Gchil7555.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7555.t1
Unique NameGchil7555.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length523
Homology
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BLAST of Gchil7555.t1 vs. uniprot
Match: A0A2V3J391_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J391_9FLOR)

HSP 1 Score: 152 bits (383), Expect = 1.880e-36
Identity = 76/141 (53.90%), Postives = 101/141 (71.63%), Query Frame = 0 
Query:  379 VQTSKGCSNCRLQVCTCQRRLYHQHEGTVAAPSVVSFKVRRGSKIHYMTE-NVSGEIKFGIRTCSDGILVGELTLYPQSATGPRRTGGRREWYILLRGFLILEVEESTIHLRQGDEVEFEEDTVFQMRNPCLQSTDLLCFL 518
            ++  K CS C  + CTC  R       T    S  +F VRRGS++ Y TE +V G +K GIR   DGI++GELTL+P S+TG R+T G RE+Y +L G+L+L+VE++T+HLR+GDEVEF EDTVFQ+RNPCL++TDL CFL
Sbjct:  396 IENRKNCSLCSCETCTCIER------ETNTEKSRRAFTVRRGSQMTYNTERDVFGMMKLGIRMSEDGIMLGELTLFPMSSTGRRKTTGHREYYFVLSGYLVLDVEDTTLHLRRGDEVEFCEDTVFQLRNPCLRATDLFCFL 530
The following BLAST results are available for this feature:
BLAST of Gchil7555.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J391_9FLOR1.880e-3653.90Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014710RmlC-like jelly roll foldGENE3D2.60.120.10Jelly Rollscoord: 413..518
e-value: 1.1E-5
score: 27.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 242..269
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 287..309
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..27
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 287..318
IPR011051RmlC-like cupin domain superfamilySUPERFAMILY51182RmlC-like cupinscoord: 443..521

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000007_piloncontigtig00000007_pilon:1877938..1879506 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7555.t1Gchil7555.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000007_pilon 1877938..1879506 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7555.t1 ID=Gchil7555.t1|Name=Gchil7555.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=523bp
MSVIRGHTATHRLSSTEAVSRRKSTRTRRIPGQWWKGGADLPVSKPQNAI
KIRSSTLPNNIQRCAKRGVSNTSIFKGLELLKKDIPRPSLSGNKSIVDDE
DRHGTINSRKTQKCQGTSQRRFLNAKEQLLSNKMAISSGETSLSRTADAG
NDAFDLEGHCKVSSSATNRNEQTIVRVPGETGNRLTDKYKIIGGKHITES
RVEQNNSTLGRTSSIQVSSGLCSAPNDLNIFNGNLLRDASSSSRPNSDVT
KASGVVMSEEVLSRHHATRKLTPESGSISHNSAHEVKTYGESRAPDSFLK
EKEIDDKSGQSFTAEPQRVSDDEGIKAGTVTHEIPSSSRPSPKIDCLNRN
TDFDQFEEPGPVNVVEQCIDDKVYDSSSVQTSKGCSNCRLQVCTCQRRLY
HQHEGTVAAPSVVSFKVRRGSKIHYMTENVSGEIKFGIRTCSDGILVGEL
TLYPQSATGPRRTGGRREWYILLRGFLILEVEESTIHLRQGDEVEFEEDT
VFQMRNPCLQSTDLLCFLFSPE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014710RmlC-like_jellyroll
IPR011051RmlC_Cupin_sf