Gchil7538.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7538.t1
Unique NameGchil7538.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length177
Homology
BLAST of Gchil7538.t1 vs. uniprot
Match: A0A2V3J260_9FLOR (Mitochondrial intermembrane space cysteine motif-containing protein MIX17 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J260_9FLOR)

HSP 1 Score: 191 bits (485), Expect = 3.490e-59
Identity = 115/177 (64.97%), Postives = 125/177 (70.62%), Query Frame = 0
Query:    1 MPRRSSRPSGGRRPAPSRASARPAARSASTRSRXXXXXXXXXXXXXXXXXXXXXXXPPPVAAQP-QQGSAMGGFMANVASTGLGVMAGRAMDRTFFGGSGSASEPISEPINAVDPASSEYSTEEPLPDTVCAREMLEFKKCMERNGSDIGACQWNIDILSACQRQQQDLGFANASRL 176
            MPRR+SRPSGGRRPAP+R  AR   RSASTRSR                     XX     AQP QQGSAMGGFMANVASTG+GVMAGRAMDR FFGG GSA  P   P      A  E +T+E LPD+VCARE+ EFKKCMERNGSDI ACQWNID+L+ACQRQQQ+LGFANA RL
Sbjct:    1 MPRRTSRPSGGRRPAPARGPARAPTRSASTRSRPAPPPAQTRAKSTAPPPQKATXXXXXAPAQPAQQGSAMGGFMANVASTGMGVMAGRAMDRAFFGG-GSAPAPEYAPEAESPAAPYEVTTDEQLPDSVCAREISEFKKCMERNGSDISACQWNIDVLAACQRQQQELGFANAGRL 176          
BLAST of Gchil7538.t1 vs. uniprot
Match: A0A7S1ERF7_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ERF7_9RHOD)

HSP 1 Score: 75.5 bits (184), Expect = 1.580e-13
Identity = 42/102 (41.18%), Postives = 62/102 (60.78%), Query Frame = 0
Query:   67 GSAMGGFMANVASTGLGVMAGRAMDRTFFGGSGSA--SEPISEPINAVDPASSEYSTEEPLPDTV---CAREMLEFKKCMERNGSDIGACQWNIDILSACQR 163
            GS +G F ANVAST  GV+ GRA+DRTFFGG   A   E  + P     PA S   ++    +++   C+ E+  F++C++ N +D  ACQ+N D+L+ CQ+
Sbjct:  111 GSMLGNFAANVASTATGVVVGRAIDRTFFGGGNHAPAEEQSAAPSENYTPAQSMMDSQNTATESIGGACSFELDNFRQCLKDNNNDTVACQFNYDMLTECQK 212          
BLAST of Gchil7538.t1 vs. uniprot
Match: A0A5J4Z6V0_PORPP (Coiled-coil-helix-coiled-coil-helix domain-containing protein 10, mitochondrial n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z6V0_PORPP)

HSP 1 Score: 68.2 bits (165), Expect = 8.400e-12
Identity = 43/101 (42.57%), Postives = 57/101 (56.44%), Query Frame = 0
Query:   70 MGGFMANVASTGLGVMAGRAMDRTFFGGSGSASEPISEPINAVDPASSEYSTE---EPLPDTVCAREMLEFKKCMERNGSDIGACQWNIDILSACQRQQQD 167
            M    AN  ST LGV AGRA+DRTFFGG GSA     +  +A + A  +Y++    +      C+ E  EF KC+E   SD  ACQW  D+LS CQ+  ++
Sbjct:    2 MAQIAANATSTALGVAAGRAIDRTFFGG-GSAPAAEGDTQDAEEAAPQQYASAGAPKAANGGACSFESSEFSKCLET--SDASACQWYFDLLSQCQQNAKE 99          
The following BLAST results are available for this feature:
BLAST of Gchil7538.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3J260_9FLOR3.490e-5964.97Mitochondrial intermembrane space cysteine motif-c... [more]
A0A7S1ERF7_9RHOD1.580e-1341.18Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A5J4Z6V0_PORPP8.400e-1242.57Coiled-coil-helix-coiled-coil-helix domain-contain... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..67
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 23..52
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 100..119
NoneNo IPR availablePANTHERPTHR13523:SF2COILED-COIL-HELIX-COILED-COIL-HELIX DOMAIN CONTAINING 2, ISOFORM A-RELATEDcoord: 1..166
NoneNo IPR availablePANTHERPTHR13523COILED-COIL-HELIX-COILED-COIL-HELIX DOMAIN CONTAINING 2/NUR77coord: 1..166

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000007_piloncontigtig00000007_pilon:1797262..1797792 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7538.t1Gchil7538.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000007_pilon 1797262..1797792 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7538.t1 ID=Gchil7538.t1|Name=Gchil7538.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=177bp
MPRRSSRPSGGRRPAPSRASARPAARSASTRSRPSPPPAQTRAKSTAPAS
QKSAAAPPPVAAQPQQGSAMGGFMANVASTGLGVMAGRAMDRTFFGGSGS
ASEPISEPINAVDPASSEYSTEEPLPDTVCAREMLEFKKCMERNGSDIGA
CQWNIDILSACQRQQQDLGFANASRL*
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