Gchil7080.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7080.t1
Unique NameGchil7080.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length339
Homology
BLAST of Gchil7080.t1 vs. uniprot
Match: A0A2V3ID66_9FLOR (Uncharacterized protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ID66_9FLOR)

HSP 1 Score: 133 bits (335), Expect = 8.560e-35
Identity = 72/128 (56.25%), Postives = 94/128 (73.44%), Query Frame = 0
Query:  173 DDTELVHLSSKVIGDDVGYDTGVNGEEGDEISRGAPFRKKRCRSNDSILLEDKIEKLVNITTSLVMVSQRQKTGFDGSNTQNRLEIVRAEIKCHSLQSEADNAEVTDMKDFVEKTSSKLFRKMKDNIN 300
            +D E++HL SKV+ +DVGY+ GV+G E DE +   P +KKR R ND+I LE+KIEKLV+ TTS  MVSQ QK  FDG   Q +L+I+RA IKC ++  EA++ EV  MK++V K S KLFRKMKDN+N
Sbjct:   21 EDKEIIHLFSKVMEEDVGYEVGVHGNEHDEHTSAGPAKKKR-RKNDAISLEEKIEKLVDNTTSTAMVSQIQKPKFDGLGVQQQLDIMRAGIKCRTVPGEAESEEVKKMKEYVSKMSWKLFRKMKDNVN 147          
BLAST of Gchil7080.t1 vs. uniprot
Match: A0A2V3IH30_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IH30_9FLOR)

HSP 1 Score: 121 bits (303), Expect = 4.010e-30
Identity = 66/121 (54.55%), Postives = 89/121 (73.55%), Query Frame = 0
Query:  173 DDTELVHLSSKVIGDDVGYDTGVNGEEGDEISRGAPFRKKRCRSNDSILLEDKIEKLVNITTSLVMVSQRQKTGFDGSNTQNRLEIVRAEIKCHSLQSEADNAEVTDMKDFVEKTSSKLFR 293
            +D E++HL SKV+ +DVGY+ GV+G E DE +   P +KKR R+ND+I LE+KIEKLV+ITTS  MVSQ QK  FDG   Q +L+I+RAEIKC ++  EA++ EV  MK+ V K S +LF+
Sbjct:   21 EDKEIIHLFSKVMEEDVGYEVGVHGNEHDEHTSAGPAKKKR-RANDAISLEEKIEKLVDITTSTAMVSQIQKPKFDGLGVQQQLDIMRAEIKCRTVSGEAESEEVKKMKECVGKMSWRLFQ 140          
BLAST of Gchil7080.t1 vs. uniprot
Match: A0A2V3IJP7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJP7_9FLOR)

HSP 1 Score: 87.8 bits (216), Expect = 1.660e-16
Identity = 49/116 (42.24%), Postives = 74/116 (63.79%), Query Frame = 0
Query:    1 MRNSSILLECCPEEEGLLEKLKQRERDLWTRDMDRVRSCVRIAQ------GESNSNAITTQAPPALDKEKSQNFSLDEFVRLVIFIHEEDIARKAMKRAVGSPLERRELDDRASRD 110
            +++S+++L+ CP++  LLE  +QRERDLWT  M+++R+ V  AQ       E     +    P  + K     F+LDEF RLV+ I +++ A+KA+ +AVG PL+RRELDDR  RD
Sbjct:  137 LQHSNVILQSCPDDAHLLELFEQRERDLWTSYMEQIRARVCEAQKTLHCEAEPEDLLLLRHKPNGVPK-----FTLDEFARLVLVIKDDETAQKAIMKAVGLPLDRRELDDRVGRD 247          
BLAST of Gchil7080.t1 vs. uniprot
Match: A0A2V3ITW4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITW4_9FLOR)

HSP 1 Score: 75.9 bits (185), Expect = 7.050e-14
Identity = 41/74 (55.41%), Postives = 51/74 (68.92%), Query Frame = 0
Query:  188 DVGYDTGVNGEEGDEISRGAPFRKKRCRSNDSILLEDKIEKLVNITTSLVMVSQRQKTGFDGSNTQNRLEIVRA 261
            DVGY+ G +  E DE  R  P +KKR   ND+I LE+KIEKL++ITTS  MVSQ QK  FDG   Q +L+I+RA
Sbjct:    4 DVGYEVGGHRNEHDEPMRAGPSKKKRRTKNDAISLEEKIEKLMDITTSTAMVSQIQKPKFDGLAVQQQLDIMRA 77          
The following BLAST results are available for this feature:
BLAST of Gchil7080.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3ID66_9FLOR8.560e-3556.25Uncharacterized protein n=2 Tax=Gracilariopsis cho... [more]
A0A2V3IH30_9FLOR4.010e-3054.55Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IJP7_9FLOR1.660e-1642.24Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ITW4_9FLOR7.050e-1455.41Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 258..278
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..315
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 333..338
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 316..332

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000131_piloncontigtig00000131_pilon:498173..499314 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7080.t1Gchil7080.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000131_pilon 498173..499314 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7080.t1 ID=Gchil7080.t1|Name=Gchil7080.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=339bp
MRNSSILLECCPEEEGLLEKLKQRERDLWTRDMDRVRSCVRIAQGESNSN
AITTQAPPALDKEKSQNFSLDEFVRLVIFIHEEDIARKAMKRAVGSPLER
RELDDRASRDDILVMVENRFNDTTLLNRADFSTVIENIESSRASPAHKSS
ALLKGHYQEARNDFTFFYEKYNDDTELVHLSSKVIGDDVGYDTGVNGEEG
DEISRGAPFRKKRCRSNDSILLEDKIEKLVNITTSLVMVSQRQKTGFDGS
NTQNRLEIVRAEIKCHSLQSEADNAEVTDMKDFVEKTSSKLFRKMKDNIN
KMLDEEVYQSFINDKLLIYVLLGCGQLAYMLVRMRRHL*
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