Gchil7048.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7048.t1
Unique NameGchil7048.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length1165
Homology
BLAST of Gchil7048.t1 vs. uniprot
Match: A0A812TWK0_9DINO (Hypothetical protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812TWK0_9DINO)

HSP 1 Score: 97.8 bits (242), Expect = 6.410e-17
Identity = 147/543 (27.07%), Postives = 231/543 (42.54%), Query Frame = 0
Query:  383 IVSSGVTIDQSAKAMIQGCLFTRCVMAD---VYIKGGCD----VSIQYCRFDHGNAGDAG--------VRVDVNYEGKVNIEHSVFVGKPARAIVDSVSSAPPELRARMGAMGARNIPI----NKFMVKTVSLARNASGIERLREDMKRADIRSEVQPGVPN--HADTDRISSSNNETP--GGAGALYRLLGKQHFWTDYPIGNTYGTDVLRYADSKNLKKNEVIVVLAACGDIRNVVETICGLEKKQLKKVCFSLNDISISILARNITLLELACRLWPKEENVRANSRKRAARIWLHVWGSIALTLGDHTALLKVLADL-IKGKLPNWLSPLDAHVRAALTCCWSEWASCKRTLREVREERDTFSVSAAWYKNNVG---NVTEMLA--ALAAGLKDSESSALLNKAELLNG---------GGEK----VNPTLL-APGLHYKMYES-SIFRSIDMRAFIQGDVTRLHSAACDVMNEKGPIVARALRSGALRIEVQPGDLTFVLRS---QREVDVVELSNALDYISKPACLISAARCLARPGG 878
            + S GV++   A   +  C   +C+  D    ++K G +     S+ Y          AG        V +  NY G+V +  + F+G  + A  +++      L   M ++G  + P     N+   K  +       +E L   + +A      +P V +    D  R+    ++ P    A A +     Q+    Y IGNT+G  V R    +    + V V+LAACGDIRN++ T+       L    F+LND + S+LARN+TLL+L  +    +E+V A            VW +  LT      LL  L  L  K   P W+S  DA ++   T    EW     T +EV      FS      K   G   + +E L+  A AAG K S  +     + +  G         G E     VNPTLL APGL Y +Y S SIFR++ +     G  T       D +  +     +A+    + +  + GD+  V++S   +++ D ++ SN  DY+S  A L +++R L +P G
Sbjct:   99 MASFGVSVGMGANVSVHQC---KCINNDPVSFFVKDGSNFTLSASLVYYTRQRSRCTWAGGWTHPTNAVNIGTNYGGEVRLLQNAFIGPGSMA--EAMHEDFRILPQHMKSLGMWSSPAYQEGNEHFTKDSA---EVPSLEALAARLPKA-----CRPTVVDVKRRDETRMPLLAHQRPCYTVADAHWSPTSSQY----YAIGNTFGFSVARDIPKE---VSNVSVLLAACGDIRNLLATVSACPATSLH---FTLNDGNKSMLARNLTLLQLIAQ-GAADEDVLA------------VWANHCLTTHQRDVLLDALKALESKSSHPPWISH-DASLQGVFT----EWM----TAQEV------FSADELLRKRQPGLDISTSEELSCTAAAAGGKLSARARREIASYIKTGSLPDLAACQGSEDARACVNPTLLLAPGLQYTVYFSTSIFRAVPLA----GTATSAVEGLLDTLKPQFESFRQAVEEHRVFVRTEAGDVLGVMQSYASKQQFDFIDTSNVADYVSMAAILHASSRVL-KPQG 585          
BLAST of Gchil7048.t1 vs. uniprot
Match: D8UL84_VOLCA (Uncharacterized protein n=2 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8UL84_VOLCA)

HSP 1 Score: 96.3 bits (238), Expect = 2.660e-16
Identity = 148/566 (26.15%), Postives = 216/566 (38.16%), Query Frame = 0
Query:    7 LFGQGKYGAAEKAF---------LTAAKNAQSSV--DQSLQLSNASQCVLKISQYERAAQHALEAIILNPRNAKAHYRLASAYAAMPLPQQAIDAARR------------RCDIAMANARAFALIKAAGGN-----------------------------NLPNVVGLELVSCDENPISTCAAELLRYISDSKVVLVTRTQDILDCAGVVAVLETNCQMPLGEFSLPAHIVGLDGSALIDASNAPHALFLQRG----NLAVWSLRFKGALGAMIVTT--SYLTLVDCSINDHIEDCILVTDPTSTALIAFCTFSNCTV-GVEVREGASATIVRSKIQNMSKSGVSAYGGARSIVLEETLVENAGIEGVQCLGPRA-PATFDEYNLEESFRKLRENSLACATADIAMDSARGNVDSAQLVVILRNCCVRGCGKNRSQIVSSGVTIDQSAKAMIQGCLFTRCVMADVYIKGGCDVSIQYCRFDHGNAGD------------------------------------AGVRVDVNYEGKVNIEHSVFVGKPARAIVDS-VSSAPPELRAR 475
            LF +G + AA  A+         L  A N   +V  ++++ L N + C L++     A     + + L P N KAHYRLA +     LP    DAA              R D  MA    +  I+ A  N                              LP   G    +   + +         ++     +  T T+      GV     +   + +G   L +   G   +  +DA    H++F +       LA   L   G + A  V+   + L L++C I D+ E  +LVT    TA +A C F+      +EVREG      R  I N ++ GVSAYGGAR++VL +  +  +  E V   G     AT  ++ L    RK R  S A ATA+ A +  R N  S  L V L +C + G G+        GV+ D+    + +GCL         +IKGG D SI  CR  +  A                                       G+ + VNY G V I  + FVG    AIV+  V SA   ++AR
Sbjct:   17 LFVKGNFIAAAAAYSEGLQSNSSLKTASNLNCTVAEERAILLCNRAACHLELGNAAAAEADCRDCLQLQPCNVKAHYRLARS-----LPADHPDAAAAIAIAIALCEPGGRADAMMAT---YNTIQRAADNAXXXXXXXXXXXXXXXXXXXXXXXXXVRLQLPPDCGRVAAASSWSEVEAALRRGFSFVVLRPGIYTTNTRAPQAAPGV----SSYTLLAVGSVVLQSTRDGGSHAIWVDAELPFHSIFRRTPPASVTLAGVRLVGSGRVTAACVSGDGAKLQLLNCRIEDYGEAGLLVTGA-CTARLAGCVFTRTAAQAIEVREGGKLIADRVTITNCNQ-GVSAYGGARTVVLRDCTIVGSKRENVLLSGTYVNAATEAQHGLGGDGRKARSASAAVATAE-AEEWGRRN--STPLDVALLDCTISGSGQ-------FGVSADRGTSVLARGCLLEDNDPYAFFIKGGTDASILACRIHYSGARSKCDWGISAGGIGXXXXXXXRGGVRGRGAAAAAPMRQTGIYIGVNYGGTVTIVGNAFVGPEEMAIVEEGVGSAEVAIKAR 558          
BLAST of Gchil7048.t1 vs. uniprot
Match: D8UL85_VOLCA (Uncharacterized protein (Fragment) n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8UL85_VOLCA)

HSP 1 Score: 89.0 bits (219), Expect = 3.950e-14
Identity = 146/566 (25.80%), Postives = 211/566 (37.28%), Query Frame = 0
Query:    7 LFGQGKYGAAEKAF---------LTAAKNAQSSV--DQSLQLSNASQCVLKISQYERAAQHALEAIILNPRNAKAHYRLASAYAAMPLPQQAIDAARR------------RCDIAMANARAFALIKAAGGN-----------------------------NLPNVVGLELVSCDENPISTCAAELLRYISDSKVVLVTRTQDILDCAGVVAVLETNCQMPLGEFSLPAHIVGLDGSALIDASNAPHALFLQRG----NLAVWSLRFKGALGAMIVTT--SYLTLVDCSINDHIEDCILVTDPTSTALIAFCTFSNCTV-GVEVREGASATIVRSKIQNMSKSGVSAYGGARSIVLEETLVENAGIEGVQCLGPRA-PATFDEYNLEESFRKLRENSLACATADIAMDSARGNVDSAQLVVILRNCCVRGCGKNRSQIVSSGVTIDQSAKAMIQGCLFTRCVMADVYIKGGCDVSIQYCRFDHGNAGD------------------------------------AGVRVDVNYEGKVNIEHSVFVGKPARAIVDS-VSSAPPELRAR 475
            LF +G + AA  A+         L  A N   +V  ++++ L N + C L++     A       + L P N KAHYRLA +     LP    DAA              R D  MA    +  I+ A  N                              LP   G    +   + +         ++     +  T T+      GV     T   + +G   L +   G   +  ++A    H++F +       LA   L   G + A  V+   + L L++C I D+ E  +LVT    TA +A C F+      +EVREG      R  I N ++ GVSAYGGAR++VL +  +  +  E V   G     AT  ++ L    RK R  S A ATA  A +  R N  S  L V L +C +   G+        GV+ D+    + +GCL         +IKGG D SI  CR  +  A                                       G+ + VNY G V I  + FVG    AIV+  V SA   +  R
Sbjct:   49 LFVKGNFIAAAAAYSEGLQSNSSLKTASNLNCTVAEERAILLCNRAACHLELGNAAAAEADCRACLQLQPCNIKAHYRLARS-----LPADHPDAAAAIAIAIALCEPGGRADAMMAT---YNTIQRAADNAXXXXXXXXXXXXXXXXXXXXXXXXXVRLQLPPDCGRVAAASSWSEVEAALRRGFSFVVLRPGIYTTNTRAPQAAPGV----STYTLLAVGSVVLQSTRDGGSHAIWVNAELPFHSIFRRTPPASVTLAGVRLVGSGRVAAACVSGDGAKLQLLNCRIEDYGEAGLLVTGA-CTARLAGCVFTRTAAQAIEVREGGKLIADRVTITNCNQ-GVSAYGGARTVVLRDCTIVGSKRENVLLSGTYVNAATEAQHGLGGDGRKARSASAAVATAK-AEEWGRRN--STPLDVALLDCTISRSGQ-------FGVSADRGTSVLARGCLLEDNDPYAFFIKGGTDASILACRIHYSGARSKCDWGISAGGIGXXXXXXXRGGVRGRGAAAAAPMRQTGIHIGVNYGGTVTIVGNAFVGPEKMAIVEEGVGSAEVAITTR 590          
BLAST of Gchil7048.t1 vs. uniprot
Match: A0A8J4FXE0_9CHLO (Uncharacterized protein (Fragment) n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4FXE0_9CHLO)

HSP 1 Score: 75.5 bits (184), Expect = 2.950e-10
Identity = 64/196 (32.65%), Postives = 93/196 (47.45%), Query Frame = 0
Query:  230 LTLVDCSINDHIEDCILVTDPTSTALIAFCTFSN-CTVGVEVREGASATIVRSKIQNMSKSGVSAYGGARSIVLEETLVENAGIEGVQCLGPRAPATFDEYNLEESFRKLRENSLACATADIAMDSARGNVDSAQLVVILRNCCVRGCGKNRSQIVSSGVTIDQSAKAMIQGCLFTRCVMADVYIKGGCDVSIQYC 424
            L L+DC + D+ ED  L+     TA +A CTF+   +  +EVREG   T  R  I + S+ GV+AYGGARS+VL +  + N+  E +   G    A      L E       + +AC+ A+ A+ S  G      L V+L +C +   G         GV+ D+ A  + +GC          +IKGG D  I  C
Sbjct:  276 LNLLDCHVADY-EDAGLLVAGKCTAQLARCTFTRTASQAIEVREGGELTADRVTIISCSQ-GVTAYGGARSVVLRDCTILNSKKENMMVCGTYENAATRA--LGEDVYNRGTDPIACSVAEAAVQS--GYRLGTPLDVLLLDCTISHAG-------CFGVSADRGANVVARGCYLEHNDPFAFFIKGGTDAIILAC 458          
BLAST of Gchil7048.t1 vs. uniprot
Match: A0A835WHE2_9CHLO (DUF4470 domain-containing protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835WHE2_9CHLO)

HSP 1 Score: 68.6 bits (166), Expect = 8.590e-8
Identity = 70/251 (27.89%), Postives = 104/251 (41.43%), Query Frame = 0
Query:  230 LTLVDCSINDHIEDCILVTDPTSTALIAFCTFSN-CTVGVEVREGASATIVRSKIQNMSKSGVSAYGGARSIVLEETLVENAGIEGVQCLGPRAPATFDEYNL-----EESFRKLRENSLACATADIAMDSARGNVDSAQLVVILRNCCVRGCGKNRSQIVSSGVTIDQSAKAMIQGCLFTRCVMADVYIKGGCDVSIQYCRFDHGNAGD-------------------AGVRVDVNYEGKVNIEHSVFVG 455
            L +  C + D+ E  +LV  P + A +  C F+   +  VEVREG S    R  + +  + GVSAYGGAR +VL ++ V     EGV   G  + A      L       ++   R + ++ A  + A +        +QL V L  C V GCG+        GV+ D   + +++ C         + IKG   V+   C+F +  A                      GVRV VNY   V +E   F G
Sbjct:  337 LIMSRCLVVDYDEVGVLVAGP-AAARLDRCVFARTASQAVEVREGGSLAGHRLSVADC-RQGVSAYGGARRVVLTDSRVLRCKYEGVLLAGGHSNAATAAQALMGTDKPPAWATDRGSKVSRAAHECATELG------SQLRVRLEGCVVAGCGQ-------FGVSADSGTQLLLRRCRLLGNDPVQLLIKGNSHVTALCCQFSYSGAASRCEWYTRMGLPAASALRRQCGVRVGVNYGAWVRLEGCAFAG 572          
BLAST of Gchil7048.t1 vs. uniprot
Match: A0A084B883_STACB (MYND-type zinc finger protein samB n=2 Tax=Stachybotrys chartarum TaxID=74722 RepID=A0A084B883_STACB)

HSP 1 Score: 63.5 bits (153), Expect = 1.800e-6
Identity = 47/158 (29.75%), Postives = 75/158 (47.47%), Query Frame = 0
Query:  534 SSNNETPGGAGALYRLLGKQHFWTDYPIGNTYGTDVLRYADSKNLKKNE-VIVVLAACGDIRNVVETICGLEKKQLKKVCFSLNDISISILARNITLLELACRLWPKEENVRANSRKRAARIWLHVWGS-------IALTLGDHTALLKVLADLIKGK 683
            S     P   G  Y+  G +     YP GN    DVL+ + ++ +  +E V ++ AA GD+RNV++TI  + +   K +  ++ND  I I+ARN+ +L +A         +  N    A    +HVW S       +A+  G    LL+ + D IK K
Sbjct:   65 SREGREPAFLGGGYQEFGNKK----YPWGNIPAFDVLQLSSNEGVAYDEDVSLLFAASGDLRNVIKTISQVPESYKKSISLTINDRDIDIVARNVIMLLIA---------LFVNDPNEAVLCIIHVWYSSLLRKSDLAMLQGLIRPLLQAVCDSIKDK 209          
The following BLAST results are available for this feature:
BLAST of Gchil7048.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A812TWK0_9DINO6.410e-1727.07Hypothetical protein n=1 Tax=Symbiodinium natans T... [more]
D8UL84_VOLCA2.660e-1626.15Uncharacterized protein n=2 Tax=Volvox carteri f. ... [more]
D8UL85_VOLCA3.950e-1425.80Uncharacterized protein (Fragment) n=1 Tax=Volvox ... [more]
A0A8J4FXE0_9CHLO2.950e-1032.65Uncharacterized protein (Fragment) n=1 Tax=Volvox ... [more]
A0A835WHE2_9CHLO8.590e-827.89DUF4470 domain-containing protein n=1 Tax=Chlamydo... [more]
A0A084B883_STACB1.800e-629.75MYND-type zinc finger protein samB n=2 Tax=Stachyb... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 3..109
e-value: 1.3E-12
score: 49.8
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 4..106
IPR039448Right handed beta helix domainPFAMPF13229Beta_helixcoord: 366..461
e-value: 5.5E-6
score: 26.3
NoneNo IPR availableGENE3D3.40.50.150Vaccinia Virus protein VP39coord: 808..972
e-value: 1.8E-5
score: 26.1
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 193..467
e-value: 2.6E-11
score: 45.2
IPR027974Domain of unknown function DUF4470PFAMPF14737DUF4470coord: 560..663
e-value: 4.2E-15
score: 55.6
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 184..315
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 366..455
IPR029063S-adenosyl-L-methionine-dependent methyltransferaseSUPERFAMILY53335S-adenosyl-L-methionine-dependent methyltransferasescoord: 820..920

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000131_piloncontigtig00000131_pilon:282907..286401 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7048.t1Gchil7048.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000131_pilon 282907..286401 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7048.t1 ID=Gchil7048.t1|Name=Gchil7048.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=1165bp
MTPAKDLFGQGKYGAAEKAFLTAAKNAQSSVDQSLQLSNASQCVLKISQY
ERAAQHALEAIILNPRNAKAHYRLASAYAAMPLPQQAIDAARRRCDIAMA
NARAFALIKAAGGNNLPNVVGLELVSCDENPISTCAAELLRYISDSKVVL
VTRTQDILDCAGVVAVLETNCQMPLGEFSLPAHIVGLDGSALIDASNAPH
ALFLQRGNLAVWSLRFKGALGAMIVTTSYLTLVDCSINDHIEDCILVTDP
TSTALIAFCTFSNCTVGVEVREGASATIVRSKIQNMSKSGVSAYGGARSI
VLEETLVENAGIEGVQCLGPRAPATFDEYNLEESFRKLRENSLACATADI
AMDSARGNVDSAQLVVILRNCCVRGCGKNRSQIVSSGVTIDQSAKAMIQG
CLFTRCVMADVYIKGGCDVSIQYCRFDHGNAGDAGVRVDVNYEGKVNIEH
SVFVGKPARAIVDSVSSAPPELRARMGAMGARNIPINKFMVKTVSLARNA
SGIERLREDMKRADIRSEVQPGVPNHADTDRISSSNNETPGGAGALYRLL
GKQHFWTDYPIGNTYGTDVLRYADSKNLKKNEVIVVLAACGDIRNVVETI
CGLEKKQLKKVCFSLNDISISILARNITLLELACRLWPKEENVRANSRKR
AARIWLHVWGSIALTLGDHTALLKVLADLIKGKLPNWLSPLDAHVRAALT
CCWSEWASCKRTLREVREERDTFSVSAAWYKNNVGNVTEMLAALAAGLKD
SESSALLNKAELLNGGGEKVNPTLLAPGLHYKMYESSIFRSIDMRAFIQG
DVTRLHSAACDVMNEKGPIVARALRSGALRIEVQPGDLTFVLRSQREVDV
VELSNALDYISKPACLISAARCLARPGGILLMHTMIARTLDQDMQILRKD
LDEHLLRGSSREDLVELFDLCTVVEESDATDSYGDGINTGARWVYQAKSY
ESFDTQERERLRMSMMKAAKRWCGGVKPVGLSCKIGYPIAAWPSAVAALH
VVTAAMRSTEFHARDVVKEMCNASRAISLFKLELYAHAMIMDGNEADLLV
ATLTLPGLHTHPVLGFHRHQILQLGFNLGQANEETVWLFDVFECSPSRGV
CEVIVRKKDIFLMRPFSARLCHVDLNDGVMKGATQSVNLIRSSTLKTREL
SDSETIAMRKAIVL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR039448Beta_helix
IPR012334Pectin_lyas_fold
IPR027974DUF4470
IPR011050Pectin_lyase_fold/virulence
IPR029063SAM-dependent_MTases