Gchil3039.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil3039.t1
Unique NameGchil3039.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length300
Homology
BLAST of Gchil3039.t1 vs. uniprot
Match: A0A2H3K353_WOLCO (WD40 repeat-like protein n=1 Tax=Wolfiporia cocos (strain MD-104) TaxID=742152 RepID=A0A2H3K353_WOLCO)

HSP 1 Score: 87.4 bits (215), Expect = 1.140e-15
Identity = 49/144 (34.03%), Postives = 84/144 (58.33%), Query Frame = 0
Query:   48 SAVFAVSLADHG-RFCVTGSGDGIIQVWDVRTGRRVGDSLQACGGVRKIVDVPKSNKIVSFGWDNVVRVWQIGDKGLTSIASLVGHEGMVRAIAISPSGNCALSASNDKTIRVWDLSKADGTHTVLRGHEMYPAGVHFSPDGKL 190
            S+V AV+ + HG ++  TGSGD I++VWD+R  + +G  +   G +  + + P  + ++S   D  + ++   D  +  + +L GH+G V ++A+ PSG  ALS   D+T+R+WDL + +G+ +   G E     VH+S DG L
Sbjct:  127 SSVRAVAASPHGGKWLATGSGDEIVKVWDLRRRKEIGGLMHHEGSITHL-EFPSRSHLLSASEDGSLCLFHARDWSV--LRTLKGHKGRVNSVAVHPSGKVALSVGKDRTLRMWDLMRGNGSASTKLGKEAEV--VHWSTDGSL 265          
BLAST of Gchil3039.t1 vs. uniprot
Match: A0A0D0A8E5_9AGAM (Uncharacterized protein n=1 Tax=Suillus luteus UH-Slu-Lm8-n1 TaxID=930992 RepID=A0A0D0A8E5_9AGAM)

HSP 1 Score: 84.0 bits (206), Expect = 1.450e-14
Identity = 69/236 (29.24%), Postives = 108/236 (45.76%), Query Frame = 0
Query:   47 ESAVFAVSLADHGRFCVTGSGDGIIQVWDVRTGRRVGDSLQA--CGGVRKIVDVPKSNKIVSFGWDNVVRVWQIGDKGLT---SIASLVGHEGMVRAIAISPSGNCALSASNDKTIRVWDLSKADGTHTVLRGHEMYPAGVHFSPDGKLAMSRDPNEVRFWDISSGECLRVVSYERNYPLSPT----RLWRELWPE-EPSYASEDDDVKMF--WKRCSRKIWLAADNSVLATLDSE 270
            E  V +V+   H    VT S D   +VWD+ TG++VG+ L +  C  V KI   P    +VS GW+  + VW++            S  GHE ++R +A +P      SASND T+ VW  +        LR  E+ P  V +S  G+   +     +  WD ++GE L  +  +R Y ++ T    RL    W     S A+  D +K F       + + ++ + S LAT  ++
Sbjct:   33 EEWVSSVAFIPHTNLLVTSSADKTFRVWDLDTGKQVGEPLLSHECA-VWKIAVSPDGRWVVSGGWNGSILVWEVATNKTDLKREPVSFKGHEILLRGLAFAPDSETFASASNDMTVCVWKRAARQMVLGPLRLDEL-PNSVSYSFSGRKLAAGTDKHIIVWDATNGEELFKIQ-KRAYRIAFTPDSLRLVSSDWNNIRISDATTGDIIKQFDAHTETCQSLAISPNGSKLATTSAD 265          
BLAST of Gchil3039.t1 vs. uniprot
Match: UPI001B875573 (WD40-repeat-containing domain protein n=1 Tax=Suillus subalutaceus TaxID=48586 RepID=UPI001B875573)

HSP 1 Score: 76.6 bits (187), Expect = 5.290e-12
Identity = 68/240 (28.33%), Postives = 106/240 (44.17%), Query Frame = 0
Query:   47 ESAVFAVSLADHGRFCVTGSGDGIIQVWDVRTGRRVGDSL--QACGGVRKIVDVPKSNKIVSFGWDNVVRVWQIG-DKGLTSI----ASLVGHEGMVRAIAISPSGNCALSASNDKTIRVWDLSKADGTHTVLRGHEMYPAGVHFSPDGKLAMSRDPNEVRFWDISSGE-CLRVVSYERNYPLSPTRL------WRELWPEEPSYASEDDDVKMF--WKRCSRKIWLAADNSVLATLDSE 270
            E  V +V+        VT S D  ++VWD+ TG++VG+ L    C  V  +   P    I S GW+  + VW++  DK  T +     S  GHE ++R +  +P      SASND TI VW           LR  E+ P  V +S DGK   +     +  W+ ++GE  L++         +P  L      W ++     S A+  D +K F    +  + + +A + S  AT  S+
Sbjct:   32 EQWVSSVAFIPRTNLLVTSSADKTLRVWDLNTGKQVGEPLLNHDCA-VWMVAASPDGCWIASGGWNGSILVWEVATDK--TDVKREPVSFKGHEILLRDLIFAPGSETFASASNDLTICVWKSETGTIVLGPLRLDEL-PNSVSYSLDGKKLAAGTDKHIIVWNTTNGEELLKIPKRAFKIAFTPDSLRLVSGDWNDI---RISDAATGDIIKQFDAHTQTCQSLAIAPNGSKFATTSSD 264          
BLAST of Gchil3039.t1 vs. uniprot
Match: UPI0014885459 (protein kinase n=1 Tax=Alienimonas chondri TaxID=2681879 RepID=UPI0014885459)

HSP 1 Score: 74.3 bits (181), Expect = 4.520e-11
Identity = 49/172 (28.49%), Postives = 82/172 (47.67%), Query Frame = 0
Query:   64 TGSGDGIIQVWDVRTGRRVGDSLQACGGVRKIVDVPKSNKIVSFGWD----------NVVRVWQIGDKG----------LTSIASLVGHEGMVRAIAISPSGNCALSASNDKTIRVWDLSKADGTHTVLRGHEMYPAGVHFSPDGKLAM--SRDPNEVRFWDISSGECLRVV 213
            +GSGDG I++WD +TG  +        G +++   P    ++S G D          + +R+W++ + G           T +  L GH   V AIA+   G  A+S S +K +RVWD+       T+  G  +    V  + DG+ A+  + +P EVR++D+ SG   R +
Sbjct:  787 SGSGDGGIRLWDPQTGAALAGRSTLTSGAQRLAVSPDGRALLSAGGDPRTLRRDDGDHALRLWRLPEPGTADVPQPDSPFTLVRELAGHASAVNAIAVYDGGRRAVSGSEEKRMRVWDVQTGALLKTIETGTAV--KSVVVAADGRFAIVGTINPAEVRWYDLESGALDRRI 956          
BLAST of Gchil3039.t1 vs. uniprot
Match: A0A2P4PIP8_RHIID (Uncharacterized protein n=1 Tax=Rhizophagus irregularis (strain DAOM 181602 / DAOM 197198 / MUCL 43194) TaxID=747089 RepID=A0A2P4PIP8_RHIID)

HSP 1 Score: 70.9 bits (172), Expect = 1.040e-10
Identity = 37/104 (35.58%), Postives = 63/104 (60.58%), Query Frame = 0
Query:   59 GRFCVTGSGDGIIQVWDVRTGRRVGDSLQACGGVRKIVDVPKSNKIVSFGWDNVVRVWQIGDKGLTSIASLVGHEGMVRAIAISPSGNCALSASNDKTIRVWDL 162
            G+F  +GS D +I+++++R  + +G  LQ  G +  I    K++ + S   D  + +W+  D     + +L GH+G V ++A+ PSG  ALS SNDKT+R+W+L
Sbjct:  124 GKFLASGSTDEVIKLYNLRKRKELGSLLQHEGSITTIQFFNKTH-MFSGSEDGTICIWRTKD--WECLKTLKGHKGRVNSLAVHPSGKIALSVSNDKTVRLWNL 224          
BLAST of Gchil3039.t1 vs. uniprot
Match: A0A2P6TDV5_CHLSO (Receptor of activated kinase C component of 40S small ribosomal subunit isoform B n=3 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TDV5_CHLSO)

HSP 1 Score: 73.2 bits (178), Expect = 1.100e-10
Identity = 56/193 (29.02%), Postives = 87/193 (45.08%), Query Frame = 0
Query:   53 VSLADHGRFCVTGSGDGIIQVWDVRTG----RRVGDSLQACGGVRKIVDV------PKSNKIVSFGWDNVVRVWQIGDKGLTSIASLVGHEGMVRAIAISP--SGNCALSASNDKTIRVWDLSKADGTHTVLRGHEMYPAGVHFSPDGKLAMSRDPNEVRF-WDISSGECLRVVSYE-----RNYPLSPTRLW 227
            V ++  G+FC+TGS DG +++WD+ TG    R +G             DV        + +IVS   D  +++W    +   +I    GH   V  +  SP       +SA  DK ++VW L+     + ++ GH+ Y   V  SPDG L  S   + V   WD+S G+  R+ S +      +   SP R W
Sbjct:   71 VVISSDGQFCLTGSWDGTLRLWDITTGATTRRFLGHXXXXXXXXXXXKDVLSVAFSADNRQIVSGSRDKTIKLWNTLGECKYTIGEPDGHTEWVSCVRFSPVTQNPIIVSAGWDKAVKVWSLTNCKLRNNLV-GHQGYVNTVTVSPDGSLCASGGKDGVAMLWDLSEGK--RLYSLDAGDIIHSLCFSPNRYW 260          
BLAST of Gchil3039.t1 vs. uniprot
Match: A0A3E2HDA4_SCYLI (Uncharacterized protein (Fragment) n=1 Tax=Scytalidium lignicola TaxID=5539 RepID=A0A3E2HDA4_SCYLI)

HSP 1 Score: 72.8 bits (177), Expect = 1.350e-10
Identity = 51/178 (28.65%), Postives = 75/178 (42.13%), Query Frame = 0
Query:   44 ERKESAVFAVSLADHGRFCVTGSGDGIIQVWDVRTGRRVGDSLQACGGVRKIVDVPKSNKIVSFGWDNVVRVWQIGDKGLTSIASLVGHEGMVRAIAISPSGNCALSASNDKTIRVWDLS---------KAD---GTHTVLRGHEMYPAGVHFSPDGK-LAMSRDPNEVRFWDISSGE 208
            +R    +  ++ +  G+   + S DG+I +WD  TG     SL+    V   +  P   K+                       +L GH    R  AISP G     AS+DKT+R+WD+S         KAD    T  V  GH  Y   V FSP+ + LA   D  ++  WD++ G+
Sbjct:  648 KRHTKPISFLAFSSDGKIIASASSDGLICLWDGDTGTYQ-RSLEGPNSVVTTLFFPLDLKLKVLXXXXXXXXXXXXXXXXXDFMNLSGHNDWARGAAISPDGRLVALASDDKTVRIWDISDFTAGKNNVKADDEENTARVFHGHNDYVYSVAFSPEAQYLASGGDDYDIFIWDLAQGD 824          
BLAST of Gchil3039.t1 vs. uniprot
Match: A0A015LAS7_RHIIW (Mak11p n=8 Tax=Rhizophagus TaxID=1129544 RepID=A0A015LAS7_RHIIW)

HSP 1 Score: 70.9 bits (172), Expect = 3.740e-10
Identity = 37/104 (35.58%), Postives = 63/104 (60.58%), Query Frame = 0
Query:   59 GRFCVTGSGDGIIQVWDVRTGRRVGDSLQACGGVRKIVDVPKSNKIVSFGWDNVVRVWQIGDKGLTSIASLVGHEGMVRAIAISPSGNCALSASNDKTIRVWDL 162
            G+F  +GS D +I+++++R  + +G  LQ  G +  I    K++ + S   D  + +W+  D     + +L GH+G V ++A+ PSG  ALS SNDKT+R+W+L
Sbjct:  124 GKFLASGSTDEVIKLYNLRKRKELGSLLQHEGSITTIQFFNKTH-MFSGSEDGTICIWRTKD--WECLKTLKGHKGRVNSLAVHPSGKIALSVSNDKTVRLWNL 224          
BLAST of Gchil3039.t1 vs. uniprot
Match: A3GF77_PICST (Essential for cell growth and replication of M dsRNA virus contains four beta-transducin repeats (Fragment) n=1 Tax=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) TaxID=322104 RepID=A3GF77_PICST)

HSP 1 Score: 70.5 bits (171), Expect = 5.130e-10
Identity = 53/173 (30.64%), Postives = 92/173 (53.18%), Query Frame = 0
Query:   60 RFCVTGSGDGIIQVWDVRTGRRVGDSLQACGGVRKI-------VDVP----KSNK-IVSFGWDNVVRVWQIGDKGLTSIASLVGHEGMVRAIAISPSGNCALSASNDKTIRVWDLSKADGTHTV-LRGHE-MYPAG--VHFSPDGKLAMSRDPNEVRFWDISSGECLRVVSYE 216
            R+ VTGS D  I+++D++  + +G  L   G +  +       VD P    KS K ++S   D  + +W+  D    +  +L GH G V  +AI PSG  A+S S DKTIR+W+L  A     + ++G + +  +G  V +S DGK  +    N++  ++ SS + ++ +S++
Sbjct:   62 RYLVTGSNDEHIRIYDLQKRKELGHLLSHEGTITTLKFSKEVSVDHPEFAEKSGKWLLSGSEDGKIIIWRTKD--WETFGTLKGHTGKVNDLAIHPSGRVAISVSQDKTIRLWNLMTAKKAAVLKIKGKDHLGQSGDFVRWSVDGKYFLVGLLNQILVYNTSSAKIVKKISFK 232          
BLAST of Gchil3039.t1 vs. uniprot
Match: UPI00193D818D (WD repeat-containing protein 81-like n=1 Tax=Nilaparvata lugens TaxID=108931 RepID=UPI00193D818D)

HSP 1 Score: 70.1 bits (170), Expect = 6.020e-10
Identity = 60/187 (32.09%), Postives = 89/187 (47.59%), Query Frame = 0
Query:  126 IASLVGHEGMVRAIAISPSGNCALSASNDKTIRVWDL-SKADGTHTVL-----RGHEMYPAGVHFSPDGKLAMSRDPNEVRFWDISSGECLRVVSYERNYPLSPTRLWRELWPEEPSY----ASEDDDVKMFWKRC-----SRKIWLAADNSVLATLDSEILGGSYCQQRHILCVGLANGRLGIVQL 297
            + S  GH   VRA+ +  + N  LSAS DKT+++W L S+ DGT T        GH      + F P  +LA S D +EV  WD   G   R+VS+  +  L P  L + L    PS+    A+ D  +K+F  R        K+ + A   V+  +       +  + RH + VG A+G+L I+ L
Sbjct:  123 LQSFGGHSNSVRALHVLDNENSFLSASRDKTVKLWSLRSQGDGTSTTAPQWTYTGHRKCVVSLAFVPGVRLAASSD-SEVHLWDPFVG---RLVSHSDSRQLPPVNLLKAL--PAPSHCLLAATMDATLKLFDARSLINNGEIKVSMNATGGVIRCM-------AVSESRHWVAVGQASGQLTIIDL 296          
The following BLAST results are available for this feature:
BLAST of Gchil3039.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2H3K353_WOLCO1.140e-1534.03WD40 repeat-like protein n=1 Tax=Wolfiporia cocos ... [more]
A0A0D0A8E5_9AGAM1.450e-1429.24Uncharacterized protein n=1 Tax=Suillus luteus UH-... [more]
UPI001B8755735.290e-1228.33WD40-repeat-containing domain protein n=1 Tax=Suil... [more]
UPI00148854594.520e-1128.49protein kinase n=1 Tax=Alienimonas chondri TaxID=2... [more]
A0A2P4PIP8_RHIID1.040e-1035.58Uncharacterized protein n=1 Tax=Rhizophagus irregu... [more]
A0A2P6TDV5_CHLSO1.100e-1029.02Receptor of activated kinase C component of 40S sm... [more]
A0A3E2HDA4_SCYLI1.350e-1028.65Uncharacterized protein (Fragment) n=1 Tax=Scytali... [more]
A0A015LAS7_RHIIW3.740e-1035.58Mak11p n=8 Tax=Rhizophagus TaxID=1129544 RepID=A0A... [more]
A3GF77_PICST5.130e-1030.64Essential for cell growth and replication of M dsR... [more]
UPI00193D818D6.020e-1032.09WD repeat-containing protein 81-like n=1 Tax=Nilap... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 294..299
NoneNo IPR availablePANTHERPTHR44129:SF5WD REPEAT-CONTAINING PROTEIN POP1coord: 100..214
NoneNo IPR availablePANTHERPTHR44129FAMILY NOT NAMEDcoord: 100..214
NoneNo IPR availablePANTHERPTHR44129FAMILY NOT NAMEDcoord: 40..175
NoneNo IPR availablePANTHERPTHR44129:SF5WD REPEAT-CONTAINING PROTEIN POP1coord: 40..175
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..29
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 30..299
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..17
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 43..80
score: 9.651964
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 129..163
score: 12.446495
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 62..76
score: 36.59
coord: 104..118
score: 29.86
coord: 148..162
score: 37.05
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 122..161
e-value: 3.2E-9
score: 46.7
coord: 165..203
e-value: 7.1
score: 11.6
coord: 36..75
e-value: 6.1E-4
score: 29.1
coord: 79..117
e-value: 120.0
score: 3.8
IPR001680WD40 repeatPFAMPF00400WD40coord: 126..161
e-value: 1.8E-6
score: 28.6
coord: 50..75
e-value: 0.099
score: 13.6
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 129..170
score: 15.955617
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 43..84
score: 12.346452
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 172..212
score: 9.071468
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 8..224
e-value: 1.2E-40
score: 141.3
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 148..162
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 62..76
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 45..215

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000106_piloncontigtig00000106_pilon:1311881..1312780 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil3039.t1Gchil3039.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000106_pilon 1311881..1312780 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil3039.t1 ID=Gchil3039.t1|Name=Gchil3039.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=300bp
MGEPIPVASAVCGLAFIDSDLIAAATSLGIEVIDISEHSACSIERKESAV
FAVSLADHGRFCVTGSGDGIIQVWDVRTGRRVGDSLQACGGVRKIVDVPK
SNKIVSFGWDNVVRVWQIGDKGLTSIASLVGHEGMVRAIAISPSGNCALS
ASNDKTIRVWDLSKADGTHTVLRGHEMYPAGVHFSPDGKLAMSRDPNEVR
FWDISSGECLRVVSYERNYPLSPTRLWRELWPEEPSYASEDDDVKMFWKR
CSRKIWLAADNSVLATLDSEILGGSYCQQRHILCVGLANGRLGIVQLMQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020472G-protein_beta_WD-40_rep
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR036322WD40_repeat_dom_sf