Gchil7040.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7040.t1
Unique NameGchil7040.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length195
Homology
BLAST of Gchil7040.t1 vs. uniprot
Match: A0A2V3J6N0_9FLOR (40S ribosomal protein S19-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6N0_9FLOR)

HSP 1 Score: 284 bits (727), Expect = 3.680e-96
Identity = 142/145 (97.93%), Postives = 143/145 (98.62%), Query Frame = 0
Query:   50 MAANGCTVKDVPAAEFITTYAAYLKRVGLVELPPWVDTVKTAPSKELAPYDQDWLYIRIASIARKIYIRGGIGTGEFRKIYGCRQRRGMKPSRSSKASGGLIRNALQQLERLGVIEKDPRGGRRLTTKGQAEMDTQAGQCLSLNA 194
            MAANGCTVKDVPAAEFITTYAAYLKRVGLVELPPWVDTVKTAPSKELAPYDQDWLYIRIASIARKIYIRGGIGTGEFRKIYG RQRRGMKPSRSSKA+GGLIRNALQQLERLGVIEKDPRGGRRLTTKGQAEMDTQA QCLSLNA
Sbjct:    1 MAANGCTVKDVPAAEFITTYAAYLKRVGLVELPPWVDTVKTAPSKELAPYDQDWLYIRIASIARKIYIRGGIGTGEFRKIYGTRQRRGMKPSRSSKAAGGLIRNALQQLERLGVIEKDPRGGRRLTTKGQAEMDTQAAQCLSLNA 145          
BLAST of Gchil7040.t1 vs. uniprot
Match: R7QEX3_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QEX3_CHOCR)

HSP 1 Score: 251 bits (641), Expect = 4.970e-83
Identity = 123/142 (86.62%), Postives = 133/142 (93.66%), Query Frame = 0
Query:   53 NGCTVKDVPAAEFITTYAAYLKRVGLVELPPWVDTVKTAPSKELAPYDQDWLYIRIASIARKIYIRGGIGTGEFRKIYGCRQRRGMKPSRSSKASGGLIRNALQQLERLGVIEKDPRGGRRLTTKGQAEMDTQAGQCLSLNA 194
            +GCTVKDVP AEF+TTYAA+LKRVG VELP WVDT+KTAP KELAPYDQDW Y+RIASIARKIYIRGGIGTGEFRKIYG R+RRGMKP+RSSKASGGLIRNALQQLERLGVIE D RGGRRLT+KGQAEMDTQA QCLS++A
Sbjct:    6 SGCTVKDVPPAEFVTTYAAHLKRVGQVELPSWVDTIKTAPRKELAPYDQDWFYVRIASIARKIYIRGGIGTGEFRKIYGGRKRRGMKPNRSSKASGGLIRNALQQLERLGVIETDARGGRRLTSKGQAEMDTQAAQCLSVSA 147          
BLAST of Gchil7040.t1 vs. uniprot
Match: Q7XYZ1_GRIJA (Putative 40S ribosomal protein S19 (Fragment) n=1 Tax=Griffithsia japonica TaxID=83288 RepID=Q7XYZ1_GRIJA)

HSP 1 Score: 241 bits (615), Expect = 5.000e-79
Identity = 114/142 (80.28%), Postives = 132/142 (92.96%), Query Frame = 0
Query:   53 NGCTVKDVPAAEFITTYAAYLKRVGLVELPPWVDTVKTAPSKELAPYDQDWLYIRIASIARKIYIRGGIGTGEFRKIYGCRQRRGMKPSRSSKASGGLIRNALQQLERLGVIEKDPRGGRRLTTKGQAEMDTQAGQCLSLNA 194
            +GCTVKDVPAAEF+ TYA++LKRVG++E+PPWVDT+KTA S+ELAPYD DWLYIRIASIARK+YIRGGIGTGEFRKIYG R+RRGMKP RSSK+SGGLIR +LQQLE+LGV EKD RGGRR+T+KGQ+EMDTQA QC+S NA
Sbjct:    9 SGCTVKDVPAAEFVNTYASHLKRVGMIEIPPWVDTIKTAASRELAPYDPDWLYIRIASIARKLYIRGGIGTGEFRKIYGDRKRRGMKPCRSSKSSGGLIRYSLQQLEKLGVAEKDERGGRRITSKGQSEMDTQASQCMSSNA 150          
BLAST of Gchil7040.t1 vs. uniprot
Match: A0A1X6NSA7_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NSA7_PORUM)

HSP 1 Score: 195 bits (495), Expect = 8.940e-61
Identity = 93/138 (67.39%), Postives = 109/138 (78.99%), Query Frame = 0
Query:   53 NGCTVKDVPAAEFITTYAAYLKRVGLVELPPWVDTVKTAPSKELAPYDQDWLYIRIASIARKIYIRGGIGTGEFRKIYGCRQRRGMKPSRSSKASGGLIRNALQQLERLGVIEKDPRGGRRLTTKGQAEMDTQAGQCL 190
             G TVKDV AAEF+T YAA+LKRVG +ELP WVD VKTA  KELAPYD DW YIR+AS+ARK+Y+R G G G F K+YG R  RG +PS  SK+S G+IR+ALQQLE LG++EKDP GGRR+T KG +EMDTQA  CL
Sbjct:   10 TGYTVKDVAAAEFVTAYAAHLKRVGSLELPKWVDVVKTATLKELAPYDPDWYYIRVASLARKVYLRSGTGVGAFTKVYGGRMHRGTRPSHFSKSSKGIIRSALQQLETLGIVEKDPTGGRRITRKGMSEMDTQAATCL 147          
BLAST of Gchil7040.t1 vs. uniprot
Match: A0A5J4YVN2_PORPP (40S ribosomal protein S19-1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YVN2_PORPP)

HSP 1 Score: 193 bits (490), Expect = 4.520e-60
Identity = 92/140 (65.71%), Postives = 110/140 (78.57%), Query Frame = 0
Query:   54 GCTVKDVPAAEFITTYAAYLKRVGLVELPPWVDTVKTAPSKELAPYDQDWLYIRIASIARKIYIRGGIGTGEFRKIYGCRQRRGMKPSRSSKASGGLIRNALQQLERLGVIEKDPRGGRRLTTKGQAEMDTQAGQCLSLN 193
            GCTVKDV AAEFI  YAA+LK+VG +E+P +VD VKT+P KELAPYDQDW Y+R+AS+AR++Y RGG G G F K+YG  +  G +PS   KAS  +IR+ALQQLE++GVIEKDP GGRRLT KGQAEMDTQA   L  N
Sbjct:    7 GCTVKDVAAAEFIAVYAAHLKKVGAIEVPKYVDYVKTSPRKELAPYDQDWYYVRVASLARRVYCRGGTGVGSFAKVYGGTKNNGTRPSHFKKASRSIIRHALQQLEKVGVIEKDPHGGRRLTRKGQAEMDTQAATLLETN 146          
BLAST of Gchil7040.t1 vs. uniprot
Match: M2Y476_GALSU (40S ribosomal protein S19e n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y476_GALSU)

HSP 1 Score: 177 bits (448), Expect = 1.150e-53
Identity = 86/139 (61.87%), Postives = 108/139 (77.70%), Query Frame = 0
Query:   53 NGCTVKDVPAAEFITTYAAYLKRVGLVELPPWVDTVKTAPSKELAPYDQDWLYIRIASIARKIYIRGGIGTGEFRKIYGCRQRRGMKPSRSSKASGGLIRNALQQLERLGVIEKDPRGGRRLTTKGQAEMDTQAGQCLS 191
             G TVKDVPAA+FI +YA +LKR G VELPPWVD VKT+   ELAPYD DW Y+R+A++AR+IY R G G G FR++YG R+RRG KPS  + ASG +IR+AL+QLE+L +IEK  +GGRRLT KG+ E+D QA + LS
Sbjct:    8 RGFTVKDVPAADFIASYATFLKRTGSVELPPWVDYVKTSTRNELAPYDPDWFYVRMAALARQIYTRPGRGVGAFRRVYGGRKRRGSKPSHFALASGSVIRHALRQLEKLEIIEKTEQGGRRLTRKGRQELDLQAQRVLS 146          
BLAST of Gchil7040.t1 vs. uniprot
Match: A0A7S1THF1_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1THF1_9RHOD)

HSP 1 Score: 176 bits (445), Expect = 3.180e-53
Identity = 83/146 (56.85%), Postives = 108/146 (73.97%), Query Frame = 0
Query:   49 NMAANGCTVKDVPAAEFITTYAAYLKRVGLVELPPWVDTVKTAPSKELAPYDQDWLYIRIASIARKIYIRGGIGTGEFRKIYGCRQRRGMKPSRSSKASGGLIRNALQQLERLGVIEKDPRGGRRLTTKGQAEMDTQAGQCLSLNA 194
            ++   GCTV++V A +FI  YAA+LKRVG VELP W D VKT   KELAPYD DW ++R+A+IAR+IY++ GIG G  +K+YG    RG  PSR   ASG +IR ALQ+LE++G+IEKD  GGRRLT+KGQ EMDTQ  + +S ++
Sbjct:    2 DVGKGGCTVRNVAAQDFIEAYAAHLKRVGAVELPKWADYVKTGTFKELAPYDPDWFFVRMAAIARRIYLQNGIGVGALKKMYGGSVNRGFAPSRFQTASGKIIRTALQELEKMGIIEKDESGGRRLTSKGQGEMDTQVAKIMSASS 147          
BLAST of Gchil7040.t1 vs. uniprot
Match: D8S7K0_SELML (Uncharacterized protein n=1 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8S7K0_SELML)

HSP 1 Score: 174 bits (442), Expect = 8.790e-53
Identity = 81/139 (58.27%), Postives = 108/139 (77.70%), Query Frame = 0
Query:   50 MAANGCTVKDVPAAEFITTYAAYLKRVGLVELPPWVDTVKTAPSKELAPYDQDWLYIRIASIARKIYIRGGIGTGEFRKIYGCRQRRGMKPSRSSKASGGLIRNALQQLERLGVIEKDPRGGRRLTTKGQAEMDTQAGQ 188
            MAA   TVKDV + EF+  YAA+LKR G VELPPW D VKT+ +KELAPYD DW Y+R AS+ARKIY+RGGIG G F+KIYG  +R G +PS   K+SG + R+ L+QLE++ +IEK+P+GGRR+T++G+ ++D  AG+
Sbjct:    1 MAATSKTVKDVSSHEFVRAYAAHLKRSGKVELPPWTDIVKTSVAKELAPYDPDWFYVRAASMARKIYLRGGIGVGAFKKIYGGSKRNGARPSHFCKSSGAIARHVLKQLEKIDIIEKEPKGGRRITSQGRRDLDQVAGR 139          
BLAST of Gchil7040.t1 vs. uniprot
Match: A9NKW9_PICSI (Uncharacterized protein n=1 Tax=Picea sitchensis TaxID=3332 RepID=A9NKW9_PICSI)

HSP 1 Score: 172 bits (436), Expect = 6.710e-52
Identity = 81/137 (59.12%), Postives = 100/137 (72.99%), Query Frame = 0
Query:   52 ANGCTVKDVPAAEFITTYAAYLKRVGLVELPPWVDTVKTAPSKELAPYDQDWLYIRIASIARKIYIRGGIGTGEFRKIYGCRQRRGMKPSRSSKASGGLIRNALQQLERLGVIEKDPRGGRRLTTKGQAEMDTQAGQ 188
            A  CTVKDV   EF+T YAA+LKR G +ELP W D VKTA  KELAPYD DW Y+R AS+ARKIY+R GIG G F KIYG RQR G +P    K+SG + R+ LQQLE++ ++E DP GGRR+T+ GQ ++D  AG+
Sbjct:    2 ATACTVKDVSPHEFVTAYAAHLKRSGKIELPHWTDLVKTATFKELAPYDPDWYYVRAASMARKIYLRKGIGVGAFSKIYGGRQRNGARPPHFCKSSGSIARHVLQQLEKMNIVEMDPNGGRRITSSGQRDLDQVAGR 138          
BLAST of Gchil7040.t1 vs. uniprot
Match: S8DAM5_9LAMI (Uncharacterized protein n=2 Tax=Genlisea aurea TaxID=192259 RepID=S8DAM5_9LAMI)

HSP 1 Score: 172 bits (436), Expect = 6.930e-52
Identity = 81/145 (55.86%), Postives = 108/145 (74.48%), Query Frame = 0
Query:   50 MAANGCTVKDVPAAEFITTYAAYLKRVGLVELPPWVDTVKTAPSKELAPYDQDWLYIRIASIARKIYIRGGIGTGEFRKIYGCRQRRGMKPSRSSKASGGLIRNALQQLERLGVIEKDPRGGRRLTTKGQAEMDTQAGQCLSLNA 194
            MAANG T+KDV   +F+ +YAA+LKR G +ELP WVD VKT   KELAPYD DW YIR AS+ARKIY+RGG+G G FR+IYG R+  G +PS   K+SG + R+ LQQL+ + ++E DP GGRR+T+ GQ ++D  AG+ +++ A
Sbjct:    1 MAANGRTLKDVSPHDFVKSYAAHLKRSGKIELPEWVDIVKTGVLKELAPYDPDWYYIRAASMARKIYLRGGLGVGSFRRIYGGRKNNGSRPSHFGKSSGAIARHILQQLQSISIVEVDPSGGRRITSSGQRDLDQVAGRIVNVVA 145          
The following BLAST results are available for this feature:
BLAST of Gchil7040.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J6N0_9FLOR3.680e-9697.9340S ribosomal protein S19-1 n=1 Tax=Gracilariopsis... [more]
R7QEX3_CHOCR4.970e-8386.62Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
Q7XYZ1_GRIJA5.000e-7980.28Putative 40S ribosomal protein S19 (Fragment) n=1 ... [more]
A0A1X6NSA7_PORUM8.940e-6167.39Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A5J4YVN2_PORPP4.520e-6065.7140S ribosomal protein S19-1 n=1 Tax=Porphyridium p... [more]
M2Y476_GALSU1.150e-5361.8740S ribosomal protein S19e n=1 Tax=Galdieria sulph... [more]
A0A7S1THF1_9RHOD3.180e-5356.85Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
D8S7K0_SELML8.790e-5358.27Uncharacterized protein n=1 Tax=Selaginella moelle... [more]
A9NKW9_PICSI6.710e-5259.12Uncharacterized protein n=1 Tax=Picea sitchensis T... [more]
S8DAM5_9LAMI6.930e-5255.86Uncharacterized protein n=2 Tax=Genlisea aurea Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001266Ribosomal protein S19eSMARTSM01413Ribosomal_S19e_2coord: 56..192
e-value: 1.7E-76
score: 270.1
IPR001266Ribosomal protein S19ePFAMPF01090Ribosomal_S19ecoord: 56..189
e-value: 1.6E-51
score: 173.6
IPR001266Ribosomal protein S19ePANTHERPTHR1171040S RIBOSOMAL PROTEIN S19coord: 55..189
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 43..193
e-value: 3.2E-62
score: 211.0
NoneNo IPR availablePANTHERPTHR11710:SF22RIBOSOMAL PROTEIN S19E, WINGED HELIX-TURN-HELIX DNA-BINDING DOMAIN PROTEIN-RELATEDcoord: 55..189
IPR018277Ribosomal protein S19e, conserved sitePROSITEPS00628RIBOSOMAL_S19Ecoord: 140..159
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 56..190

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000131_piloncontigtig00000131_pilon:246756..247421 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7040.t1Gchil7040.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000131_pilon 246756..247421 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7040.t1 ID=Gchil7040.t1|Name=Gchil7040.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=195bp
MRLSGSQTGRPSSTAFQDAELIVVRGATLAQLLLFSGPCLLPPRTTFSNM
AANGCTVKDVPAAEFITTYAAYLKRVGLVELPPWVDTVKTAPSKELAPYD
QDWLYIRIASIARKIYIRGGIGTGEFRKIYGCRQRRGMKPSRSSKASGGL
IRNALQQLERLGVIEKDPRGGRRLTTKGQAEMDTQAGQCLSLNA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001266Ribosomal_S19e
IPR036388WH-like_DNA-bd_sf
IPR018277Ribosomal_S19e_CS
IPR036390WH_DNA-bd_sf