Gchil7076.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7076.t1
Unique NameGchil7076.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length391
Homology
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BLAST of Gchil7076.t1 vs. uniprot
Match: A0A2V3J6K4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6K4_9FLOR)

HSP 1 Score: 296 bits (759), Expect = 1.700e-94
Identity = 225/400 (56.25%), Postives = 280/400 (70.00%), Query Frame = 0 
Query:    1 MRSPSSRFLLLVASLLLCERSVVQAQQLRTIPNTPDNQEFFALTQSLFMEGVLSTSSCDSQRSNIEQCIRTCNSPGPRERNGCCCVI-DNSNSTSKFYIGLRGGCRYNQRLLKFT--DSFIYESSPINSNMPFFDQVTCASTAENANDNSCTCTLVWEASASELAEMPPIPTPSPSSSXXXVTSPTMSTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSGFGPAPGGNV-SPTAELDPSPSPDDD--------SVCVDQKYLLDRGFSAEHLVHNGGISSTVLCPQHSQLPCASLNHKVRFNGVDMSYRQLCEHEVMACQRDEMLVNSVFSHLWDEARHGEVMLTMFDTRYAEVAQKGLHSVMHALRTVRKR 388
            MRS +  F+ LV   L        AQQ R+IP TP+NQ+FFAL+QSL  +G  S SSC  QR ++ +CI+ CN+PGP+ER GCCC++ DNS     F++G+RGGCRYNQ +L+F+  D+FIY+S+ INS+ P FD+ +CA T ENAN  SCTCTL WEA+A  LA + P+PTPS             S  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    GP     V      ++PS SP D         +VCVD +YL++ G+  EHL+H  G+ S VLCP+++QLPC S NH +R NGV MSY QLC+   + C+ D + VNSV++HLW+E  HG+ +LTM+D RY E AQ+ LHSVMH +RTVRKR
Sbjct:    1 MRSIAPLFIALVLLFL----RQASAQQFRSIPTTPENQQFFALSQSLLDQGDFSQSSCGPQRPDLIECIQRCNAPGPKEREGCCCIVADNS-----FFVGIRGGCRYNQTILRFSSNDNFIYQSTTINSDKPNFDKTSCAFTEENANRESCTCTLQWEATADRLAAVSPLPTPS------------NSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPTDDQTVVDMDGSVEPSISPGDXXXXXXXXXTVCVDHQYLINAGYPTEHLIHGDGVMSPVLCPRNTQLPCGSANHMIRANGVSMSYLQLCDSPAVECESDHIKVNSVYTHLWNEVAHGDHVLTMYDIRYPERAQRALHSVMHKMRTVRKR 379
The following BLAST results are available for this feature:
BLAST of Gchil7076.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J6K4_9FLOR1.700e-9456.25Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 211..225
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 178..204
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 161..270
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 226..240
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..25
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..390
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..18

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000131_piloncontigtig00000131_pilon:466245..467417 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7076.t1Gchil7076.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000131_pilon 466245..467417 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7076.t1 ID=Gchil7076.t1|Name=Gchil7076.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=391bp
MRSPSSRFLLLVASLLLCERSVVQAQQLRTIPNTPDNQEFFALTQSLFME
GVLSTSSCDSQRSNIEQCIRTCNSPGPRERNGCCCVIDNSNSTSKFYIGL
RGGCRYNQRLLKFTDSFIYESSPINSNMPFFDQVTCASTAENANDNSCTC
TLVWEASASELAEMPPIPTPSPSSSPSPVTSPTMSTSTLPSMEPTVTPAV
DPTISSAISPPVEPAGPPTVITPPNGITTPTPTDVSTPLPTEDSGFGPAP
GGNVSPTAELDPSPSPDDDSVCVDQKYLLDRGFSAEHLVHNGGISSTVLC
PQHSQLPCASLNHKVRFNGVDMSYRQLCEHEVMACQRDEMLVNSVFSHLW
DEARHGEVMLTMFDTRYAEVAQKGLHSVMHALRTVRKRVV*
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