Gchil7076.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGchil7076.t1
Unique NameGchil7076.t1
TypemRNA
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length391
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000131_piloncontigtig00000131_pilon:466245..467417 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7076Gchil7076Gracilaria chilensis NLEC103_M9 malegenetig00000131_pilon 466245..467417 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7076.t1.stop1Gchil7076.t1.stop1Gracilaria chilensis NLEC103_M9 malestop_codontig00000131_pilon 466245..466247 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7076.t1.CDS1Gchil7076.t1.CDS1Gracilaria chilensis NLEC103_M9 maleCDStig00000131_pilon 466245..467417 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7076.t1.exon1Gchil7076.t1.exon1Gracilaria chilensis NLEC103_M9 maleexontig00000131_pilon 466245..467417 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7076.t1.start1Gchil7076.t1.start1Gracilaria chilensis NLEC103_M9 malestart_codontig00000131_pilon 467415..467417 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7076.t1Gchil7076.t1Gracilaria chilensis NLEC103_M9 malepolypeptidetig00000131_pilon 466245..467417 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gchil7076.t1 ID=Gchil7076.t1|Name=Gchil7076.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=391bp
MRSPSSRFLLLVASLLLCERSVVQAQQLRTIPNTPDNQEFFALTQSLFME
GVLSTSSCDSQRSNIEQCIRTCNSPGPRERNGCCCVIDNSNSTSKFYIGL
RGGCRYNQRLLKFTDSFIYESSPINSNMPFFDQVTCASTAENANDNSCTC
TLVWEASASELAEMPPIPTPSPSSSPSPVTSPTMSTSTLPSMEPTVTPAV
DPTISSAISPPVEPAGPPTVITPPNGITTPTPTDVSTPLPTEDSGFGPAP
GGNVSPTAELDPSPSPDDDSVCVDQKYLLDRGFSAEHLVHNGGISSTVLC
PQHSQLPCASLNHKVRFNGVDMSYRQLCEHEVMACQRDEMLVNSVFSHLW
DEARHGEVMLTMFDTRYAEVAQKGLHSVMHALRTVRKRVV*
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spliced messenger RNA

>Gchil7076.t1 ID=Gchil7076.t1|Name=Gchil7076.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1173bp|location=Sequence derived from alignment at tig00000131_pilon:466245..467417- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCGTTCTCCGTCATCCCGCTTTTTGCTTCTCGTCGCATCGCTGCTGCT
GTGTGAACGTTCCGTCGTGCAAGCGCAACAGCTACGCACCATTCCGAATA
CCCCGGACAATCAGGAGTTCTTTGCGCTCACTCAGTCGCTCTTCATGGAG
GGAGTCCTGTCAACATCCTCGTGCGACTCGCAGCGCTCCAATATCGAACA
GTGTATTAGAACCTGCAACTCTCCCGGCCCTCGGGAACGAAACGGCTGTT
GCTGCGTCATAGACAACTCAAACTCTACATCGAAATTCTACATCGGACTT
CGCGGAGGCTGCCGGTACAACCAACGACTGCTGAAATTCACAGATTCCTT
CATTTACGAAAGCTCGCCGATCAACTCCAACATGCCGTTTTTTGATCAGG
TTACGTGCGCGTCTACCGCGGAGAACGCCAATGATAATAGCTGCACTTGT
ACGTTGGTATGGGAGGCTTCTGCAAGCGAACTTGCCGAAATGCCGCCCAT
TCCTACTCCATCCCCCTCAAGCAGCCCATCGCCTGTGACTTCTCCCACAA
TGAGCACCTCCACCCTCCCTTCCATGGAGCCCACCGTGACACCGGCCGTT
GATCCTACCATAAGTTCTGCAATCAGTCCTCCCGTTGAGCCTGCCGGACC
CCCGACCGTTATCACTCCGCCCAATGGTATCACCACGCCCACGCCAACTG
ATGTCTCAACTCCATTGCCCACGGAAGATTCGGGATTCGGTCCGGCCCCC
GGTGGGAATGTAAGTCCGACTGCTGAGCTAGATCCATCCCCTTCCCCGGA
CGATGATTCCGTATGCGTCGATCAGAAGTACCTGCTCGACCGTGGGTTTT
CAGCAGAGCATCTCGTGCATAATGGAGGAATTTCATCAACTGTGTTGTGT
CCACAACACTCGCAATTACCGTGCGCTTCTCTTAACCACAAGGTGCGCTT
CAATGGAGTAGACATGAGCTACCGTCAGCTTTGTGAACATGAAGTGATGG
CATGTCAGCGCGACGAGATGCTGGTCAATTCTGTGTTCTCGCATCTCTGG
GATGAGGCGCGACATGGCGAAGTGATGCTTACAATGTTTGACACGCGTTA
TGCGGAGGTTGCCCAAAAAGGCTTGCACTCTGTCATGCACGCGCTTCGTA
CCGTTCGGAAGCGCGTTGTGTAG
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protein sequence of Gchil7076.t1

>Gchil7076.t1 ID=Gchil7076.t1|Name=Gchil7076.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=391bp
MRSPSSRFLLLVASLLLCERSVVQAQQLRTIPNTPDNQEFFALTQSLFME
GVLSTSSCDSQRSNIEQCIRTCNSPGPRERNGCCCVIDNSNSTSKFYIGL
RGGCRYNQRLLKFTDSFIYESSPINSNMPFFDQVTCASTAENANDNSCTC
TLVWEASASELAEMPPIPTPSPSSSPSPVTSPTMSTSTLPSMEPTVTPAV
DPTISSAISPPVEPAGPPTVITPPNGITTPTPTDVSTPLPTEDSGFGPAP
GGNVSPTAELDPSPSPDDDSVCVDQKYLLDRGFSAEHLVHNGGISSTVLC
PQHSQLPCASLNHKVRFNGVDMSYRQLCEHEVMACQRDEMLVNSVFSHLW
DEARHGEVMLTMFDTRYAEVAQKGLHSVMHALRTVRKRVV*
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mRNA from alignment at tig00000131_pilon:466245..467417-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gchil7076.t1 ID=Gchil7076.t1|Name=Gchil7076.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1173bp|location=Sequence derived from alignment at tig00000131_pilon:466245..467417- (Gracilaria chilensis NLEC103_M9 male)
ATGCGTTCTCCGTCATCCCGCTTTTTGCTTCTCGTCGCATCGCTGCTGCT
GTGTGAACGTTCCGTCGTGCAAGCGCAACAGCTACGCACCATTCCGAATA
CCCCGGACAATCAGGAGTTCTTTGCGCTCACTCAGTCGCTCTTCATGGAG
GGAGTCCTGTCAACATCCTCGTGCGACTCGCAGCGCTCCAATATCGAACA
GTGTATTAGAACCTGCAACTCTCCCGGCCCTCGGGAACGAAACGGCTGTT
GCTGCGTCATAGACAACTCAAACTCTACATCGAAATTCTACATCGGACTT
CGCGGAGGCTGCCGGTACAACCAACGACTGCTGAAATTCACAGATTCCTT
CATTTACGAAAGCTCGCCGATCAACTCCAACATGCCGTTTTTTGATCAGG
TTACGTGCGCGTCTACCGCGGAGAACGCCAATGATAATAGCTGCACTTGT
ACGTTGGTATGGGAGGCTTCTGCAAGCGAACTTGCCGAAATGCCGCCCAT
TCCTACTCCATCCCCCTCAAGCAGCCCATCGCCTGTGACTTCTCCCACAA
TGAGCACCTCCACCCTCCCTTCCATGGAGCCCACCGTGACACCGGCCGTT
GATCCTACCATAAGTTCTGCAATCAGTCCTCCCGTTGAGCCTGCCGGACC
CCCGACCGTTATCACTCCGCCCAATGGTATCACCACGCCCACGCCAACTG
ATGTCTCAACTCCATTGCCCACGGAAGATTCGGGATTCGGTCCGGCCCCC
GGTGGGAATGTAAGTCCGACTGCTGAGCTAGATCCATCCCCTTCCCCGGA
CGATGATTCCGTATGCGTCGATCAGAAGTACCTGCTCGACCGTGGGTTTT
CAGCAGAGCATCTCGTGCATAATGGAGGAATTTCATCAACTGTGTTGTGT
CCACAACACTCGCAATTACCGTGCGCTTCTCTTAACCACAAGGTGCGCTT
CAATGGAGTAGACATGAGCTACCGTCAGCTTTGTGAACATGAAGTGATGG
CATGTCAGCGCGACGAGATGCTGGTCAATTCTGTGTTCTCGCATCTCTGG
GATGAGGCGCGACATGGCGAAGTGATGCTTACAATGTTTGACACGCGTTA
TGCGGAGGTTGCCCAAAAAGGCTTGCACTCTGTCATGCACGCGCTTCGTA
CCGTTCGGAAGCGCGTTGTGTAG
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Coding sequence (CDS) from alignment at tig00000131_pilon:466245..467417-

>Gchil7076.t1 ID=Gchil7076.t1|Name=Gchil7076.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=1173bp|location=Sequence derived from alignment at tig00000131_pilon:466245..467417- (Gracilaria chilensis NLEC103_M9 male)
ATGCGTTCTCCGTCATCCCGCTTTTTGCTTCTCGTCGCATCGCTGCTGCT
GTGTGAACGTTCCGTCGTGCAAGCGCAACAGCTACGCACCATTCCGAATA
CCCCGGACAATCAGGAGTTCTTTGCGCTCACTCAGTCGCTCTTCATGGAG
GGAGTCCTGTCAACATCCTCGTGCGACTCGCAGCGCTCCAATATCGAACA
GTGTATTAGAACCTGCAACTCTCCCGGCCCTCGGGAACGAAACGGCTGTT
GCTGCGTCATAGACAACTCAAACTCTACATCGAAATTCTACATCGGACTT
CGCGGAGGCTGCCGGTACAACCAACGACTGCTGAAATTCACAGATTCCTT
CATTTACGAAAGCTCGCCGATCAACTCCAACATGCCGTTTTTTGATCAGG
TTACGTGCGCGTCTACCGCGGAGAACGCCAATGATAATAGCTGCACTTGT
ACGTTGGTATGGGAGGCTTCTGCAAGCGAACTTGCCGAAATGCCGCCCAT
TCCTACTCCATCCCCCTCAAGCAGCCCATCGCCTGTGACTTCTCCCACAA
TGAGCACCTCCACCCTCCCTTCCATGGAGCCCACCGTGACACCGGCCGTT
GATCCTACCATAAGTTCTGCAATCAGTCCTCCCGTTGAGCCTGCCGGACC
CCCGACCGTTATCACTCCGCCCAATGGTATCACCACGCCCACGCCAACTG
ATGTCTCAACTCCATTGCCCACGGAAGATTCGGGATTCGGTCCGGCCCCC
GGTGGGAATGTAAGTCCGACTGCTGAGCTAGATCCATCCCCTTCCCCGGA
CGATGATTCCGTATGCGTCGATCAGAAGTACCTGCTCGACCGTGGGTTTT
CAGCAGAGCATCTCGTGCATAATGGAGGAATTTCATCAACTGTGTTGTGT
CCACAACACTCGCAATTACCGTGCGCTTCTCTTAACCACAAGGTGCGCTT
CAATGGAGTAGACATGAGCTACCGTCAGCTTTGTGAACATGAAGTGATGG
CATGTCAGCGCGACGAGATGCTGGTCAATTCTGTGTTCTCGCATCTCTGG
GATGAGGCGCGACATGGCGAAGTGATGCTTACAATGTTTGACACGCGTTA
TGCGGAGGTTGCCCAAAAAGGCTTGCACTCTGTCATGCACGCGCTTCGTA
CCGTTCGGAAGCGCGTTGTGTAG
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