Gchil3393.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil3393.t1
Unique NameGchil3393.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length113
Homology
BLAST of Gchil3393.t1 vs. uniprot
Match: A0A2V3J408_9FLOR (Dynein light chain n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J408_9FLOR)

HSP 1 Score: 191 bits (485), Expect = 4.210e-61
Identity = 98/117 (83.76%), Postives = 101/117 (86.32%), Query Frame = 0
Query:    1 MTTAAEAPGAVRGQ-----VADQKFVPVDKQPRVVVKSADMPEDMQRKAIELALTALDRFELERDMAKFLKKEFDNRYQPSWHCIVGRHFGSYVTHETSGFLYFYIEKTAVLLFRSG 112
            MT A EA G VR Q      A+ KFVPV  QPRVV+KSADMPEDM RKAIELALTALDRFELERDMAKFLKKEFD RYQPSWHCIVGRHFGSYVTHE+SGFLYFYIEKTAVLLFRSG
Sbjct:    1 MTLAPEAAGTVRSQSKEEHFAEHKFVPVKNQPRVVIKSADMPEDMIRKAIELALTALDRFELERDMAKFLKKEFDTRYQPSWHCIVGRHFGSYVTHESSGFLYFYIEKTAVLLFRSG 117          
BLAST of Gchil3393.t1 vs. uniprot
Match: R7QH34_CHOCR (Dynein light chain n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QH34_CHOCR)

HSP 1 Score: 166 bits (421), Expect = 2.640e-51
Identity = 78/94 (82.98%), Postives = 87/94 (92.55%), Query Frame = 0
Query:   19 KFVPVDKQPRVVVKSADMPEDMQRKAIELALTALDRFELERDMAKFLKKEFDNRYQPSWHCIVGRHFGSYVTHETSGFLYFYIEKTAVLLFRSG 112
            + +P  +QPRVVVKSADMP+DMQRKAIELAL ALDRFELERDMA++LKKEFD R+QPSWHCIVGRHFGSYVTHE +GFLYFYIEK A+LLFRSG
Sbjct:   27 RHIPASRQPRVVVKSADMPDDMQRKAIELALVALDRFELERDMAQYLKKEFDARFQPSWHCIVGRHFGSYVTHEGAGFLYFYIEKIAILLFRSG 120          
BLAST of Gchil3393.t1 vs. uniprot
Match: Q4FKD8_TRYB2 (Dynein light chain n=12 Tax=Trypanosomatidae TaxID=5654 RepID=Q4FKD8_TRYB2)

HSP 1 Score: 127 bits (320), Expect = 2.570e-36
Identity = 54/85 (63.53%), Postives = 73/85 (85.88%), Query Frame = 0
Query:   28 RVVVKSADMPEDMQRKAIELALTALDRFELERDMAKFLKKEFDNRYQPSWHCIVGRHFGSYVTHETSGFLYFYIEKTAVLLFRSG 112
            + ++K+ADMPEDMQ  A+E+AL AL++F +E+D+A ++KKEFD +YQP+WHCIVGR+FGSYVTHET  FLYFY  + A+LLF+SG
Sbjct:    6 KAIIKNADMPEDMQSDAVEVALQALEKFNIEKDIAAYIKKEFDKKYQPTWHCIVGRNFGSYVTHETHSFLYFYFGQVAILLFKSG 90          
BLAST of Gchil3393.t1 vs. uniprot
Match: DYL1_HELCR (Dynein light chain LC6, flagellar outer arm n=6 Tax=Eleutherozoa TaxID=133551 RepID=DYL1_HELCR)

HSP 1 Score: 123 bits (308), Expect = 1.680e-34
Identity = 52/85 (61.18%), Postives = 72/85 (84.71%), Query Frame = 0
Query:   28 RVVVKSADMPEDMQRKAIELALTALDRFELERDMAKFLKKEFDNRYQPSWHCIVGRHFGSYVTHETSGFLYFYIEKTAVLLFRSG 112
            + V+K+ADMPEDMQ+ A++ A  AL++F +E+D+A ++KKEFD +Y P+WHCIVGR+FGSYVTHET  F+YFY+ + AVLLF+SG
Sbjct:    5 KAVIKNADMPEDMQQDAVDCATQALEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAVLLFKSG 89          
BLAST of Gchil3393.t1 vs. uniprot
Match: T2M856_HYDVU (Dynein light chain n=5 Tax=Eukaryota TaxID=2759 RepID=T2M856_HYDVU)

HSP 1 Score: 123 bits (308), Expect = 1.680e-34
Identity = 54/85 (63.53%), Postives = 71/85 (83.53%), Query Frame = 0
Query:   28 RVVVKSADMPEDMQRKAIELALTALDRFELERDMAKFLKKEFDNRYQPSWHCIVGRHFGSYVTHETSGFLYFYIEKTAVLLFRSG 112
            + VVK+ADM EDMQ+ AIE A  A+++F +E+D+A F+KKEFD +Y P+WHCIVGR+FGSYVTHET  F+YFYI + A+LLF+SG
Sbjct:    5 KAVVKNADMSEDMQQDAIECATNAMEKFNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYIGQVAILLFKSG 89          
BLAST of Gchil3393.t1 vs. uniprot
Match: A0A448WG77_9PLAT (Dynein light chain n=2 Tax=Protopolystoma xenopodis TaxID=117903 RepID=A0A448WG77_9PLAT)

HSP 1 Score: 122 bits (307), Expect = 2.530e-34
Identity = 52/89 (58.43%), Postives = 72/89 (80.90%), Query Frame = 0
Query:   24 DKQPRVVVKSADMPEDMQRKAIELALTALDRFELERDMAKFLKKEFDNRYQPSWHCIVGRHFGSYVTHETSGFLYFYIEKTAVLLFRSG 112
            ++  + V+K+ADMPEDMQ +A+     A+D++ +E+D+A +LKKEFD RY P+WHCIVGR+FGSYVTHET  F+YFY+ + AVLLF+SG
Sbjct:    3 EESRKAVIKNADMPEDMQAEAVRCCADAMDKYNIEKDIAAYLKKEFDKRYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAVLLFKSG 91          
BLAST of Gchil3393.t1 vs. uniprot
Match: V4AKP2_LOTGI (Dynein light chain n=2 Tax=Mollusca TaxID=6447 RepID=V4AKP2_LOTGI)

HSP 1 Score: 122 bits (306), Expect = 3.380e-34
Identity = 52/85 (61.18%), Postives = 72/85 (84.71%), Query Frame = 0
Query:   28 RVVVKSADMPEDMQRKAIELALTALDRFELERDMAKFLKKEFDNRYQPSWHCIVGRHFGSYVTHETSGFLYFYIEKTAVLLFRSG 112
            + V+K+ADM EDMQ ++IE A TAL++F +E+D+A ++KKEFD +Y P+WHCIVGR+FGSYVTHET  F+YFY+ + A+LLF+SG
Sbjct:    5 KAVIKNADMAEDMQSESIECATTALEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89          
BLAST of Gchil3393.t1 vs. uniprot
Match: A0A7C9DZ94_OPUST (Dynein light chain n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9DZ94_OPUST)

HSP 1 Score: 123 bits (308), Expect = 3.730e-34
Identity = 56/106 (52.83%), Postives = 83/106 (78.30%), Query Frame = 0
Query:    9 GAVRGQVA--DQKFVPVDKQPRVVVKSADMPEDMQRKAIELALTALDRFELERDMAKFLKKEFDNRYQPSWHCIVGRHFGSYVTHETSGFLYFYIEKTAVLLFRSG 112
            GA  G+ +  D+K  P     RVV+KSADM +DMQ++A+++A+ A ++  +E+D+A+ +KKEFD +Y  +WHCIVGR+FGSYVTHET+ F+YFY+++ AVLLF+SG
Sbjct:   11 GAFAGKPSSDDRKSSPASSGKRVVIKSADMSDDMQKEAVDIAIAAFEKHSVEKDVAERIKKEFDKKYGATWHCIVGRNFGSYVTHETNHFIYFYLDQKAVLLFKSG 116          
BLAST of Gchil3393.t1 vs. uniprot
Match: A0A2P2JQ96_RHIMU (Dynein light chain n=1 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2JQ96_RHIMU)

HSP 1 Score: 123 bits (308), Expect = 4.200e-34
Identity = 54/108 (50.00%), Postives = 85/108 (78.70%), Query Frame = 0
Query:    9 GAVRGQVADQKFV----PVDKQPRVVVKSADMPEDMQRKAIELALTALDRFELERDMAKFLKKEFDNRYQPSWHCIVGRHFGSYVTHETSGFLYFYIEKTAVLLFRSG 112
            G V+    D+K +    PV    ++++K+ADM EDMQR+A+++A++A ++  +E+D+A+ +KKEFD ++ P+WHCIVGR+FGSYVTHET+ F+YFY+++ AVLLF+SG
Sbjct:   13 GLVKPNPDDRKLLSAVGPVPTAKKIIIKNADMKEDMQREAVDIAISAFEKHNVEKDVAEHIKKEFDKKHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG 120          
BLAST of Gchil3393.t1 vs. uniprot
Match: DYL2_SCHMA (Probable dynein light chain n=7 Tax=Schistosoma TaxID=6181 RepID=DYL2_SCHMA)

HSP 1 Score: 122 bits (305), Expect = 4.800e-34
Identity = 51/85 (60.00%), Postives = 70/85 (82.35%), Query Frame = 0
Query:   28 RVVVKSADMPEDMQRKAIELALTALDRFELERDMAKFLKKEFDNRYQPSWHCIVGRHFGSYVTHETSGFLYFYIEKTAVLLFRSG 112
            + V+K+ADM EDMQ  A+  A  ALD++E+E+D+A ++KKEFD +Y P+WHCIVG+HFGSYVTHET  F+YFY+++ A LLF+SG
Sbjct:    5 KAVIKNADMHEDMQETAVHTAAAALDKYEIEKDVAAYIKKEFDRKYNPNWHCIVGKHFGSYVTHETQHFIYFYLQERAFLLFKSG 89          
The following BLAST results are available for this feature:
BLAST of Gchil3393.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J408_9FLOR4.210e-6183.76Dynein light chain n=1 Tax=Gracilariopsis chorda T... [more]
R7QH34_CHOCR2.640e-5182.98Dynein light chain n=1 Tax=Chondrus crispus TaxID=... [more]
Q4FKD8_TRYB22.570e-3663.53Dynein light chain n=12 Tax=Trypanosomatidae TaxID... [more]
DYL1_HELCR1.680e-3461.18Dynein light chain LC6, flagellar outer arm n=6 Ta... [more]
T2M856_HYDVU1.680e-3463.53Dynein light chain n=5 Tax=Eukaryota TaxID=2759 Re... [more]
A0A448WG77_9PLAT2.530e-3458.43Dynein light chain n=2 Tax=Protopolystoma xenopodi... [more]
V4AKP2_LOTGI3.380e-3461.18Dynein light chain n=2 Tax=Mollusca TaxID=6447 Rep... [more]
A0A7C9DZ94_OPUST3.730e-3452.83Dynein light chain n=1 Tax=Opuntia streptacantha T... [more]
A0A2P2JQ96_RHIMU4.200e-3450.00Dynein light chain n=1 Tax=Rhizophora mucronata Ta... [more]
DYL2_SCHMA4.800e-3460.00Probable dynein light chain n=7 Tax=Schistosoma Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001372Dynein light chain, type 1/2SMARTSM01375Dynein_light_2coord: 24..111
e-value: 1.9E-49
score: 180.3
IPR001372Dynein light chain, type 1/2PFAMPF01221Dynein_lightcoord: 29..111
e-value: 7.6E-36
score: 122.4
IPR001372Dynein light chain, type 1/2PANTHERPTHR11886DYNEIN LIGHT CHAINcoord: 24..112
IPR037177Dynein light chain superfamilyGENE3D3.30.740.10Protein Inhibitor Of Neuronal Nitric Oxide Synthase;coord: 20..111
e-value: 4.6E-38
score: 131.1
IPR037177Dynein light chain superfamilySUPERFAMILY54648DLCcoord: 28..112
NoneNo IPR availablePANTHERPTHR11886:SF62DYNEIN LIGHT CHAINcoord: 24..112
IPR019763Dynein light chain, type 1/2, conserved sitePROSITEPS01239DYNEIN_LIGHT_1coord: 78..92

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000168_piloncontigtig00000168_pilon:868913..869251 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil3393.t1Gchil3393.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000168_pilon 868913..869251 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil3393.t1 ID=Gchil3393.t1|Name=Gchil3393.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=113bp
MTTAAEAPGAVRGQVADQKFVPVDKQPRVVVKSADMPEDMQRKAIELALT
ALDRFELERDMAKFLKKEFDNRYQPSWHCIVGRHFGSYVTHETSGFLYFY
IEKTAVLLFRSG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001372Dynein_light_chain_typ-1/2
IPR037177DLC_sf
IPR019763Dynein_light_1/2_CS