Gchil7028.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil7028.t1
Unique Name	Gchil7028.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	608

Homology

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BLAST of Gchil7028.t1 vs. uniprot
Match: A0A2V3J727_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J727_9FLOR)

HSP 1 Score: 950 bits (2456), Expect = 0.000e+0
Identity = 458/588 (77.89%), Postives = 526/588 (89.46%), Query Frame = 0

Query:   21 SGTSYKSAFRYQSATDVNDLSKSLFSPHEDPLADEDRWSALSDIQREAWTASNVFIRFSEGIRDVLRATAHLRESSILLYINVQIIAPEYFITPEEERRISHYATAMSAGSNGTSLMFNVSMAPKHLFRRVAMHSPSDDPNRFMALLQQTAATIGSAHVMYVIINHGDDPINHYEARTPFLGTGRTSWVLYTVEKKKSLNVADLLSSIEHIAERVYAPKPLYFPVPFIRELTVQVSAYTPGFEHRARWLDNFDWNGFEDFVRKVADHGQHLRFSSSQVNSDCPACGKAFRDAEKPSREFVKRAALTLNENASLNHTWANGVPASPTRQRIPPNTFRMYVLDLHKTRQSESVQRLENKPLSFFPGMGILTLRSTEKDSVVALDTLFVQAFAAAVHGISEPNLYHTLQRGQRSSKQGKPSKVMADIANRYLVRSIVETRVNELEEIIEGILYFDIDPAKSLGDLQYTYFSQRVNLMLLKLQHAQQSLSDAHDAETAVYLAASTIHDIRAIRAAFDLDEEKDSFERFRDPTIRCHFSRLKREALRASYFLESD-SMLLHMLCCVLVFLGSAGISNFILWKYTAWKRRGKRE 607
            +GTSYKS FRYQS+TDVNDLS+SLFSPHEDPLA+EDRWSALSD QREAWTASN  IRFSEG+RDVLRAT+ LR+S +L+++NVQIIAPE+FI+ E+E RI HYA+AM+AGSNGT +MFNVS+APKHLF+RVAMHSPSDDP  FM LLQQTAAT+GS HVMYVI+NHGDDPINHYEARTPFLGTGRT WVLYT+E+KKSLNVADLL+S+E IA+RVYAPKPLYFPVPFI+ELTVQVSAYTPG EHRA WLD+FDW+GFED ++ VA   +HLRFSSSQVNS+CP C KAFR+++KPSR+FV+RAALTLNE    N+TWANGV ++  R+R+PPNTFR+YVLDLHKTRQSE VQRLENKPLSFFPGMGI+  RST++D+V AL+TLFVQAFAAAV+GISEPNLYHTL+RG++SSKQG+PS VM D+ +RYLVRSIVETR+ ELEEI+EGI+YFDIDPAKSLGDLQY YF+QRVNLML KLQHAQ  LSD+HDA TA+YLAAST HDIRAIR AFDL EEK +FERFRDPT+RCHFSRLKREALRASYFLES  S    M+ C L FLG   +SNF+L K+TAWKRRGKRE
Sbjct:    4 AGTSYKSTFRYQSSTDVNDLSRSLFSPHEDPLAEEDRWSALSDTQREAWTASNEVIRFSEGMRDVLRATSTLRQSPMLMHVNVQIIAPEHFISVEDENRIIHYASAMTAGSNGTKIMFNVSLAPKHLFKRVAMHSPSDDPTHFMGLLQQTAATLGSTHVMYVIVNHGDDPINHYEARTPFLGTGRTCWVLYTIERKKSLNVADLLTSVERIAQRVYAPKPLYFPVPFIKELTVQVSAYTPGVEHRAHWLDHFDWDGFEDAIKNVAVPSEHLRFSSSQVNSECPMCAKAFRESDKPSRDFVQRAALTLNEMVPFNNTWANGVFSTALRRRVPPNTFRLYVLDLHKTRQSEPVQRLENKPLSFFPGMGIVIFRSTDEDAVAALNTLFVQAFAAAVYGISEPNLYHTLKRGKKSSKQGRPSTVMTDVVSRYLVRSIVETRIAELEEIMEGIIYFDIDPAKSLGDLQYAYFAQRVNLMLFKLQHAQMLLSDSHDAATAIYLAASTSHDIRAIRLAFDLSEEKATFERFRDPTLRCHFSRLKREALRASYFLESTYSRFREMIMCTLTFLGFTALSNFLLRKHTAWKRRGKRE 591

The following BLAST results are available for this feature:

BLAST of Gchil7028.t1 vs. uniprot

BLAST of Gchil7028.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3J727_9FLOR	0.000e+0	77.89	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..5
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..21
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 572..595
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 6..16
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 596..607
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 22..571
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 17..21
None	No IPR available	TMHMM	TMhelix		coord: 573..595

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000131_pilon	contig	tig00000131_pilon:218895..220718 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil7028.t1	Gchil7028.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00000131_pilon 218895..220718 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil7028.t1 ID=Gchil7028.t1|Name=Gchil7028.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=608bp
MYLSKLLQFLVFLRLAATAFSGTSYKSAFRYQSATDVNDLSKSLFSPHED
PLADEDRWSALSDIQREAWTASNVFIRFSEGIRDVLRATAHLRESSILLY
INVQIIAPEYFITPEEERRISHYATAMSAGSNGTSLMFNVSMAPKHLFRR
VAMHSPSDDPNRFMALLQQTAATIGSAHVMYVIINHGDDPINHYEARTPF
LGTGRTSWVLYTVEKKKSLNVADLLSSIEHIAERVYAPKPLYFPVPFIRE
LTVQVSAYTPGFEHRARWLDNFDWNGFEDFVRKVADHGQHLRFSSSQVNS
DCPACGKAFRDAEKPSREFVKRAALTLNENASLNHTWANGVPASPTRQRI
PPNTFRMYVLDLHKTRQSESVQRLENKPLSFFPGMGILTLRSTEKDSVVA
LDTLFVQAFAAAVHGISEPNLYHTLQRGQRSSKQGKPSKVMADIANRYLV
RSIVETRVNELEEIIEGILYFDIDPAKSLGDLQYTYFSQRVNLMLLKLQH
AQQSLSDAHDAETAVYLAASTIHDIRAIRAAFDLDEEKDSFERFRDPTIR
CHFSRLKREALRASYFLESDSMLLHMLCCVLVFLGSAGISNFILWKYTAW
KRRGKRE*