILDNELNAQDSERQTEDSLANQGVGDAQSVPDTERDEEQ
KAKKPEDDDLSDVEAQIQEIAKRVGITEEELKQANVFKSDANNAADHDAA
KPGYHDSSEDERGKADEDPVKISDARDQTDRIESLHGDDIRKPAQAPPEM
VAPGRPHLRKSEKKGTVEQPRASLGNSDEMTDSSMKSESSELVAQLDSYK
KRLNSLLKSEQEARENERMVRLEADELQKKLASMKNEKRRVEQLAAERNA
DLGKLRESVPQIVKEAKDEEKAEIEEMKETIEEQKRAFDELFEEKQMLSK
MLGDEQHKLDELQEKIQHPDLGLWVSQRAERAAILVEGPETDAIKYYASK
YMAPKVTKVKHRLQMLENRVEQTVDHLLPEKYGSVVAMLLSIGLVGFPIF
VTLSTVVSLTKGVSLRQYVLLGNIFLTSFAVGLCAAGLLLRQDPLQTLYE
ANSGMFILLQLCIGLGYPMFLGVLLLTVARCREKFDVLVFGCELLFYVVI
GMNYRARVWRPTMLGENIDCGSMMYVVYTMDFFAMTALTVALSRPTQFGG
FGGHDVEKGHGEDIGERSGRASVSSKGIGSLGSGLMQLVAGGKQDEKAE*
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