Gchil7020.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7020.t1
Unique NameGchil7020.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length786
Homology
BLAST of Gchil7020.t1 vs. uniprot
Match: A0A2V3J6Q1_9FLOR (Protein aardvark n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6Q1_9FLOR)

HSP 1 Score: 454 bits (1169), Expect = 2.460e-145
Identity = 347/755 (45.96%), Postives = 422/755 (55.89%), Query Frame = 0
Query:   55 ATQRYARATAQQAHATLRTAAQRAAFLHAVLGDASLAQQDALYDAALLAALHVRARELLRTTTAALHDAAASTERHHAXXXXXXXXXAVDALLALLTLFAAQWPLLLDVAARERERVLRAVMAAAHMTRRRERGAARVLGALRALCVTDDMRRRAMLHGVVSLTLRMHAAHAASRPIAVRAVALLANVAFGCAHRKRAIARAGAFDMLAAVLSNFPRDHALLLRVALAVRNXXXXXXXXXXXXXXXXXXXXXXXALLRFRAAAAHAPLRLQCVMALHTLCHDHQPNRHRLVRFHPCSPDLPVXXXXXXXXXXCHNPTHDAAAQVLDEHGDVVVDEEQPLASHLTPHFTHGAALSPGK-----------------------PLPAAXXXXXXXXXXXXXXXXXXXXXXXXXNHPPLTRAIIHTMRRDPDHALLLHTALSLLTLLALHHPDVQLAIAQQGALHVAVAAIKRXXXXXXXXXXXXXXXXXXXXXPANRTLLTSGLPVLISALNNHRAHPHVVCELAAALSNAVFENEKNSACVVNNRAIPAVILAMHHCPETDLMLLDAALCALRNFVHSSYSAALSAVNDAAIPAAVAALDRTKDAATHGQRVVQEQAVLFLLDLAELAPHAKKHMRTAQAADWIENALAKLPIHHYAELHSAADSLLAELAHPTHSDAPFANSRTASS-SQPPSAKPSFIPSRRLFGAFLLPRRAATTTDTRKRFVARSMPLTSPTADAPRKTKRLSKRLRFGTTLS 785
            AT  + RAT       L  +A RA+F+ +VLGD SLA  +A  DA LL  L  RA  ++R  +  L     ST+               DAL+ALL L A +WPLLLD+  +    +L  V       + R    +R L ALRA  VTD MRRR M  G++ LTL++   +  SR I  RA+ L+AN+AFGC HRK                                   XXXXXXXXXXXXXXXXXXXXX   +LRFR +  +  LR QC+MAL +LCH HQ NR RL+ F       P            ++        ++DEHGD+VVDEEQ L S +TPHF+HGAAL PGK                       PLPA                            P + RAIIH MRRDP+ A+LL TALS+LTL+ALH+  VQ  I   G + VAVAAIKR                      ANR L+TSGLPVLISAL +HR  P VV E+A+ALSNAVFE+EKN A VVN   +PA+I AM  C   D+M+LDA +CALRNFV SSYS ALSAV D A+ AA+ ALDRTKDA+T G+ +VQEQAVLFL+D+A LAP  KK M    AADWIENALAKL    Y +LH+AAD+LL+EL+        F  S+ A++ +Q  S K S  P R +FG FLLP+R+ATTTD RKRF  RSMPL     +  RK KRLS RLRF T LS
Sbjct:   45 ATITFVRATLANPKTALHNSAARASFIRSVLGDQSLAV-EADTDAPLLRQLQTRAAIIVREISTPLQ----STDDFD-----------TDALVALLALLAVKWPLLLDIVEQHGATLL--VKQTILRWQHRVSIISRCLTALRAFTVTDAMRRRVMFDGIIDLTLQLMDQYPNSRRIQDRALPLMANIAFGCPHRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASTILRFRGSTVNPELRFQCIMALESLCHQHQRNRQRLIEFDATPLSFPNTISSITTAPLSNSSNQQDEDDIVDEHGDLVVDEEQVLISDVTPHFSHGAALCPGKIVSNLVASPSVSSSTYSDRSPTSPLPAKGPPLDNEKQNAFIAEQEEQPSI---KKPSVVRAIIHAMRRDPNDAMLLETALSVLTLIALHNVQVQHTIGHFGGIQVAVAAIKRHPKHPAVATKASALIRCLCLQEANRRLITSGLPVLISALKDHRNVPDVVREVASALSNAVFESEKNRAWVVNKGGVPALIQAMSECGSKDVMVLDAGVCALRNFVDSSYSGALSAVKDGAVQAALDALDRTKDASTAGECIVQEQAVLFLVDVAALAPQTKKRMCDLDAADWIENALAKLKPDRYPDLHAAADNLLSELSEQE--SCKFGKSKPAAAENQSGSTKLSTKPPRGIFGGFLLPKRSATTTDVRKRFGGRSMPLGGNRNEPGRKGKRLSTRLRFTTHLS 776          
BLAST of Gchil7020.t1 vs. uniprot
Match: R7Q6L1_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q6L1_CHOCR)

HSP 1 Score: 362 bits (928), Expect = 9.040e-110
Identity = 283/743 (38.09%), Postives = 373/743 (50.20%), Query Frame = 0
Query:   70 TLRTAAQRAAFLHAVLGDASLAQQDALYDAALLAALHVRARELLRTTTAALHDAAASTERHHAXXXXXXXXXAVDALLALLTLFAAQWPLLLDVAARERERVLRAVMAAAHMTRRRERGAARVLGALRALCVTDDMRRRAMLHGVVSLTLRMHAAHAASRPIAVRAVALLANVAFGCAHRKRAIARAGAFDMLAAVLSNFPRDHALLLRVALAVRNXXXXXXXXXXXXXXXXXXXXXXXALLRFRAAAAH--APLRLQCVMALHTLCHDHQPNRHRLVRFHP---CSPDLPVXXXXXXXXXXCHNPTHDAAAQVLDEHGDVVVDEEQPLASHLTPHFTHGAALSPGK-PLPAAXXXXXXXXXXXXXXXXXXXXXXXXXNHP----------------PLTRAIIHTMRRDPDHALLLHTALSLLTLLALHHPDVQLAIAQQGALHVAVAAIKRXXXXXXXXXXXXXXXXXXXXXPANRTLLTSGLPVLISALNNHRAHPHVVCELAAALSNAVFENEKNSACVVNNRAIPAVILAMHHCPETDLMLLDAALCALRNFVHSSYSAALSAVNDAAIPAAVAALDRTKDAATHGQRVVQEQAVLFLLDLAELAPHAKKHMRTAQAADWIENALAKLPIHHYAELHSAADSLLAELAHPTHSDAPFANSRTASSSQPPSAKPSFIP--SRRLFGAFLLPRRAATTTD----TRKRFVARSMPLTSPTADAPRKTKRLSKRLRFGTTL 784
            TL  +  RA F++A+LGD  LA  DA  D  L   L  RA EL R  +  L  ++     H               +L+  TLFAA+WP+LLD   R     + +V+      R      AR L  LR   VTD MRR AM HG V L L + A HAA   +  RA   +ANVAFGC HRKR IAR  A   +   +  FP +  +    AL VRN                       ALLRFRA+++     LRLQCV+AL +LC     N  RL+        + D  V                D   ++L+E GDVVVDEE+ L    TPHF+HGAAL PG+ PL A+                                             + R++IHT+RRDPD  LLL T LSLLT L+L+  +VQ  I Q G +HVA+A+IKR                      +NR+L+TSGL VLI+ +        VV EL +ALSNAVF +EKN + V+N+  I +V+ A++ C   D+M+L+A LCALRNFV SS + ALSAV + AI AAV AL  TKDA++ GQR+VQEQAVLFL+D+A+LAP +   M    AADWIEN+LAKLP+  + ELH+A D L+  LA    +DAP  ++ T +  Q    +       SRR+F     PR + T         +    ++ P  +  + +  K KRLS+RLR    L
Sbjct:   57 TLFNSPARADFINALLGDTRLAH-DAEDDRVLHCQLATRAVELARQASIVLQASSPDESEH---------------VLSTFTLFAAKWPILLDDIVRTD--AVNSVVLCIRRLRTHPTVVARGLTVLRTFAVTDSMRRDAMFHGAVDLALELMAEHAADHRVQYRAAVFIANVAFGCTHRKRRIARQSAVAAVVRGMDTFPDNDRIQSAGALMVRNLTADAQVNQYIAGNEGAVEAVAAALLRFRASSSPRACELRLQCVLALESLCRHDDRNTQRLLNVDTLFMATGDSEVGLSLSPASR-AKRSGEDQVQELLNEDGDVVVDEEELLTLSETPHFSHGAALCPGRSPLVASVSSSAGSDKTIPSLGIERRTSCNNKGREVDEPAQLNEGGHAEKKSIMRSLIHTIRRDPDDTLLLETCLSLLTRLSLNRGEVQSKIGQLGGVHVAIASIKRHPKSKPVVSSASALIRCLCLQESNRSLVTSGLQVLIACVKEFFKDGDVVRELVSALSNAVFRHEKNRSWVINHGGIESVVQAVNQCGSKDVMVLEAGLCALRNFVDSSCNGALSAVEEGAIKAAVTALSITKDASSTGQRIVQEQAVLFLVDMAKLAPQSTDAMEAVDAADWIENSLAKLPLTQHPELHTAGDELINTLA----ADAPPGSAATDTEKQSSHQRERVERPMSRRIFARLSFPRVSVTKAPFGSIKSESPDKKASPRDNGASKSGSKVKRLSQRLRLSARL 776          
The following BLAST results are available for this feature:
BLAST of Gchil7020.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J6Q1_9FLOR2.460e-14545.96Protein aardvark n=1 Tax=Gracilariopsis chorda Tax... [more]
R7Q6L1_CHOCR9.040e-11038.09Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000225ArmadilloSMARTSM00185arm_5coord: 478..520
e-value: 62.0
score: 7.1
coord: 521..561
e-value: 14.0
score: 12.0
coord: 290..335
e-value: 8.8
score: 13.7
coord: 246..288
e-value: 20.0
score: 10.9
coord: 563..606
e-value: 6.3
score: 14.8
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 424..712
e-value: 4.6E-21
score: 76.9
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 179..347
e-value: 6.1E-11
score: 44.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..61
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 391..449
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 38..61
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 418..446
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..37
NoneNo IPR availablePANTHERPTHR22895UNCHARACTERIZEDcoord: 448..637
coord: 84..334
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 191..346
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 444..676

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000131_piloncontigtig00000131_pilon:50142..52499 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7020.t1Gchil7020.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000131_pilon 50142..52499 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7020.t1 ID=Gchil7020.t1|Name=Gchil7020.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=786bp
MSSPSPPPSSPPSSPSPPSSPSSPSSPSSPSPSPPPSLDSASDTERDAPS
SSALATQRYARATAQQAHATLRTAAQRAAFLHAVLGDASLAQQDALYDAA
LLAALHVRARELLRTTTAALHDAAASTERHHAERHHAERHNAVDALLALL
TLFAAQWPLLLDVAARERERVLRAVMAAAHMTRRRERGAARVLGALRALC
VTDDMRRRAMLHGVVSLTLRMHAAHAASRPIAVRAVALLANVAFGCAHRK
RAIARAGAFDMLAAVLSNFPRDHALLLRVALAVRNLAHGSQLNQFVAANA
GIVDALAAALLRFRAAAAHAPLRLQCVMALHTLCHDHQPNRHRLVRFHPC
SPDLPVPDLPVSDLPVCHNPTHDAAAQVLDEHGDVVVDEEQPLASHLTPH
FTHGAALSPGKPLPAAAPSPSASTTTSATSATSATSATSATNHPPLTRAI
IHTMRRDPDHALLLHTALSLLTLLALHHPDVQLAIAQQGALHVAVAAIKR
HPHHTSIATAAAALIRCLCVHPANRTLLTSGLPVLISALNNHRAHPHVVC
ELAAALSNAVFENEKNSACVVNNRAIPAVILAMHHCPETDLMLLDAALCA
LRNFVHSSYSAALSAVNDAAIPAAVAALDRTKDAATHGQRVVQEQAVLFL
LDLAELAPHAKKHMRTAQAADWIENALAKLPIHHYAELHSAADSLLAELA
HPTHSDAPFANSRTASSSQPPSAKPSFIPSRRLFGAFLLPRRAATTTDTR
KRFVARSMPLTSPTADAPRKTKRLSKRLRFGTTLS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000225Armadillo
IPR011989ARM-like
IPR016024ARM-type_fold