Gchil7046.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male
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Overview
Homology
BLAST of Gchil7046.t1 vs. uniprot
Match: A0A2V3J6X0_9FLOR (RNA polymerase sigma factor SigA n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6X0_9FLOR) HSP 1 Score: 387 bits (994), Expect = 2.620e-132 Identity = 194/272 (71.32%), Postives = 230/272 (84.56%), Query Frame = 0
Query: 76 HANELNPLPPAHWHLIVGQRNELVIKWLWLVGAVARKSHQIFISAFPEAEPVISFSDLVQEGVIGLITAVERWDGSKNQPFDTYAFYTVKYSILRAIQNQARPIRLPVHVLNKLSKIRTVRHQLQRAGGNQVSLSEVARLAGVDRKAAQLYLERSQAMLSIDIPVRQSNSGPDAPPLRDFLVDHSXXXXXXXXXXXXXXAVAELIRSSPLEELERSVLWLKFGLGDGVGRLRTEVSRILDVRVHTVKRAELSALKKLREVVSDDISNWAELM 347
HA+ NPLPP WHLI+ QRN+LV+KWLWLV AVARK+HQIF+SAFPEA P +S SDLVQEGV GLITAVER+D S+ QPFD+YAFY++KY+ILRAIQNQARPIRLPVHVLNKLSKIRTVRHQLQ A G VSLS+VA+LA VDR+AA+LY++RS+++ SID P+ + +S DAPPLRDFLVDHS AVAEL++S+ LEELER+VLWLK+GLGDG+ R+R EVSRILDVRVHTVKRAEL AL KLREVV++D+SNWAEL+
Sbjct: 3 HASRTNPLPPHDWHLILRQRNQLVVKWLWLVYAVARKTHQIFLSAFPEAAPALSMSDLVQEGVCGLITAVERFDASRGQPFDSYAFYSIKYAILRAIQNQARPIRLPVHVLNKLSKIRTVRHQLQIANGKPVSLSQVAQLAQVDREAAKLYIQRSRSLWSIDTPIHR-HSQRDAPPLRDFLVDHSVDVSRHVESMCTREAVAELVQSTELEELERNVLWLKYGLGDGIERVRAEVSRILDVRVHTVKRAELRALNKLREVVTEDVSNWAELI 273
BLAST of Gchil7046.t1 vs. uniprot
Match: R7QRB1_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QRB1_CHOCR) HSP 1 Score: 230 bits (587), Expect = 2.070e-71 Identity = 125/220 (56.82%), Postives = 159/220 (72.27%), Query Frame = 0
Query: 128 ISFSDLVQEGVIGLITAVERWDGSKNQPFDTYAFYTVKYSILRAIQNQARPIRLPVHVLNKLSKIRTVRHQLQRA-GGNQVSLSEVARLAGVDRKAAQLYLERSQAMLSIDIPVRQSNSGPDAPPLRDFLVDHSXXXXXXXXXXXXXXAVAELIRSSPLEELERSVLWLKFGLGDGVGRLRTEVSRILDVRVHTVKRAELSALKKLREVVSDDISNWAEL 346
+S D+ QEGV GL+TAVERWD +K+ FD +AFY++K++ILRAI+NQ+RPIRLPVHVLNKLSK+R ++ Q+ + GG + S+ EVARLAGV K A+LYL+RS+ + SID PVR G +A LR+FLVD S AV EL++ + LEELERSVL LK+GL DGV R+R EVSRILDVRV V+RAELSAL+KLR +D + W L
Sbjct: 5 LSLGDMTQEGVCGLMTAVERWDPAKDYAFDAFAFYSIKHAILRAIENQSRPIRLPVHVLNKLSKMRKIKQQVDLSKGGREPSVQEVARLAGVGYKEAELYLDRSKTLRSIDAPVR---GGAEAS-LREFLVDESVDVARQVERACSREAVQELVKGTDLEELERSVLLLKYGLSDGVERVRAEVSRILDVRVEKVRRAELSALRKLRVTAGEDWAGWTGL 220
BLAST of Gchil7046.t1 vs. uniprot
Match: A0A4P5VE37_9CYAN (RNA polymerase sigma factor n=1 Tax=Cyanobium sp. TaxID=2164130 RepID=A0A4P5VE37_9CYAN) HSP 1 Score: 120 bits (302), Expect = 5.780e-28 Identity = 85/256 (33.20%), Postives = 126/256 (49.22%), Query Frame = 0
Query: 83 LPPAHWHLIVGQ----RNELVIKWLWLVGAVARKSHQIFISAFPEAEPVISFSDLVQEGVIGLITAVERWDGSKNQPFDTYAFYTVKYSILRAIQNQARPIRLPVHVLNKLSKIRTVRHQLQRAGGNQVSLSEVARLAGVDRKAAQLYLERSQAMLSIDIPVRQSNSGPDAPPLRDFLVDHSXXXXXXXXXXXXXXAVAELIRSSPLEELERSVLWLKFGLGDGVGRLRTEVSRILDVRVHTVKRAELSALKKLRE 334
L P+ L + Q + ++ L LV AVA+K Q + DLVQEG +GL AVER+D ++ F TYA++ ++ I RAI +Q+R IRLPVH+ KL++++ + +L G SL+E+A GV +L ++R +S+D PV Q LRD L DH + L+ L E SV+ L+FGL D R TE+ + + V++ E SAL KLR+
Sbjct: 68 LKPSELRLALHQGRRAKERMIQANLRLVVAVAKKYQQ----------RGLELLDLVQEGTLGLERAVERFDPTRGFRFSTYAYWWIRQGITRAIASQSRSIRLPVHITEKLNRLKRAQRELSLRLGRSPSLAELALELGVSEDTVRLIMQRQPQAISLDRPVGQGQE----TDLRDLLEDHHPTPEQVLTRAQLRADLMALLEE--LSSREASVIRLRFGLEDDTPRTLTEIGEQMGISRERVRQIEASALLKLRQ 307
BLAST of Gchil7046.t1 vs. uniprot
Match: A0A7V6CMY5_9BACT (RNA polymerase sigma factor n=2 Tax=candidate division WOR-3 bacterium TaxID=2052148 RepID=A0A7V6CMY5_9BACT) HSP 1 Score: 122 bits (305), Expect = 3.360e-27 Identity = 74/243 (30.45%), Postives = 129/243 (53.09%), Query Frame = 0
Query: 91 IVGQRNELVIKWLWLVGAVARKSHQIFISAFPEAEPVISFSDLVQEGVIGLITAVERWDGSKNQPFDTYAFYTVKYSILRAIQNQARPIRLPVHVLNKLSKIRTVRHQLQRAGGNQVSLSEVARLAGVDRKAAQLYLERSQAMLSIDIPVRQSNSGPDAPPLRDFLVDHSXXXXXXXXXXXXXXAVAELIRSSPLEELERSVLWLKFGLGDGVGRLRTEVSRILDVRVHTVKRAELSALKKLR 333
I+ R++++ + LV ++A+K A + FSDLV+EG +GLI AVE+++ K F TYA + +K +I RA+ Q++ +R+P H+ + ++KI H+ + G + ++SE+A+ G+ ++ + Y + Q +S+D P+ SG + DF+ D E I + L + E +L L+FG+GDG+ R EV +I ++ V++ E ALKKLR
Sbjct: 285 ILFARDKMISGNVRLVVSIAKKY----------ANRGLEFSDLVEEGNVGLIKAVEKFNYKKGYKFSTYATWWIKQAITRALAEQSKTVRIPAHIQDAINKITRAHHKFIQTYGREPTVSELAQRLGMSKEKIERYQKIVQHGVSLDKPIDDEESGF----IGDFMADEKSTSPARKAGIALLNEKLEKILQTYLSKREEKILKLRFGIGDGIQRTLEEVGQIFNITRERVRQIEAKALKKLR 513
BLAST of Gchil7046.t1 vs. uniprot
Match: A0A7C5PPT3_9BACT (RNA polymerase sigma factor RpoD n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C5PPT3_9BACT) HSP 1 Score: 118 bits (296), Expect = 1.070e-26 Identity = 77/226 (34.07%), Postives = 125/226 (55.31%), Query Frame = 0
Query: 128 ISFSDLVQEGVIGLITAVERWDGSKNQPFDTYAFYTVKYSILRAIQNQARPIRLPVHVLNKLSKIRTVRHQLQRAGGNQVSLSEVARLAGVDRKAAQLYLERSQAMLSIDIPVRQSNSGPDAPPLRDFLVDHSXXXXXXXXXXXXXXAVAELIRSSPLEEL------ERSVLWLKFGLGDGVGRLRTEVSRILDVRVHTVKRAELSALKKLREVV-SDDISNWAEL 346
+SF DL+QEG GL+ AVE+++ + F TYA + ++ +I R+I +QAR IR+PVH++ +SK+R V+ +L +A G + ++ EVA AG+ + A+ + S+ +S+D P+ S D DF+ D S A E+++ E L ER ++ L++GLGDG EV RI V V++ E AL+KL+ V + +SN+ E+
Sbjct: 148 LSFLDLIQEGNTGLMKAVEKYEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETMSKLRNVQKKLVQAKGREPTIEEVAEAAGISVEEAKRVTKISKHPISLDRPIGDS----DDSYFGDFIEDDSAVAPAQA-------ASGEMLKERIREVLNTLTFREREIIKLRYGLGDGYTYTLEEVGRIFRVTRERVRQIEAKALRKLQHPVRARQLSNFLEI 362
BLAST of Gchil7046.t1 vs. uniprot
Match: A0A1V5KD86_9BACT (RNA polymerase sigma factor SigA n=2 Tax=Bacteria candidate phyla TaxID=1783234 RepID=A0A1V5KD86_9BACT) HSP 1 Score: 119 bits (298), Expect = 3.960e-26 Identity = 79/239 (33.05%), Postives = 123/239 (51.46%), Query Frame = 0
Query: 95 RNELVIKWLWLVGAVARKSHQIFISAFPEAEPVISFSDLVQEGVIGLITAVERWDGSKNQPFDTYAFYTVKYSILRAIQNQARPIRLPVHVLNKLSKIRTVRHQLQRAGGNQVSLSEVARLAGVDRKAAQLYLERSQAMLSIDIPVRQSNSGPDAPPLRDFLVDHSXXXXXXXXXXXXXXAVAELIRSSPLEELERSVLWLKFGLGDGVGRLRTEVSRILDVRVHTVKRAELSALKKLR 333
R ELV+ L LV ++A+K +SF DL+QEG IGL+ AVER++ + F TYA + ++ +I RAI +QAR IR+PVH++ ++K+ V Q + G + E+A+ G+ + + L+ SQ +S++ P+ + L DF+ D E + + L+E E VL L+FG+GDGV EV +I V V++ E AL+KLR
Sbjct: 341 RKELVVANLRLVVSIAKKY----------INKGLSFLDLIQEGNIGLMRAVERFEYKRGYKFSTYATWWIRQAITRAIADQARTIRIPVHMIETINKLNKVARQFVQQYGREPKPEEIAKKMGMSAEKVRSVLKISQHPISLETPIGEEKDSH----LGDFIEDKDAISPAAAAVNVLLKEQIEKVLHT-LKEREAEVLRLRFGIGDGVPHTLEEVGKIFKVTRERVRQIEAKALRKLR 564
BLAST of Gchil7046.t1 vs. uniprot
Match: D3T358_THEIA (RNA polymerase, sigma 70 subunit, RpoD subfamily n=2 Tax=Thermoanaerobacter TaxID=1754 RepID=D3T358_THEIA) HSP 1 Score: 114 bits (284), Expect = 7.870e-26 Identity = 73/207 (35.27%), Postives = 112/207 (54.11%), Query Frame = 0
Query: 128 ISFSDLVQEGVIGLITAVERWDGSKNQPFDTYAFYTVKYSILRAIQNQARPIRLPVHVLNKLSKIRTVRHQLQRAGGNQVSLSEVARLAGVDRKAAQLYLERSQAMLSIDIPVRQSNSGPDAPPLRDFLVDHSXXXXXXXXXXXXXXAVAELIRSSPLEELERSVLWLKFGLGDGVGRLRTEVSRILD-VRVHTVKRAELSALKKLR 333
ISF DL+QEG +GL+ AVER+D K F TYA + +K +I RAI +QAR IR+PVH++ ++K+ ++ Q + G + S+ E+A + K A++ LE Q ++S++ PV + +G L D + D + + S+ L E VL L+FGL DG R EV + L + V++ E ALK+LR
Sbjct: 60 ISFPDLIQEGNLGLLKAVERFDYRKGYKFSTYATWWIKQTITRAIADQARTIRIPVHMVESVNKLLKIQKQFLQKLGREPSIEEIAEEMNISEKKAKVLLEIVQGIVSLEEPVGEDENGK----LGDIIADKEAVDPVEELESMLLKEQVDEVLST-LAPREEKVLRLRFGLDDGKIRTLEEVGKELGGISRERVRQIETKALKRLR 261
BLAST of Gchil7046.t1 vs. uniprot
Match: Q8S9C9_CYAPA (RNA polymerase sigma factor n=1 Tax=Cyanophora paradoxa TaxID=2762 RepID=Q8S9C9_CYAPA) HSP 1 Score: 117 bits (292), Expect = 7.950e-26 Identity = 79/241 (32.78%), Postives = 128/241 (53.11%), Query Frame = 0
Query: 95 RNELVIKWLWLVGAVARKSHQIFISAFPEAEPVISFSDLVQEGVIGLITAVERWDGSKNQPFDTYAFYTVKYSILRAIQNQARPIRLPVHVLNKLSKIRTVRHQLQRAGGNQVSLSEVARLAGVDRKAAQLYLERSQAM--LSIDIPVRQSNSGPDAPPLRDFLVDHSXXXXXXXXXXXXXXAVAELIRSSPLEELERSVLWLKFGLGDGVGRLRTEVSRILDVRVHTVKRAELSALKKLR 333
R+ LV L V AVA+K H+ +S DL+QEG IGLI AVE++D F TYA + ++ +I R+IQN +R IRLP H K+++I+ L R+ G Q + +E+A G+D + ++E + A+ +S+D+P+ +S++ + + DF+ + +VA + + L E E VL ++FGL DG + +V L V V++ E+ AL+KLR
Sbjct: 188 RDRLVRANLRWVVAVAKKYHK--------QRGTMSMQDLIQEGNIGLIRAVEKFDPRMGYRFTTYATWWIRQAITRSIQNSSREIRLPAHRHEKINRIKRATVALSRSLGRQPTEAEIAEHVGLDPSRMRKFVESAAAVATVSLDVPINESDN--QSATIGDFIRSENEGPADRAERELMRESVARTLAKA-LSEREYMVLRMRFGLDDGEPKTLNQVGETLGVTRERVRQIEMKALRKLR 417
BLAST of Gchil7046.t1 vs. uniprot
Match: A0A6P0T449_9CYAN (RNA polymerase sigma factor, RpoD/SigA family n=1 Tax=Cyanothece sp. SIO2G6 TaxID=2607797 RepID=A0A6P0T449_9CYAN) HSP 1 Score: 114 bits (286), Expect = 1.020e-25 Identity = 73/211 (34.60%), Postives = 109/211 (51.66%), Query Frame = 0
Query: 128 ISFSDLVQEGVIGLITAVERWDGSKNQPFDTYAFYTVKYSILRAIQNQARPIRLPVHVLNKLSKIRTVRHQLQRAGGNQVSLSEVARLAGVDRKAAQLYLERSQAMLSIDIPVRQSNSGPDAPPLRDFLVDHSXXXXXXXXXXXXXXAVAELIRSSPLEELERSVLWLKFGLGDGVGRLRTEVSRILDVRVHTVKRAELSALKKLREVVSD 338
+ DL+QEG IG+ VE++D SK F TYA++ ++ +I RAI + R IRLP+H+ KL+KI+ V+ QL + G S+ E+A + K + YLERS+ LS+DI V + L D L D +++LI S L +R VL L+FGL DG ++ + + V++ E AL KLR+ D
Sbjct: 108 VDLLDLIQEGTIGMQRGVEKFDPSKGYRFSTYAYWWIRQAITRAIAEKGRTIRLPIHITEKLNKIKKVQRQLAQQYGRSASVEEIATEMKLTTKQIRDYLERSRLPLSLDIRVGDNQD----TELGDLLEDDGQSPEEYAAHADLRSQLSQLI--SDLTPQQREVLSLRFGLEDGKTMTLAKIGSRMQISRERVRQIEREALTKLRKRQGD 312
BLAST of Gchil7046.t1 vs. uniprot
Match: D1C4W5_SPHTD (RNA polymerase sigma factor n=2 Tax=Sphaerobacter TaxID=2056 RepID=D1C4W5_SPHTD) HSP 1 Score: 114 bits (286), Expect = 1.510e-25 Identity = 75/225 (33.33%), Postives = 120/225 (53.33%), Query Frame = 0
Query: 128 ISFSDLVQEGVIGLITAVERWDGSKNQPFDTYAFYTVKYSILRAIQNQARPIRLPVHVLNKLSKIRTVRHQLQRAGGNQVSLSEVARLAGVDRKAAQLYLERSQAMLSIDIPVRQSNSGPDAPPLRDFLVDHSXXXXXXXXXXXXXXAVAELIR---SSPLEEL---ERSVLWLKFGLGDGVGRLRTEVSRILDVRVHTVKRAELSALKKLREVVSDDISNWAEL 346
+S DL+QEG +GLI AV+++D + F TYA + ++ +I RAI +Q R IRLPVH+++ +++ R QL + G EVA V + + ++ +Q +S++ P+ + G L D + D AV L++ + LEEL ER VL L+FGLG+G +EV + LD+ V++ E AL+KLR +D ++ +AEL
Sbjct: 128 LSLLDLIQEGNLGLIRAVQKYDWRRGYRFSTYATWWIRQAITRAIADQGRTIRLPVHMIDSITRYRRTVMQLTQELGRPPRAEEVAEAMSVPPEKVEQFIRAAQRTISLEKPIGEDEEGT----LADLIADE-------VARSPEEEAVETLLQRDVAEVLEELTPRERLVLQLRFGLGNGSPHTLSEVGQQLDISRERVRQIESEALRKLRRRAADRLAAYAEL 341 The following BLAST results are available for this feature:
BLAST of Gchil7046.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gchil7046.t1 ID=Gchil7046.t1|Name=Gchil7046.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=348bpback to top |