Gchil7087.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGchil7087.t1
Unique NameGchil7087.t1
TypemRNA
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length249
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000131_piloncontigtig00000131_pilon:553455..554201 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7087Gchil7087Gracilaria chilensis NLEC103_M9 malegenetig00000131_pilon 553455..554201 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7087.t1.start1Gchil7087.t1.start1Gracilaria chilensis NLEC103_M9 malestart_codontig00000131_pilon 553455..553457 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7087.t1.CDS1Gchil7087.t1.CDS1Gracilaria chilensis NLEC103_M9 maleCDStig00000131_pilon 553455..554201 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7087.t1.exon1Gchil7087.t1.exon1Gracilaria chilensis NLEC103_M9 maleexontig00000131_pilon 553455..554201 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7087.t1.stop1Gchil7087.t1.stop1Gracilaria chilensis NLEC103_M9 malestop_codontig00000131_pilon 554199..554201 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7087.t1Gchil7087.t1Gracilaria chilensis NLEC103_M9 malepolypeptidetig00000131_pilon 553455..554201 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gchil7087.t1 ID=Gchil7087.t1|Name=Gchil7087.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=249bp
MSAQKRLTLWREGGLQRVFAGAACGFVGGASYAYFTRLPPVRAGVACAML
ATPFFTVREVVAASMAVDGPVASAMTGGVAGYFGALVTLGPCWKSISRSA
MLMGVGCGFVDILLSGLDWKRKLYLVNRHDAAVAAAAENVNTPHQHPHQP
PQLHQPPQPAPSAPFKWPHWFPVVKQIDDEYEELLRRQRATVQALEQEQA
RIALLLEALESVKAGKQVTDLELADAGLRSPDKNPSQPPLSSPSIPAP*
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spliced messenger RNA

>Gchil7087.t1 ID=Gchil7087.t1|Name=Gchil7087.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=747bp|location=Sequence derived from alignment at tig00000131_pilon:553455..554201+ (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGTCCGCGCAAAAGCGCCTGACCCTCTGGCGCGAAGGAGGCCTGCAACG
CGTCTTCGCCGGCGCCGCTTGCGGATTCGTCGGCGGCGCTTCCTACGCCT
ACTTCACCCGTTTACCCCCCGTGCGAGCAGGCGTCGCCTGTGCCATGTTG
GCCACCCCGTTCTTCACCGTACGTGAGGTCGTTGCCGCCTCAATGGCCGT
CGACGGACCCGTCGCAAGTGCCATGACCGGTGGCGTCGCCGGATACTTTG
GAGCCCTAGTCACTTTGGGACCTTGCTGGAAGTCAATCAGTCGCTCGGCC
ATGCTCATGGGCGTCGGATGCGGCTTTGTTGACATTCTTCTAAGCGGTCT
TGATTGGAAGCGCAAGCTTTACTTGGTCAATCGCCATGACGCTGCTGTCG
CAGCCGCTGCCGAAAATGTCAACACCCCCCATCAACACCCTCACCAACCT
CCCCAGCTCCATCAACCGCCCCAGCCCGCTCCTTCCGCACCCTTCAAGTG
GCCCCATTGGTTCCCTGTCGTCAAGCAGATTGATGACGAGTACGAGGAAT
TGCTTCGCAGACAACGTGCCACCGTGCAAGCTCTGGAACAAGAACAAGCT
CGCATTGCCCTCTTGTTGGAGGCTTTGGAATCCGTTAAGGCCGGTAAGCA
GGTCACCGATCTCGAATTGGCCGATGCTGGACTGCGATCTCCCGACAAGA
ACCCGTCGCAGCCACCTCTGTCCTCCCCGTCCATACCTGCACCTTGA
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protein sequence of Gchil7087.t1

>Gchil7087.t1 ID=Gchil7087.t1|Name=Gchil7087.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=249bp
MSAQKRLTLWREGGLQRVFAGAACGFVGGASYAYFTRLPPVRAGVACAML
ATPFFTVREVVAASMAVDGPVASAMTGGVAGYFGALVTLGPCWKSISRSA
MLMGVGCGFVDILLSGLDWKRKLYLVNRHDAAVAAAAENVNTPHQHPHQP
PQLHQPPQPAPSAPFKWPHWFPVVKQIDDEYEELLRRQRATVQALEQEQA
RIALLLEALESVKAGKQVTDLELADAGLRSPDKNPSQPPLSSPSIPAP*
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mRNA from alignment at tig00000131_pilon:553455..554201+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gchil7087.t1 ID=Gchil7087.t1|Name=Gchil7087.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=747bp|location=Sequence derived from alignment at tig00000131_pilon:553455..554201+ (Gracilaria chilensis NLEC103_M9 male)
ATGTCCGCGCAAAAGCGCCTGACCCTCTGGCGCGAAGGAGGCCTGCAACG
CGTCTTCGCCGGCGCCGCTTGCGGATTCGTCGGCGGCGCTTCCTACGCCT
ACTTCACCCGTTTACCCCCCGTGCGAGCAGGCGTCGCCTGTGCCATGTTG
GCCACCCCGTTCTTCACCGTACGTGAGGTCGTTGCCGCCTCAATGGCCGT
CGACGGACCCGTCGCAAGTGCCATGACCGGTGGCGTCGCCGGATACTTTG
GAGCCCTAGTCACTTTGGGACCTTGCTGGAAGTCAATCAGTCGCTCGGCC
ATGCTCATGGGCGTCGGATGCGGCTTTGTTGACATTCTTCTAAGCGGTCT
TGATTGGAAGCGCAAGCTTTACTTGGTCAATCGCCATGACGCTGCTGTCG
CAGCCGCTGCCGAAAATGTCAACACCCCCCATCAACACCCTCACCAACCT
CCCCAGCTCCATCAACCGCCCCAGCCCGCTCCTTCCGCACCCTTCAAGTG
GCCCCATTGGTTCCCTGTCGTCAAGCAGATTGATGACGAGTACGAGGAAT
TGCTTCGCAGACAACGTGCCACCGTGCAAGCTCTGGAACAAGAACAAGCT
CGCATTGCCCTCTTGTTGGAGGCTTTGGAATCCGTTAAGGCCGGTAAGCA
GGTCACCGATCTCGAATTGGCCGATGCTGGACTGCGATCTCCCGACAAGA
ACCCGTCGCAGCCACCTCTGTCCTCCCCGTCCATACCTGCACCTTGA
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Coding sequence (CDS) from alignment at tig00000131_pilon:553455..554201+

>Gchil7087.t1 ID=Gchil7087.t1|Name=Gchil7087.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=747bp|location=Sequence derived from alignment at tig00000131_pilon:553455..554201+ (Gracilaria chilensis NLEC103_M9 male)
ATGTCCGCGCAAAAGCGCCTGACCCTCTGGCGCGAAGGAGGCCTGCAACG
CGTCTTCGCCGGCGCCGCTTGCGGATTCGTCGGCGGCGCTTCCTACGCCT
ACTTCACCCGTTTACCCCCCGTGCGAGCAGGCGTCGCCTGTGCCATGTTG
GCCACCCCGTTCTTCACCGTACGTGAGGTCGTTGCCGCCTCAATGGCCGT
CGACGGACCCGTCGCAAGTGCCATGACCGGTGGCGTCGCCGGATACTTTG
GAGCCCTAGTCACTTTGGGACCTTGCTGGAAGTCAATCAGTCGCTCGGCC
ATGCTCATGGGCGTCGGATGCGGCTTTGTTGACATTCTTCTAAGCGGTCT
TGATTGGAAGCGCAAGCTTTACTTGGTCAATCGCCATGACGCTGCTGTCG
CAGCCGCTGCCGAAAATGTCAACACCCCCCATCAACACCCTCACCAACCT
CCCCAGCTCCATCAACCGCCCCAGCCCGCTCCTTCCGCACCCTTCAAGTG
GCCCCATTGGTTCCCTGTCGTCAAGCAGATTGATGACGAGTACGAGGAAT
TGCTTCGCAGACAACGTGCCACCGTGCAAGCTCTGGAACAAGAACAAGCT
CGCATTGCCCTCTTGTTGGAGGCTTTGGAATCCGTTAAGGCCGGTAAGCA
GGTCACCGATCTCGAATTGGCCGATGCTGGACTGCGATCTCCCGACAAGA
ACCCGTCGCAGCCACCTCTGTCCTCCCCGTCCATACCTGCACCTTGA
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