Gchil7533.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7533.t1
Unique NameGchil7533.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length76
Homology
[Close]
BLAST of Gchil7533.t1 vs. uniprot
Match: A0A2V3J2G3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2G3_9FLOR)

HSP 1 Score: 75.5 bits (184), Expect = 2.040e-16
Identity = 42/73 (57.53%), Postives = 51/73 (69.86%), Query Frame = 0 
Query:    1 MSKFVKLFVLYASSFASLLCGAHLIHITVKPDMKLDSEHQPNKQPTDPEDPEHQKKKKASDKPLISIAVPQTT 73
            MSK  +L VLY +SFAS+L GAHL+HITVKPDM L++      Q T P++      K AS KPLISIA+PQTT
Sbjct:    1 MSKLARLIVLYTASFASMLSGAHLVHITVKPDMTLNASDTTQAQETAPDENNSVTAKAASSKPLISIAIPQTT 73
The following BLAST results are available for this feature:
BLAST of Gchil7533.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J2G3_9FLOR2.040e-1657.53Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 32..75
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 32..62
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..75
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000007_piloncontigtig00000007_pilon:1787170..1787481 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7533.t1Gchil7533.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000007_pilon 1787170..1787481 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7533.t1 ID=Gchil7533.t1|Name=Gchil7533.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=76bp
MSKFVKLFVLYASSFASLLCGAHLIHITVKPDMKLDSEHQPNKQPTDPED
PEHQKKKKASDKPLISIAVPQTTKS*
back to top