Gchil3362.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil3362.t1
Unique NameGchil3362.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length324
Homology
BLAST of Gchil3362.t1 vs. uniprot
Match: A0A2V3IG22_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IG22_9FLOR)

HSP 1 Score: 414 bits (1065), Expect = 7.810e-143
Identity = 214/323 (66.25%), Postives = 256/323 (79.26%), Query Frame = 0
Query:    1 MGRDATSVAPSDAPCGDDAAYVAKGPHPLDVCQTQRVKVVSDVERVQRKWQMASCNHFLHVFAPHLPLKLVSEDAAEDLTPEALERAVAAPEQSAQSCALLRDVIMALLLALDAVSLKSVHSAWYQALCVLVDANAELFADCFQFGTNELTHYRDGMHFITTAGWHVRLGLLLALCDMAAERAKCVRDAIRDSELASTITNSDLDHKGFRLQPLGRCSQRRFHYKVGATRIYSGYKRKGTGALLVECSDSRTMALLADALATSPFPRDATLATDIRTKFLAPLQELELRARRKAERKLQEQRLRDESRRRNSVRPRRANATYL 323
            MGRDA S   +D   GD+       PHPL+VC+T  VK++ D+ERVQRKWQMASCNHFLHVFA  LPL+ +S D AEDLTPE LERA+A PE+S +SC +LRDV+ ALL++L+AVSLK+  ++W+QAL V V+ + E F DCFQ+GTN L  Y +GM F+  +GWHVRLGLLLALCD+ AERAK +RDAIR+SE+AST+T SD+D KG+RLQPLGRCSQRRFHYK+G TRIYSGYKRKG GALLVECSDS TM+ LA++L  SP  RD  L+TDIRTKFLAPLQE E R RRK ERK   +  R+ESRRRNSVRPRR+ A YL
Sbjct:    1 MGRDAMSHENNDFHPGDE-------PHPLEVCKTNEVKIIPDMERVQRKWQMASCNHFLHVFADKLPLREISVDTAEDLTPETLERAIAEPERSMESCIILRDVLTALLVSLEAVSLKNSQTSWFQALRVHVNRHPEEFGDCFQYGTNVLERYENGMDFLVESGWHVRLGLLLALCDITAERAKAIRDAIRESEVASTLTKSDIDQKGYRLQPLGRCSQRRFHYKIGKTRIYSGYKRKGNGALLVECSDSSTMSKLAESLGCSPHSRDTKLSTDIRTKFLAPLQEHEERVRRKMERKRLAEIQREESRRRNSVRPRRSRAAYL 316          
BLAST of Gchil3362.t1 vs. uniprot
Match: R7QIC6_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QIC6_CHOCR)

HSP 1 Score: 261 bits (668), Expect = 2.880e-83
Identity = 141/272 (51.84%), Postives = 188/272 (69.12%), Query Frame = 0
Query:   52 MASCNHFLHVFAPHLPLKLVSEDAAEDLTPEALERAVAAPEQSAQSCALLRDVIMALLLALDAVSLKSVHSAWYQALCVLVDANAELFADCFQFGTNELTHYRDGMHFITTAGWHVRLGLLLALCDMAAERAKCVRDAIRDSELASTITNSDLDHKGFRLQPLGRCSQRRFHYKVGATRIYSGYKRKGTGALLVECSDSRTMALLADALATSPFPRDATLATDIRTKFLAPLQELELRARRKAERKLQEQRLRDESRRRNSVRPRRANATYL 323
            MAS  HF   F   +PLK +SED  EDLTP  LE AV  PE  A++C  LRD+IM LLL + A + KS+ + W+Q+L +LV +N   F DC+    N L  + +G+ F+T   W+VRLG++L+LCD+AAE ++ +RDAIR++EL  T   + ++ KG+RL P+GRCS+RR HYKVG TRIYSGYKRKGTGALL ECSDS +M  LA AL ++   RD TLA+ IR   LAPL ELE + ++K E+    +  ++ESRRRNS RPRR+ A+Y 
Sbjct:    1 MASVAHFFEAFKDVIPLKEISEDTYEDLTPSLLEGAVVEPEVDARACLALRDLIMTLLLTIGAATKKSLATTWFQSLRILVGSNRAAFLDCYDHHENVLGRFENGLDFVTNVDWNVRLGIMLSLCDVAAETSQSIRDAIREAELECTHQKNAIEAKGYRLLPMGRCSKRRVHYKVGKTRIYSGYKRKGTGALLPECSDSESMKQLAAALESTQTIRDQTLASRIRDIHLAPLIELEEKNKKKLEKTRLAEIRKEESRRRNSARPRRSKASYF 272          
The following BLAST results are available for this feature:
BLAST of Gchil3362.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IG22_9FLOR7.810e-14366.25Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QIC6_CHOCR2.880e-8351.84Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 283..303
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 299..323
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 299..313

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000168_piloncontigtig00000168_pilon:436078..437049 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil3362.t1Gchil3362.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000168_pilon 436078..437049 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil3362.t1 ID=Gchil3362.t1|Name=Gchil3362.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=324bp
MGRDATSVAPSDAPCGDDAAYVAKGPHPLDVCQTQRVKVVSDVERVQRKW
QMASCNHFLHVFAPHLPLKLVSEDAAEDLTPEALERAVAAPEQSAQSCAL
LRDVIMALLLALDAVSLKSVHSAWYQALCVLVDANAELFADCFQFGTNEL
THYRDGMHFITTAGWHVRLGLLLALCDMAAERAKCVRDAIRDSELASTIT
NSDLDHKGFRLQPLGRCSQRRFHYKVGATRIYSGYKRKGTGALLVECSDS
RTMALLADALATSPFPRDATLATDIRTKFLAPLQELELRARRKAERKLQE
QRLRDESRRRNSVRPRRANATYL*
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