Gchil3358.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil3358.t1
Unique NameGchil3358.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length474
Homology
BLAST of Gchil3358.t1 vs. uniprot
Match: A0A2V3IMI9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMI9_9FLOR)

HSP 1 Score: 402 bits (1033), Expect = 1.360e-130
Identity = 255/500 (51.00%), Postives = 315/500 (63.00%), Query Frame = 0
Query:    1 METPATRSRSR------QSGDARSTDVPQALAPTP-DSREIPGTGTEDPQPDS----GLTTVATVVSP--PPRLVDQSRTVR--------LEEQLRSLRAAHNTLSREFTSLRGSLANPPPSELAEDIRVSRSDVNTLLECFGAPSSYAEGMENRFERLRSRIESVERTLTSPANAARPVVS------HRETQSRNRKSRKDRDSNRXHGXXXXXXXXXXXXXXXXXXXDSSVSDDPQDLYGRSSRSKRSSATYGAIRSRPKGRRHPGLKPFKPTNPLYRTFLSYRYYRLEDSSLVRTPRNTGKVKDCIKRMQLSLRNRSSTGDDPILVLDFLHSFVAEDHILGMNEGQAYVALPYFLRGFAEDQFLSVRGSSPACEGGVTCWPEAVQYLLRSYATNSAIQAAILALRDTRQRSGELETDYSVRLNKAFHRCGNVYPAWERCTMFIDGLDPAIKTVVARYREQEPKVTYLELVQFARAEGDALRARNPGSWSKAAKALLL 473
            M  P+   RSR       SG   ST +PQ+L P P D+  +PG   +DP P S     +  V     P  P   V Q+ + R        LE Q+R L+++   L ++ T LR    +    +++ D+RV R+DVNT++E      +  + +  R  RL  R+E+VE+T+   A      VS      HR      RK  K  +                  XXXXXX  +  S        R+SRSK + AT+GA+R+R KGR+H GLK  KPTN LYR  LSYRYYRLEDSS+ RTPR TG++KDCIKR++L+LR    TG+DPIL+LDFL  FVAE  ILGM+E QAY+ALPYFLRG AEDQF SVRGSS A EGGVTCWPEAVQYLLRSYAT +AIQAAILALRDTRQ+S E ET YS RL KAFHRCGNVY A ERCTMF+DGLDP I+T+VAR+RE   ++TYLELVQFA+AEGDALRAR  G+  ++ K L L
Sbjct:    1 MPRPSNTGRSRTGSMPGSSGPPGSTGLPQSLPPLPRDALTMPGN--DDPVPASRGPRSVNEVPEAQGPADPALAVAQAMSSRSDEFTLRELEAQVRILQSSQVNLIQDITKLRTRFDDADVRDVSNDVRVLRADVNTVMEGRKVLGTLLQEVAERLNRLADRLETVEQTIIHDAVPPGAPVSEGSRKWHRAMDCHRRKKVKMEEDLSSSSSSESDVRSHGFSXXXXXXEPNHRS--------RASRSKYTEATHGAVRTREKGRKHLGLKELKPTNLLYRRLLSYRYYRLEDSSMERTPRGTGRLKDCIKRLELTLRKHQFTGEDPILILDFLARFVAEADILGMSEAQAYIALPYFLRGMAEDQFNSVRGSSRATEGGVTCWPEAVQYLLRSYATGNAIQAAILALRDTRQKSEESETAYSTRLTKAFHRCGNVYSAQERCTMFVDGLDPTIRTLVARHREDRRRITYLELVQFAQAEGDALRARK-GTKHRSGKVLHL 489          
BLAST of Gchil3358.t1 vs. uniprot
Match: A0A2V3ICD1_9FLOR (Uncharacterized protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ICD1_9FLOR)

HSP 1 Score: 125 bits (315), Expect = 4.090e-29
Identity = 115/307 (37.46%), Postives = 156/307 (50.81%), Query Frame = 0
Query:    1 METPATRSRSR------QSGDARSTDVPQALAPTP-DSREIPGTGTEDPQPDS----GLTTVATVVSP--PPRLVDQSRTVR--------LEEQLRSLRAAHNTLSREFTSLRGSLANPPPSELAEDIRVSRSDVNTLLECFGAPSSYAEGMENRFERLRSRIESVERTLTSPANAARPVVS------HRETQSRNRKSRKDRDSNRXHGXXXXXXXXXXXXXXXXXXXDSSVSDDPQDLYGRSSRSKRSSATYGAIRSRPKGRRHPGLKPFKPTNPLYRTFLSYRYYRLEDSSLVRTPRNTGKVKD 280
            M  P+   RSR       SG   ST +PQ+L P P D+  +PG   +DP P S     +  V     P  P     Q+ + R        LE Q+R L+++   L ++ T LR    +    +++ D+RV R+DVNT++E      +  + +  R  RL +R+E+VE+T+   A      VS      HR T    RK  K  +                 XXXXXXXX +  S        R+SRSK + AT+GA+R+R KGR+H GLK  KPTN LYR  LSYRYYRLEDSS+ RT R TG+VKD
Sbjct:    1 MPRPSNTGRSRTGSVPGSSGPPGSTGLPQSLPPLPRDALTMPGN--DDPVPASRGPRSVNEVPEAQGPADPAMAAAQAMSSRSDEFTLRELEAQVRILQSSQVNLIQDITKLRTRFDDADVRDVSNDVRVLRADVNTVMEGRKVSGTLLQEVAERLNRLAARLETVEQTIIHDAVPPGAPVSEGSRKSHRATDRHRRKKVKMEEGLSSSSSSESDVRSHGSXXXXXXXXXNHRS--------RASRSKYTEATHGAVRTREKGRKHLGLKELKPTNLLYRKLLSYRYYRLEDSSMERTSRGTGRVKD 297          
BLAST of Gchil3358.t1 vs. uniprot
Match: A0A2V3IT91_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IT91_9FLOR)

HSP 1 Score: 103 bits (256), Expect = 5.130e-22
Identity = 63/163 (38.65%), Postives = 97/163 (59.51%), Query Frame = 0
Query:    2 ETPATRSRSRQSGDARSTDVPQALAPTPDSREIPGTGTEDPQPDSGLTTVATVVSPPPRLVDQSRTVRLEEQLRSLRAAHNTLSREFTSLRGSLANPPPSELAEDIRVSRSDVNTLLECFGAPSSYAEGMENRFERLRSRIESVERTL-TSPANAARPVVSHR 163
            E+   R  SRQ    R  +  +A     + +E      E+ +P +G     TV SPPP L +Q++ V LEEQ  +++AAHN +  E TSL  ++ + P   + ++IR+ RSD+N +L+ FG P+ + E +E RF+R+R R+ESVE+ + TS A A +PVVS R
Sbjct:    9 ESATARCCSRQGALLRKLEDTRAPGMDLEQKETTKATPENVKPGAGPAAFVTVGSPPPSLGEQAQIVPLEEQFLNMQAAHNAIVGELTSLGETVESYPVQGMGDEIRLLRSDINYMLDYFGIPAPFVEVIEKRFDRVRIRLESVEKAVYTSAAAAVKPVVSER 171          
The following BLAST results are available for this feature:
BLAST of Gchil3358.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IMI9_9FLOR1.360e-13051.00Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ICD1_9FLOR4.090e-2937.46Uncharacterized protein n=2 Tax=Gracilariopsis cho... [more]
A0A2V3IT91_9FLOR5.130e-2238.65Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 67..87
NoneNo IPR availableCOILSCoilCoilcoord: 128..148
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..19
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 146..246
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 163..198
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..64
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 199..227

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000168_piloncontigtig00000168_pilon:419043..420464 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil3358.t1Gchil3358.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000168_pilon 419043..420464 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil3358.t1 ID=Gchil3358.t1|Name=Gchil3358.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=474bp
METPATRSRSRQSGDARSTDVPQALAPTPDSREIPGTGTEDPQPDSGLTT
VATVVSPPPRLVDQSRTVRLEEQLRSLRAAHNTLSREFTSLRGSLANPPP
SELAEDIRVSRSDVNTLLECFGAPSSYAEGMENRFERLRSRIESVERTLT
SPANAARPVVSHRETQSRNRKSRKDRDSNRKHGHPSDSSSESDGKPSDSE
SSDSSVSDDPQDLYGRSSRSKRSSATYGAIRSRPKGRRHPGLKPFKPTNP
LYRTFLSYRYYRLEDSSLVRTPRNTGKVKDCIKRMQLSLRNRSSTGDDPI
LVLDFLHSFVAEDHILGMNEGQAYVALPYFLRGFAEDQFLSVRGSSPACE
GGVTCWPEAVQYLLRSYATNSAIQAAILALRDTRQRSGELETDYSVRLNK
AFHRCGNVYPAWERCTMFIDGLDPAIKTVVARYREQEPKVTYLELVQFAR
AEGDALRARNPGSWSKAAKALLL*
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