Gchil2992.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil2992.t1
Unique NameGchil2992.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length123
Homology
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BLAST of Gchil2992.t1 vs. uniprot
Match: A0A2V3IUM5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUM5_9FLOR)

HSP 1 Score: 97.4 bits (241), Expect = 9.510e-24
Identity = 57/119 (47.90%), Postives = 77/119 (64.71%), Query Frame = 0 
Query:    3 AFVGFCP-SPFRASAFTGAQCKGFRRLNRTYPRRSTSAVVVAVTQPITSTALLLTENITRRIFLGGISIVVSGILGVVFVAYFVARNYDEMEAEFQNRDGAVERLKALEELKAARKREK 120
            AFV F P S  R S FTG +C   + +NR  P+R    + VAV  P T   LL+ ++IT RIF+GG+ IV SGI+GV   AY V++N+D  E EFQNRDGA++R + L+EL+   K +K
Sbjct:    4 AFVSFLPFSQSRCSTFTGTRCVAPQTVNRV-PKRRAVHLPVAVADPFTPGTLLIAKDITFRIFMGGLGIVFSGIVGVAVTAYLVSKNFDTFEEEFQNRDGAIDRRRRLDELREKEKNKK 121
The following BLAST results are available for this feature:
BLAST of Gchil2992.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IUM5_9FLOR9.510e-2447.90Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 106..122
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..20
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 36..56
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..35
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..12
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 87..122
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 63..86
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 57..62
NoneNo IPR availableTMHMMTMhelixcoord: 63..85

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000106_piloncontigtig00000106_pilon:710636..711107 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil2992.t1Gchil2992.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000106_pilon 710636..711107 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil2992.t1 ID=Gchil2992.t1|Name=Gchil2992.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=123bp
MFAFVGFCPSPFRASAFTGAQCKGFRRLNRTYPRRSTSAVVVAVTQPITS
TALLLTENITRRIFLGGISIVVSGILGVVFVAYFVARNYDEMEAEFQNRD
GAVERLKALEELKAARKREKQS*
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