Gchil7492.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7492.t1
Unique NameGchil7492.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length228
Homology
BLAST of Gchil7492.t1 vs. uniprot
Match: A0A2V3J324_9FLOR (PRA1 family protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J324_9FLOR)

HSP 1 Score: 285 bits (728), Expect = 1.970e-94
Identity = 150/229 (65.50%), Postives = 177/229 (77.29%), Query Frame = 0
Query:    3 AAYSDID-GTSRPADPPAGEPPL---KPSAVERVHAVARGAHNVAADATHSVKQFLQAPMPQLSLYTEPFDPSASHSMRQRLQLVGDNCRRWGEFADLSTFNTPPASEAKRRVAHNLETFFYNYVLVAFVLLVLCGLFHPIRALALAVMVLTAVLLYIVFPEDYPIGDRFSITKPIKHVFMTLFALLVLTVGHVFNFXXLVLCITLPIVLLHAFFREHDASTALDNTHI 227
            A Y ++D  T+RPADPP    PL     SA  RV AVARGA N AADAT SVK FL APMPQLSLYT+PF+PSAS S R RLQLV DNCR W EFA+LS  N PPA+E KRRVAHNLETFFYNYV+VAF +L++ G+ HP+ ALALAV++    +LYI+FPEDY + D F I+KPIKHVF+TL ALLVLTVGHV NF  LV+CI LPIVLLH+ FREHD + A+++ H+
Sbjct:    6 AGYRNLDDATARPADPPNASHPLPQHNASAASRVQAVARGAQNAAADATQSVKDFLSAPMPQLSLYTDPFNPSASLSARDRLQLVCDNCRPWREFAELSAINAPPAAEVKRRVAHNLETFFYNYVVVAFAVLLIAGVLHPLSALALAVLLFAIFMLYIMFPEDYRVTDTFHISKPIKHVFITLLALLVLTVGHVLNFLFLVVCIALPIVLLHSLFREHDPNAAVESLHV 234          
BLAST of Gchil7492.t1 vs. uniprot
Match: R7QRI6_CHOCR (PRA1 family protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QRI6_CHOCR)

HSP 1 Score: 162 bits (410), Expect = 3.890e-47
Identity = 83/164 (50.61%), Postives = 108/164 (65.85%), Query Frame = 0
Query:   58 MPQLSLYTEPFDPSASHSMRQRLQLVGDNCRRWGEFADLSTFNTPPASEAKRRVAHNLETFFYNYVLVAFVLLVLCGLFHPIRALALAVMVLTAVLLYIVFPEDYPIGDRFSITKPIKHVFMTLFALLVLTVGHVFNFXXLVLCITLPIVLLHAFFREHDASTA 221
            MP  + Y EP +P+A +S++ R QLV ++CR W EF D   F  PPASEAK RV HN+E FFYNY+++A  LL +  +FHP+RA+ LA  V  A +LYI+FPEDY + D   I+ PIKH  M +  +LVL VGHVF     V     PIVL+HAF R+H A+ A
Sbjct:    1 MPDFNPYVEPLNPAAQYSLKDRAQLVVESCRPWAEFLDPHAFAPPPASEAKLRVGHNVEVFFYNYLVLAMALLAVFAVFHPVRAVLLAATVAVAAVLYILFPEDYQVTDNIVISMPIKHAVMAVLTVLVLVVGHVFALLFWVAVTFAPIVLVHAFLRQHSAAPA 164          
BLAST of Gchil7492.t1 vs. uniprot
Match: A0A5J4YMQ5_PORPP (PRA1 family protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YMQ5_PORPP)

HSP 1 Score: 114 bits (285), Expect = 7.690e-28
Identity = 67/168 (39.88%), Postives = 94/168 (55.95%), Query Frame = 0
Query:   49 SVKQFLQAPMPQLSLYTEPFDPSASHSMRQRLQLVGDNCRRWGEFADLSTFNTPPASEAKRRVAHNLETFFYNYVLVAFVLLVLCGLFHPIRALALAVMVLTAVLLYIVFPEDYPIGDRFSITKPIKHVFMTLFALLVLTVGHVFNFXXLVLCITLPIVLLHAFFREH 216
            +VK  + A M  + +YTEP  P +  S++ R+ +V ++ R WGEF   S  N PPA E   R +HN+ETFFYNYVL+A + LV     HPI  L+L V    AV  Y++ PE   IG R  +  P KH+ M + A + L  GH+      +    + +V LHA FR+H
Sbjct:   40 NVKDAVSAMMKDVKIYTEPIQPGSEMSLKDRVVVVWESARPWGEFFRPSAMNKPPAGEMGARFSHNVETFFYNYVLLAVLFLVSMFFIHPIATLSLCVCGAFAVYAYVLHPEPIEIGGR-VLETPAKHIAMAVLAGIALLFGHMGGLIVSLAVFLMVVVGLHAVFRDH 206          
BLAST of Gchil7492.t1 vs. uniprot
Match: A0A7S0BLW7_9RHOD (PRA1 family protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BLW7_9RHOD)

HSP 1 Score: 76.6 bits (187), Expect = 1.560e-13
Identity = 48/130 (36.92%), Postives = 67/130 (51.54%), Query Frame = 0
Query:   62 SLYTEPFDPSASHSMRQRLQLVGDNCRRWGEFADLSTFNTPPASEAKRRVAHNLETFFYNYVLVAFVLLVLCGLFHPIRALALAVMVLTAVLLYIVFPEDYPIGDRFSITKPIKHVFMTLFALLVLTVGH 191
            SLYT PFD S   S  +R++LV ++ R WGEF D + F  P  SE   R+ HN E FF NYV+   + L+L    HP+  L+L   +  A   Y    +D  + D   I    K V + +  +LV+ V H
Sbjct:   50 SLYTAPFDLSTDSSFGERVKLVFESARPWGEFFDFNNFKWPKGSEIHERITHNSEVFFSNYVIACALYLLLLLFIHPLGVLSLVGFLCLASWFYGSRGKDIRVTDTVVINPTSKRVLLGVAFVLVVFVFH 179          
BLAST of Gchil7492.t1 vs. uniprot
Match: A0A7S3ECP6_9RHOD (PRA1 family protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3ECP6_9RHOD)

HSP 1 Score: 73.2 bits (178), Expect = 3.060e-12
Identity = 44/118 (37.29%), Postives = 59/118 (50.00%), Query Frame = 0
Query:   62 SLYTEPFDPSASHSMRQRLQLVGDNCRRWGEFADLSTFNTPPASEAKRRVAHNLETFFYNYVLVAFVLLVLCGLFHPIRALALAVMVLTAVLLYIVFPEDYPIGDRFSITKPIKHVFM 179
            SLYT PFD S   S  +R++LV ++ R WGEF DL+ F  P  SE   R+ HN   FF NYV+   + L    L HP+  L+L   +  A   Y     D  + D   I +  K V +
Sbjct:   51 SLYTAPFDLSTDSSFGERVKLVFESARPWGEFFDLNNFKLPKMSEIHERITHNSVVFFSNYVIACALELPFLALIHPLGVLSLVGFLCLASWFYGSRGNDIRVTDTVVINQTSKRVLL 168          
BLAST of Gchil7492.t1 vs. uniprot
Match: M2Y8S7_GALSU (PRA1 family protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y8S7_GALSU)

HSP 1 Score: 72.4 bits (176), Expect = 1.220e-11
Identity = 41/125 (32.80%), Postives = 68/125 (54.40%), Query Frame = 0
Query:   63 LYTEPFDPSASHSMRQRLQLVGDNCRRWGEFADLSTFNTPPASEAKRRVAHNLETFFYNYVLVAFVLLVLCGLFHPIRALALAVMVLTAVLLYIVFPEDYPIGDRFSITKPIKHVFMTLFALLVL 187
            L+T PF+P+    +R RL L+  + + W +F D+ +F+ PP      RVA NL+++ YNYV+      +   LFHP+  L+L +  L  V L++V+P     G    ++  IK +  +  AL+ L
Sbjct:  104 LFTTPFEPNQELGVRDRLTLIWGSAKPWKDFLDIRSFSIPPMDSWSTRVATNLQSYLYNYVICVTFFCLFLLLFHPLGILSLFLETLLVVALFLVYPGHTETGLLGVVSPTIKVIVASAMALIFL 228          
BLAST of Gchil7492.t1 vs. uniprot
Match: A0A7S2ZMV2_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZMV2_9RHOD)

HSP 1 Score: 61.6 bits (148), Expect = 8.110e-9
Identity = 29/60 (48.33%), Postives = 36/60 (60.00%), Query Frame = 0
Query:   62 SLYTEPFDPSASHSMRQRLQLVGDNCRRWGEFADLSTFNTPPASEAKRRVAHNLETFFYN 121
            SLYT PFD S   S  +R++LV ++ R WGEF DL+ F  P  SE   R+ HN   FF N
Sbjct:   51 SLYTAPFDLSTDSSFGERVKLVFESARPWGEFFDLNNFKLPKMSEIHERITHNSVVFFSN 110          
The following BLAST results are available for this feature:
BLAST of Gchil7492.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A2V3J324_9FLOR1.970e-9465.50PRA1 family protein n=1 Tax=Gracilariopsis chorda ... [more]
R7QRI6_CHOCR3.890e-4750.61PRA1 family protein n=1 Tax=Chondrus crispus TaxID... [more]
A0A5J4YMQ5_PORPP7.690e-2839.88PRA1 family protein n=1 Tax=Porphyridium purpureum... [more]
A0A7S0BLW7_9RHOD1.560e-1336.92PRA1 family protein n=1 Tax=Rhodosorus marinus Tax... [more]
A0A7S3ECP6_9RHOD3.060e-1237.29PRA1 family protein n=1 Tax=Rhodosorus marinus Tax... [more]
M2Y8S7_GALSU1.220e-1132.80PRA1 family protein n=1 Tax=Galdieria sulphuraria ... [more]
A0A7S2ZMV2_9RHOD8.110e-948.33Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004895Prenylated rab acceptor PRA1PFAMPF03208PRA1coord: 86..221
e-value: 1.2E-22
score: 80.1
IPR004895Prenylated rab acceptor PRA1PANTHERPTHR19317PRENYLATED RAB ACCEPTOR 1-RELATEDcoord: 65..217
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26
NoneNo IPR availablePANTHERPTHR19317:SF0PRENYLATED RAB ACCEPTOR PROTEIN 1coord: 65..217
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 178..209
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 137..140
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..117
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 159..177
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 118..136
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 210..227
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 141..158
NoneNo IPR availableTMHMMTMhelixcoord: 141..158
NoneNo IPR availableTMHMMTMhelixcoord: 118..137
NoneNo IPR availableTMHMMTMhelixcoord: 178..209

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000007_piloncontigtig00000007_pilon:1504565..1505248 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7492.t1Gchil7492.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000007_pilon 1504565..1505248 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7492.t1 ID=Gchil7492.t1|Name=Gchil7492.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=228bp
MPAAYSDIDGTSRPADPPAGEPPLKPSAVERVHAVARGAHNVAADATHSV
KQFLQAPMPQLSLYTEPFDPSASHSMRQRLQLVGDNCRRWGEFADLSTFN
TPPASEAKRRVAHNLETFFYNYVLVAFVLLVLCGLFHPIRALALAVMVLT
AVLLYIVFPEDYPIGDRFSITKPIKHVFMTLFALLVLTVGHVFNFLFLVL
CITLPIVLLHAFFREHDASTALDNTHI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004895Prenylated_rab_accept_PRA1