Gchil7413.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7413.t1
Unique NameGchil7413.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length356
Homology
BLAST of Gchil7413.t1 vs. uniprot
Match: A0A2V3IYP2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYP2_9FLOR)

HSP 1 Score: 527 bits (1357), Expect = 4.460e-186
Identity = 248/357 (69.47%), Postives = 292/357 (81.79%), Query Frame = 0
Query:    1 MSSWK-RYSPVFILAVSIAFLGS-FDEAESACSKYIPIHQILGAPNKVQTFDDIDGFREIKAARIDVNNCMENSQNPTGHQFAGNYTLIGHEALLSDNECLVKQEGDDMVFESMQAIVITANGWTFQPTTIDLDDIDAEPGVESSDGWKESMAIFGLRGAEIIRPNLKFYDNTLLVPQNYTVVDAAMIQMGLRANGSQNVPGGQYGSNEMVNCPFGRDNLESERCRITASFAESVDTLVIMYAVFQKSKAETRAAAFISEIIMKCGCRCSQRDIGTRKLYAPVPGVTGECVERESTSPRTMCDVLGSTWCKKDDVVGYRPIGDALPNGNCPCVENRGYRVTVDSPFTPRNDFILNTV 355
            M  W  R S VF + + +  +   F  AESACSKY PIHQIL +PNKVQTFDD DGFREIKA + DVNNC ENSQNPTG QFAGNYTLIGHE+LL+D+ECLVKQ    M + SMQAIVI+ANGWTFQP  IDLDDIDAEPGV SSDGWKESMAIFG+RG++I+RP+LKFY+ +LLV QNYTV+ + + Q+GL  NG   VPGG Y S+EMVNCPFG+DN ESERCR+TASF   +DTLV+MYAV QKSK ETRAA+FISE+I+ CGCRCSQ D+G+RKL AP+PGV GECV++EST+PRT+CDVLGSTWC K ++  Y   G+ LPNGNCPC + +G+RV+VDSPF PRNDFILNTV
Sbjct:    1 MMKWAVRSSEVFFVIIGLVLVSDLFLVAESACSKYFPIHQILDSPNKVQTFDDTDGFREIKAVQYDVNNCKENSQNPTGKQFAGNYTLIGHESLLTDDECLVKQNDGKMYYNSMQAIVISANGWTFQPIRIDLDDIDAEPGVLSSDGWKESMAIFGMRGSDIVRPSLKFYNRSLLVAQNYTVIQSNLQQLGLSLNGEHMVPGGHYASDEMVNCPFGKDNKESERCRMTASFNLPIDTLVVMYAVLQKSKTETRAASFISEVIVNCGCRCSQIDVGSRKLLAPIPGVDGECVQKESTAPRTVCDVLGSTWCTKAEIASYTASGETLPNGNCPCTKGKGHRVSVDSPFQPRNDFILNTV 357          
BLAST of Gchil7413.t1 vs. uniprot
Match: A0A1X6PAP5_PORUM (Uncharacterized protein n=5 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PAP5_PORUM)

HSP 1 Score: 174 bits (440), Expect = 1.060e-47
Identity = 108/346 (31.21%), Postives = 180/346 (52.02%), Query Frame = 0
Query:   14 AVSIAFLGSFDEAESACSKYIPIHQILGAPNKVQTFDDIDGFREIKAARIDVNNCMENSQNPTGHQFA---GNYTLIGHEALLSDNECLVK--QEGDDMVFESMQAIVITANGWTFQPTTIDLDDIDAEPGVESSDGWKESMAIFGLRGAEIIRPNLKFYDNTLLVPQNYTVVDAAMIQMGLRANGSQNVPGGQYGS-NEMVNCPFGRDNLESERCRITASFAESVDTLVIMYAVFQKSKAETRAAAFISEIIMKCGCRCSQRDIGTRKLYAPVPGVTGECVERESTSPRTMCDVLGSTWCKKDDVVGYRPIGDALPNGNCPCVENRGYRVTVDSP---FTPRNDF 350
            AV++    +  +A SAC +Y+PIH+IL +   V  F D    R++KA ++ V  C      P+G  +     NYT++ HE+    + C+    ++G    +   QAIVI ANG+ F    + L+DIDA+P  + + GW+E+M+   +    ++RP++     +L+  Q + V  A++ ++G  ++    + G  Y S  E  NCPF  D +   +C+   S+   VD L+I+YA+ QKS  +  AAAF SE+ + CGC+C+++  G  ++  PV G  G C    S SP   CD +G+ WC+  +   +   G +   G C  V +     T+  P   +TP + F
Sbjct:   19 AVTLLAAATAADARSAC-EYVPIHRILASAGGVYKFAD---GRQLKARKVSVGGCSTMPALPSGIAYPDTNSNYTVMSHES----DACITGTGRDGSTPTYAGFQAIVIEANGFKFSADLV-LEDIDAQPVADPTQGWRETMSSLAMADGAVVRPSMTTKPGSLVAVQPFRVPRASLQEVGFPSSDDLLISGAAYSSWTETKNCPFMNDTMG--QCKAFVSYPTPVDRLLIIYAITQKSANDPNAAAFFSEVTLACGCQCAEKP-GASEMTVPVHGSAGTCKTVPSKSPAYRCDFMGNFWCETAEKTRWEMTGRS---GACALVSS-----TIQKPVSSYTPDSKF 344          
BLAST of Gchil7413.t1 vs. uniprot
Match: A0A1X6NYR9_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NYR9_PORUM)

HSP 1 Score: 172 bits (435), Expect = 9.640e-47
Identity = 104/332 (31.33%), Postives = 172/332 (51.81%), Query Frame = 0
Query:   25 EAESACSKYIPIHQILGAPNKVQTFDDIDGFREIKAARIDVNNCMENSQNPTGHQFA---GNYTLIGHEALLSDNECLVK--QEGDDMVFESMQAIVITANGWTFQPTTIDLDDIDAEPGVESSDGWKESMAIFGLRGAEIIRPNLKFYDNTLLVPQNYTVVDAAMIQMGLRANGSQNVPGGQYGS-NEMVNCPFGRDNLESERCRITASFAESVDTLVIMYAVFQKSKAETRAAAFISEIIMKCGCRCSQRDIGTRKLYAPVPGVTGECVERESTSPRTMCDVLGSTWCKKDDVVGYRPIGDALPNGNCPCVENRGYRVTVDSPFTPRNDF 350
            +A  AC KY+PIH+IL +   V TF D    R++KA R+DV  C       +G  +     NYT++ HE+    + C+    ++G    +   QAIVI +NG+ F    + L+DIDA+P  + + GW+E+M+   +    ++RP++     + +  Q + V  A++ ++G  ++    + G  Y S  E  NCPF  D   + +C+   S+ + +D L+I+YA+ QKS  +  AAAF SE+ + CGC+C  +D    K+  P+ G  G+C  + +T P   CD LGS WC+ +    +R     + +G   C           S +TP  +F
Sbjct:   51 DARQAC-KYVPIHRILSSAGGVFTFPD---GRQLKATRLDVGGCTTMPGLQSGIAYPDTNSNYTVMSHES----DACITGTGRDGSTPTYAGFQAIVIESNGFKFSADLV-LEDIDAQPVDDPTQGWRETMSSLAMADGAVVRPSMTTKPGSPVAVQPFRVPRASLQEVGFPSSDDLLISGAAYNSWTETKNCPFMND--PTGQCKAFVSYPDPIDRLLIIYAITQKSANDPNAAAFFSEVTLACGCQCEGKD-DVAKITIPIDGAPGKCRTKTTTRPTFGCDFLGSRWCETEASTAWR-----MTDGAGACTAKPSLISKPVSTYTPDANF 365          
The following BLAST results are available for this feature:
BLAST of Gchil7413.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IYP2_9FLOR4.460e-18669.47Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A1X6PAP5_PORUM1.060e-4731.21Uncharacterized protein n=5 Tax=Porphyra umbilical... [more]
A0A1X6NYR9_PORUM9.640e-4731.33Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..355

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000007_piloncontigtig00000007_pilon:1109060..1110127 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7413.t1Gchil7413.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000007_pilon 1109060..1110127 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7413.t1 ID=Gchil7413.t1|Name=Gchil7413.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=356bp
MSSWKRYSPVFILAVSIAFLGSFDEAESACSKYIPIHQILGAPNKVQTFD
DIDGFREIKAARIDVNNCMENSQNPTGHQFAGNYTLIGHEALLSDNECLV
KQEGDDMVFESMQAIVITANGWTFQPTTIDLDDIDAEPGVESSDGWKESM
AIFGLRGAEIIRPNLKFYDNTLLVPQNYTVVDAAMIQMGLRANGSQNVPG
GQYGSNEMVNCPFGRDNLESERCRITASFAESVDTLVIMYAVFQKSKAET
RAAAFISEIIMKCGCRCSQRDIGTRKLYAPVPGVTGECVERESTSPRTMC
DVLGSTWCKKDDVVGYRPIGDALPNGNCPCVENRGYRVTVDSPFTPRNDF
ILNTV*
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